Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,568,375	0	T	C	68.7%	85.4 / 52.3	67	H150R (CAC→CGC)	yddW	putative lipoprotein YddW
Reads supporting (aligned to +/- strand):  ref base T (10/11);  new base C (26/20);  total (36/31)
Fisher's exact test for biased strand distribution p-value = 6.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.30e-01
Rejected as consensus: Frequency below/above cutoff threshold.

TCCAGTCGCGGTGTTGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGAC  >  NC_000913/1568238‑1568508                                                                                                                                          |                                                                                                                                      tCCAGTCGCGGTGTTGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCgg                                                                                                                                     >  1:32395/1‑140 (MQ=255)    aGTCGCGGTGTTGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCt                                                                                                                                  >  1:742363/1‑140 (MQ=255)      tCGCGGTGTTGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTtc                                                                                                                                >  1:243962/1‑140 (MQ=255)      tCGCGGTGTTGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTtc                                                                                                                                >  1:923085/1‑140 (MQ=255)        gcgGTGTTGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTtcgt                                                                                                                              <  2:407078/140‑1 (MQ=255)        gcgGTGTTGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTtcgt                                                                                                                              <  1:723330/140‑1 (MQ=255)         cgGTGTCGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTtcgtc                                                                                                                             <  2:253913/140‑1 (MQ=255)          ggTGTTGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTtcgtcg                                                                                                                            >  2:213437/1‑140 (MQ=255)                      aGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGc                                                                                                                >  1:259862/1‑140 (MQ=255)                      aGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGc                                                                                                                >  1:399123/1‑140 (MQ=255)                      aGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGc                                                                                                                >  1:431354/1‑140 (MQ=255)                       gACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCa                                                                                                               <  2:742363/140‑1 (MQ=255)                        aCGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAg                                                                                                              >  1:7943/1‑140 (MQ=255)                           cTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCgg                                                                                                           >  2:636582/1‑140 (MQ=255)                           cTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCgg                                                                                                           >  2:183248/1‑140 (MQ=255)                           cTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCgg                                                                                                           >  1:668981/1‑140 (MQ=255)                              gCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATc                                                                                                        >  2:841574/1‑140 (MQ=255)                                         agaCAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGAt                                                                                             <  2:923085/140‑1 (MQ=255)                                          gaCAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGAtt                                                                                            <  1:132110/140‑1 (MQ=255)                                             agagTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTc                                                                                         >  2:4155/1‑140 (MQ=255)                                               agTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGAt                                                                                             <  2:235343/134‑1 (MQ=255)                                               agTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGAt                                                                                             >  1:235343/1‑134 (MQ=255)                                               agTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGAt                                                                                             <  2:778483/134‑1 (MQ=255)                                               agTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGAt                                                                                             >  1:778483/1‑134 (MQ=255)                                               agTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCAc                                                                                       <  1:399643/140‑1 (MQ=255)                                                gTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCAcc                                                                                      >  2:43560/1‑140 (MQ=255)                                                 tGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCa                                                                                     >  2:203256/1‑140 (MQ=255)                                                   cTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAAt                                                                                   >  1:452157/1‑140 (MQ=255)                                                          gTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCg                                                                            <  1:4155/140‑1 (MQ=255)                                                           ttCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCgg                                                                           >  2:534669/1‑140 (MQ=255)                                                              ccTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCa                                                                        >  1:105577/1‑140 (MQ=255)                                                              ccTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCa                                                                        <  1:636582/140‑1 (MQ=255)                                                              ccTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCa                                                                        <  1:43560/140‑1 (MQ=255)                                                              ccTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCa                                                                        <  2:259862/140‑1 (MQ=255)                                                              ccTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCa                                                                        >  2:868256/1‑140 (MQ=255)                                                                tGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATa                                                                      >  1:96550/1‑140 (MQ=255)                                                                tGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATa                                                                      >  2:189009/1‑140 (MQ=255)                                                                tGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTATCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATa                                                                      >  2:666611/1‑140 (MQ=255)                                                                  aTAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAg                                                                    >  1:791192/1‑140 (MQ=255)                                                                    aGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGAt                                                                  <  1:534669/140‑1 (MQ=255)                                                                     gTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATc                                                                 >  1:53396/1‑140 (MQ=255)                                                                                cGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCa                                                      >  2:467240/1‑140 (MQ=255)                                                                                  tATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCaaa                                                    >  2:949818/1‑140 (MQ=255)                                                                                          gATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGa                                            <  1:365169/140‑1 (MQ=255)                                                                                           aTACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGAt                                           <  2:105577/140‑1 (MQ=255)                                                                                            tACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATg                                          >  1:468396/1‑140 (MQ=255)                                                                                            tACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATg                                          >  2:64975/1‑140 (MQ=255)                                                                                              cgcgATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGc                                        <  1:183248/140‑1 (MQ=255)                                                                                                cgATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCca                                      <  1:841574/140‑1 (MQ=255)                                                                                                cgATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCca                                      <  2:53396/140‑1 (MQ=255)                                                                                                cgATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCca                                      <  2:791192/140‑1 (MQ=255)                                                                                                cgATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCca                                      <  1:189009/140‑1 (MQ=255)                                                                                                cgATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCca                                      <  2:399123/140‑1 (MQ=255)                                                                                                cgATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCca                                      <  1:868256/140‑1 (MQ=255)                                                                                                   tAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGa                                            <  1:604591/131‑1 (MQ=255)                                                                                                   tAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGa                                            >  2:604591/1‑131 (MQ=255)                                                                                                          tAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTa                            <  2:243962/140‑1 (MQ=255)                                                                                                             aCCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAggg                                 <  2:960506/132‑1 (MQ=255)                                                                                                             aCCAGGCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAggg                                 >  1:960506/1‑132 (MQ=255)                                                                                                                 ggCGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCg                     >  1:355468/1‑140 (MQ=255)                                                                                                                   cGTGTACTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGc                   <  1:467240/140‑1 (MQ=255)                                                                                                                         cTTTCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGAcc             <  1:203256/140‑1 (MQ=255)                                                                                                                            tCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGc                   >  2:4898/1‑131 (MQ=255)                                                                                                                            tCATCCCACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGc                   <  1:4898/131‑1 (MQ=255)                                                                                                                                 ccACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCGGGCTTGCCCTGGaaaaa     <  2:668981/140‑1 (MQ=255)                                                                                                                                 ccACGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGaaaaa     <  2:431354/140‑1 (MQ=255)                                                                                                                                   aCGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGa   <  1:666611/140‑1 (MQ=255)                                                                                                                                    cGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGAc  <  2:355468/140‑1 (MQ=255)                                                                                                                                    cGCTTGCGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGAc  >  2:118145/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                                      TCCAGTCGCGGTGTTGCACATAGACGCTCGCCGGTTGTTGAGACAGAGTGCTATTCAGTTCCCTGATAGTACCGGGCTTCGTATTAACCGATACGCGATAGGGGTTAAACCAGGCGTGTACTTTCATCCCACGCTTGTGGGCTTCGTCGAGCATAAATTGCAGCGGATCGTAACCCGGATTTTCACCAATCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGAC  >  NC_000913/1568238‑1568508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑