Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,595,790	Δ1 bp	coding (62/915 nt)	lgoR ←	putative DNA‑binding transcriptional regulator LgoR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,595,787	0	C	.	100.0%	264.6 / NA	63	coding (65/915 nt)	lgoR	putative DNA‑binding transcriptional regulator LgoR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (27/36);  total (27/36)

GCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGA  >  NC_000913/4595649‑4595921                                                                                                                                           |                                                                                                                                       gcAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcc                                                                                                                                       <  2:846601/140‑1 (MQ=255)   aaTAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccg                                                                                                                                     <  2:1093388/140‑2 (MQ=255)   aaTAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccg                                                                                                                                     >  1:388484/1‑139 (MQ=255)      aaCATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccgcgc                                                                                                                                  <  2:593271/140‑5 (MQ=255)       aCATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGcc                                                                                                                                <  2:1125295/140‑1 (MQ=255)       aCATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGcc                                                                                                                                <  1:876692/140‑1 (MQ=255)        cATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCa                                                                                                                               <  1:988123/140‑1 (MQ=255)         aTAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCat                                                                                                                              <  2:770354/140‑1 (MQ=255)           aGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCGCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCatat                                                                                                                            >  2:319784/1‑140 (MQ=255)           aGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCatat                                                                                                                            >  1:81614/1‑140 (MQ=255)           aGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCatat                                                                                                                            <  1:725272/140‑1 (MQ=255)           aGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCatat                                                                                                                            >  2:488302/1‑140 (MQ=255)             tCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcc                                                                                                                                       >  2:858417/1‑128 (MQ=255)             tCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcc                                                                                                                                       <  1:858417/128‑1 (MQ=255)                tttCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATAtcatca                                                                                                                       >  1:842837/1‑140 (MQ=255)                 ttCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCaa                                                                                                                      >  1:527816/1‑140 (MQ=255)                  tCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCAGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAAt                                                                                                                     >  1:1004259/1‑140 (MQ=255)                   ccAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATg                                                                                                                    >  1:206600/1‑140 (MQ=255)                    cAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGa                                                                                                                   <  2:206600/140‑1 (MQ=255)                    cAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGa                                                                                                                   <  2:758089/140‑1 (MQ=255)                    cAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGa                                                                                                                   <  1:422027/140‑1 (MQ=255)                    cAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGa                                                                                                                   <  2:388484/140‑1 (MQ=255)                      aCCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGAcc                                                                                                                 <  1:1016296/140‑1 (MQ=255)                      aCCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGAcc                                                                                                                 <  2:81614/140‑1 (MQ=255)                      aCCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGAcc                                                                                                                 <  2:860718/140‑1 (MQ=255)                      aCCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATAATCAATGAcc                                                                                                                 <  1:688216/140‑1 (MQ=255)                        cTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTg                                                                                                               <  2:527816/140‑1 (MQ=255)                          gCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGt                                                                                                             <  2:866553/140‑1 (MQ=255)                          gCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGt                                                                                                             <  2:328347/140‑1 (MQ=255)                           cGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGtt                                                                                                            >  1:465901/1‑140 (MQ=255)                           cGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGtt                                                                                                            >  1:46401/1‑140 (MQ=255)                             tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTaa                                                                                                          >  1:38995/1‑140 (MQ=255)                               aaGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATc                                                                                                        <  2:842837/140‑1 (MQ=255)                                aGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATca                                                                                                       <  2:465901/140‑1 (MQ=255)                                    gccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACAtt                                                                                                   <  1:316171/140‑1 (MQ=255)                                     ccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATtg                                                                                                  >  2:1037477/1‑140 (MQ=255)                                     ccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATtg                                                                                                  >  2:54028/1‑140 (MQ=255)                                      cgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATtgt                                                                                                 >  2:918741/1‑140 (MQ=255)                                        cATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTgg                                                                                               <  1:1128049/140‑1 (MQ=255)                                           tCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGt                                                                                            <  2:38995/140‑1 (MQ=255)                                             gcgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTaa                                                                                          <  1:918741/140‑1 (MQ=255)                                                      gCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa                                                                                 <  2:383496/140‑1 (MQ=255)                                                        tGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc                                                                               <  1:398514/140‑1 (MQ=255)                                                           gaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGAc                                                                            <  1:1037477/140‑1 (MQ=255)                                                              tatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa                                                                         >  1:940890/1‑140 (MQ=255)                                                              tatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa                                                                         >  1:541862/1‑140 (MQ=255)                                                                  aCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAtt                                                                     >  1:547076/1‑140 (MQ=255)                                                                   cGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAttt                                                                    <  1:488302/140‑1 (MQ=255)                                                                   cGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAttt                                                                    <  1:54028/140‑1 (MQ=255)                                                                     cgcTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTtc                                                                  <  1:319784/138‑1 (MQ=255)                                                                      aCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAGTGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTtcc                                                                 >  2:176670/1‑140 (MQ=255)                                                                      aCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAttt                                                                    >  1:815019/1‑137 (MQ=255)                                                                      aCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAttt                                                                    <  2:815019/137‑1 (MQ=255)                                                                         gtggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTtcctcc                                                              >  2:882266/1‑140 (MQ=255)                                                                             tgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTtgt                                                          <  2:1004259/140‑1 (MQ=255)                                                                                ggCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAg                                                       >  2:217565/1‑140 (MQ=255)                                                                                  cTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTc                                                     >  1:680852/1‑140 (MQ=255)                                                                                                  ccGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGAttt                                     >  2:749778/1‑140 (MQ=255)                                                                                                    gCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTaa                                   <  2:940890/140‑1 (MQ=255)                                                                                                     ccAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTaaa                                  <  1:663231/140‑1 (MQ=255)                                                                                                     ccAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTaaa                                  <  2:680852/140‑1 (MQ=255)                                                                                                     ccAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAATTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTaaa                                  <  1:192934/140‑1 (MQ=255)                                                                                                       aGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTAAAAc                                <  2:1125126/140‑1 (MQ=255)                                                                                                            aCTTTGCGATGGAAGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTAAAACAtttt                           <  2:382721/140‑1 (MQ=255)                                                                                                                        aaGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGtt               >  1:332157/1‑140 (MQ=255)                                                                                                                        aaGTGGGGAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGtt               >  2:45047/1‑140 (MQ=255)                                                                                                                            ggggAAGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTca           >  2:195411/1‑140 (MQ=255)                                                                                                                                 aGGGATATGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACaaaa      >  1:628032/1‑140 (MQ=255)                                                                                                                                     atatGA‑CCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGa  >  2:900768/1‑140 (MQ=255)                                                                                                                                           |                                                                                                                                       GCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCTCCTTGTGAGTCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGA  >  NC_000913/4595649‑4595921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑