Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 301,581 A→G L103L (TTA→CTA)  paoB ← aldehyde dehydrogenase, FAD‑binding subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913301,5810AG100.0% 139.4 / NA 41L103L (TTA→CTA) paoBaldehyde dehydrogenase, FAD‑binding subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (21/20);  total (21/20)

CGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAACTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCACCCGCGTCGGTCACTT  >  NC_000913/301451‑301709
                                                                                                                                  |                                                                                                                                
cGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGa                                                                                                                         <  2:469259/140‑1 (MQ=255)
             cAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAg                                                                                                             >  1:707497/1‑139 (MQ=255)
             cAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAg                                                                                                             <  2:707497/139‑1 (MQ=255)
                   ccgcGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAGATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGgcg                                                                                                      <  1:363453/140‑1 (MQ=255)
                   ccgcGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGgcg                                                                                                      <  2:773027/140‑1 (MQ=255)
                   ccgcGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGgcg                                                                                                      <  2:52601/140‑1 (MQ=255)
                   ccgcGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGgcg                                                                                                      >  2:72845/1‑140 (MQ=255)
                   ccgcGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGgcg                                                                                                      >  2:718198/1‑140 (MQ=255)
                            cGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGt                                                                                             <  2:840685/140‑1 (MQ=255)
                              cTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTAc                                                                                           >  1:1081367/1‑140 (MQ=255)
                                         gcgcTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTa                                                                                            <  2:1075849/128‑1 (MQ=255)
                                         gcgcTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTa                                                                                            >  1:1075849/1‑128 (MQ=255)
                                         gcgcTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAGTCac                                                                                >  2:1057089/1‑140 (MQ=255)
                                         gcgcTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCac                                                                                >  2:92884/1‑140 (MQ=255)
                                                ttGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGacgcac                                                                         <  2:973956/140‑1 (MQ=255)
                                                     gggCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCt                                                                    >  2:1049242/1‑140 (MQ=255)
                                                          gATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGa                                                               <  1:1107247/140‑1 (MQ=255)
                                                          gATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGa                                                               >  2:1051648/1‑140 (MQ=255)
                                                           aTTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAg                                                              >  1:514100/1‑140 (MQ=255)
                                                                     tAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTc                                                    >  1:562861/1‑140 (MQ=255)
                                                                       aaaaTAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCgg                                                  <  2:1081367/140‑1 (MQ=255)
                                                                       aaaaTAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCgg                                                  <  1:1049242/140‑1 (MQ=255)
                                                                         aaTAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGgtg                                                <  1:1051648/140‑1 (MQ=255)
                                                                              gggCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCg                                           >  1:156125/1‑140 (MQ=255)
                                                                               ggCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGt                                          >  2:618312/1‑140 (MQ=255)
                                                                                 cAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTAc                                        <  1:1057089/140‑1 (MQ=255)
                                                                                 cAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTAc                                        <  1:72845/140‑1 (MQ=255)
                                                                                    cgcgTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAg                                     >  2:1002880/1‑140 (MQ=255)
                                                                                     gcgTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGt                                    >  1:910914/1‑140 (MQ=255)
                                                                                         gcgcTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTgcgc                                >  2:981120/1‑140 (MQ=255)
                                                                                                     aTTACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGcc                    >  1:14222/1‑140 (MQ=255)
                                                                                                       tACCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCa                  >  1:951885/1‑140 (MQ=255)
                                                                                                        aCCTGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCAc                 <  2:773336/140‑1 (MQ=255)
                                                                                                           tGCGGTGGTTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCACCcg              <  2:951885/140‑1 (MQ=255)
                                                                                                                 ggtTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCACCCGCGTCgg        <  1:92884/140‑1 (MQ=255)
                                                                                                                  gtTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCTGATGCGCAGCCCACCCGCGTCGGt       <  1:423518/140‑1 (MQ=255)
                                                                                                                  gtTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCACCCGCGTCGGt       <  1:981120/140‑1 (MQ=255)
                                                                                                                  gtTGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCACCCGCGTCGGt       >  2:23783/1‑140 (MQ=255)
                                                                                                                   ttGCCTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCACCCGCGTCGGTc      >  2:652676/1‑140 (MQ=255)
                                                                                                                       cTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCACCCGCGTCGGTCACtt  >  2:715409/1‑140 (MQ=255)
                                                                                                                       cTGATTACGTAGCTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCACCCGCGTCGGTCACtt  <  2:14222/140‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                
CGGCTAAAGCCTTCAAGCGCCGCGCAGCCGCTCCCGGGCAGGCGCTTATTGCAGGGCTGATTGGTGTCGTAAAAATAGGGGCAGCGCGTGCGCTGGAGCAGATTACCTGCGGTGGTTGCCTGATTACGTAACTGACCAGACGCGCCAGCGAGCAGGGCGCGGGAGAGTACCGCGTAATCACGACGCACGCGCTCGTGAGCCGCCAGGTCGGTGTTCCGTACCAGTGCGCCGATGCGCAGCCCACCCGCGTCGGTCACTT  >  NC_000913/301451‑301709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: