Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,088,033 T→C T76A (ACC→GCC)  yeeY ← putative DNA‑binding transcriptional regulator YeeY

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,088,0330TC98.7% 273.3 / ‑5.4 78T76A (ACC→GCC) yeeYputative DNA‑binding transcriptional regulator YeeY
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (33/44);  minor base G (1/0);  total (34/44)
Fisher's exact test for biased strand distribution p-value = 4.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GATGTTGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGTATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGAACGGTGTAACTCAGAGCGGACG  >  NC_000913/2087904‑2088167
                                                                                                                                 |                                                                                                                                      
gatgTTGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGGATGCAGAACt                                                                                                                              >  1:948757/1‑140 (MQ=255)
 atgTTGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACtt                                                                                                                             >  2:95446/1‑140 (MQ=255)
   gTTGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTcc                                                                                                                           <  2:410266/140‑1 (MQ=255)
   gTTGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTcc                                                                                                                           <  1:95446/140‑1 (MQ=255)
    ttGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTccc                                                                                                                          >  1:857692/1‑140 (MQ=255)
     tGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCg                                                                                                                         >  1:602578/1‑140 (MQ=255)
     tGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCg                                                                                                                         >  1:359560/1‑140 (MQ=255)
     tGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCg                                                                                                                         >  2:872967/1‑140 (MQ=255)
       aTAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTcc                                                                                                                           >  1:877865/1‑136 (MQ=255)
       aTAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTcc                                                                                                                           <  2:877865/136‑1 (MQ=255)
       aTAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGcc                                                                                                                       <  1:928916/140‑1 (MQ=255)
       aTAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGcc                                                                                                                       >  1:327582/1‑140 (MQ=255)
       aTAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGcc                                                                                                                       >  1:404657/1‑140 (MQ=255)
       aTAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAACCTTCATGCAGTTTGATCGCCTGCTTTTCAAGTTCCCGCACGGCATGCAGAACTTCCCGcc                                                                                                                       >  2:496772/1‑140 (MQ=255)
         aaaaaGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCt                                                                                                                     >  1:619599/1‑140 (MQ=255)
                            cgcAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTc                                                                                                  >  1:604883/1‑140 (MQ=255)
                                 gCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTg                                                                                             >  2:1012098/1‑140 (MQ=255)
                                 gCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTg                                                                                             <  2:857692/140‑1 (MQ=255)
                                     agaAAAAGGAAACGTGTCGTCCGCGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTATCCGGTGCggg                                                                                         >  1:267131/1‑140 (MQ=255)
                                     agaAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCggg                                                                                         >  2:712058/1‑140 (MQ=255)
                                      gaAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGt                                                                                        <  1:606891/140‑1 (MQ=255)
                                           aGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAAtt                                                                                   <  2:604883/140‑1 (MQ=255)
                                              aaaCGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAg                                                                                <  2:106404/140‑1 (MQ=255)
                                               aaCGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAgc                                                                               >  1:432984/1‑140 (MQ=255)
                                               aaCGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAgc                                                                               <  2:301117/140‑1 (MQ=255)
                                                  gtgtCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGcgcg                                                                            <  2:602578/140‑1 (MQ=255)
                                                   tgtCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCgg                                                                           <  2:808495/140‑1 (MQ=255)
                                                   tgtCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCgg                                                                           <  1:591484/140‑1 (MQ=255)
                                                     tcgtcCACGCCAATCACCAGCTCGTTTTCCGAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGgtg                                                                         >  2:609349/1‑140 (MQ=255)
                                                       gtcCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAgcg                                                                              >  2:271201/1‑133 (MQ=255)
                                                       gtcCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAgcg                                                                              <  1:271201/133‑1 (MQ=255)
                                                       gtcCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTc                                                                       >  2:729116/1‑140 (MQ=255)
                                                            cGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTa                                                                  >  1:838989/1‑140 (MQ=255)
                                                            cGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTa                                                                  <  1:279552/140‑1 (MQ=255)
                                                                  tCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCa                                                            >  2:323033/1‑140 (MQ=255)
                                                                  tCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCa                                                            <  1:872967/140‑1 (MQ=255)
                                                                    aCCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTATCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAg                                                          <  2:267131/140‑1 (MQ=255)
                                                                       aGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCaa                                                       <  1:631034/140‑1 (MQ=255)
                                                                       aGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCaa                                                       <  1:150589/140‑1 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGc                                                                    >  2:591575/1‑125 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGc                                                                    <  2:374467/125‑1 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGc                                                                    >  1:374467/1‑125 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGc                                                                    <  1:591575/125‑1 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAAtt                                                     <  2:575356/140‑1 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAAtt                                                     <  2:931048/140‑1 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAAtt                                                     >  1:575356/1‑140 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAAtt                                                     >  1:931048/1‑140 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAAtt                                                     <  2:619599/140‑1 (MQ=255)
                                                                         cTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAAtt                                                     <  1:729116/140‑1 (MQ=255)
                                                                             ttttCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAat                                                 >  2:500576/1‑140 (MQ=255)
                                                                             ttttCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAat                                                 >  1:751859/1‑140 (MQ=255)
                                                                                  ccAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTaa                                            <  2:981742/140‑1 (MQ=255)
                                                                                    aGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCAAGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAgg                                          <  2:948757/140‑1 (MQ=255)
                                                                                     gCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGt                                         <  1:148912/140‑1 (MQ=255)
                                                                                     gCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGt                                         <  1:500576/140‑1 (MQ=255)
                                                                                        ttCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGc                                      >  2:506419/1‑140 (MQ=255)
                                                                                          cATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCtt                                    >  1:656343/1‑140 (MQ=255)
                                                                                             gCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTcc                                 <  1:11722/140‑1 (MQ=255)
                                                                                             gCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTcc                                 <  2:634254/140‑1 (MQ=255)
                                                                                               aGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAg                               <  2:533455/140‑1 (MQ=255)
                                                                                                gTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGc                              >  2:552418/1‑140 (MQ=255)
                                                                                                 tttGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCt                             >  1:950046/1‑140 (MQ=255)
                                                                                                   tGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGt                                         >  1:871494/1‑126 (MQ=255)
                                                                                                   tGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGt                                         <  2:871494/126‑1 (MQ=255)
                                                                                                   tGATCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTtg                           >  2:1001803/1‑140 (MQ=255)
                                                                                                     aTCGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTtgtg                         <  1:609349/140‑1 (MQ=255)
                                                                                                       cGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGaa                       <  2:656343/140‑1 (MQ=255)
                                                                                                       cGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGaa                       <  1:863813/140‑1 (MQ=255)
                                                                                                       cGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGaa                       <  2:404657/140‑1 (MQ=255)
                                                                                                       cGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGaa                       <  1:506419/140‑1 (MQ=255)
                                                                                                       cGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGaa                       <  2:432984/140‑1 (MQ=255)
                                                                                                       cGCCTGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGaa                       <  1:323033/140‑1 (MQ=255)
                                                                                                       cGCCTGCTTTTCAAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGaa                       <  1:496772/140‑1 (MQ=255)
                                                                                                           tGCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGAACGgt                   >  2:864210/1‑140 (MQ=255)
                                                                                                            gCTTTTCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGAACGgtg                  <  2:838989/140‑1 (MQ=255)
                                                                                                                ttCCAGTTCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGAACGGTATAAc              <  1:552418/140‑1 (MQ=255)
                                                                                                                      ttCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGaa                       >  2:6893/1‑125 (MQ=255)
                                                                                                                      ttCCCGCACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGaa                       <  1:6893/125‑1 (MQ=255)
                                                                                                                            cACGGCATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGAACGGTGTAACTCAGAGCGGACg  <  1:864210/140‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                      
GATGTTGATAAAAAGCTTCAATGAGTGGCGCAAGCAGAGAAAAAGGAAACGTGTCGTCCACGCCAATCACCAGCTCGTTTTCCCAGCCTTCATGCAGTTTGATCGCCTGCTTTTCCAGTTCCCGCACGGTATGCAGAACTTCCCGCCCTTTCTCTAATAACATTTTTCCGGTGCGGGTGAATTTAGCGCGGTGTCCGCTACGATCAAGCAATTGAATATTAAGGTCGCTTTCCAGCTTGTGAACGGTGTAACTCAGAGCGGACG  >  NC_000913/2087904‑2088167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: