Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,506,416	C→T	intergenic (+11/‑32)	yjhC → / → ythA	KpLE2 phage‑like element; putative oxidoreductase YjhC/KpLE2 phage‑like element; uncharacterized protein YthA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,506,416	0	C	T	100.0%	251.2 / NA	70	intergenic (+11/‑32)	yjhC/ythA	KpLE2 phage‑like element; putative oxidoreductase YjhC/KpLE2 phage‑like element; uncharacterized protein YthA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (40/30);  total (40/30)

TGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGCCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTTTCTTCCTCTGTG  >  NC_000913/4506282‑4506547                                                                                                                                       |                                                                                                                                    tGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCtt                                                                                                                                >  2:711809/1‑140 (MQ=255)   aCCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGa                                                                                                                              >  1:776974/1‑140 (MQ=255)   aCCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGa                                                                                                                              >  1:383676/1‑140 (MQ=255)     cTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGAtt                                                                                                                            >  2:779360/1‑140 (MQ=255)             tGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCag                                                                                                                    <  1:266171/140‑1 (MQ=255)               gTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCagga                                                                                                                  <  1:588651/140‑1 (MQ=255)                tGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCaggag                                                                                                                 <  2:79142/140‑1 (MQ=255)                  aGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCagga                                                                                                                  >  1:911203/1‑137 (MQ=255)                  aGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCagga                                                                                                                  <  2:911203/137‑1 (MQ=255)                  aGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGc                                                                                                               >  2:198896/1‑140 (MQ=255)                     cggcCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCtt                                                                                                            <  1:438572/140‑1 (MQ=255)                     cggcCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCtt                                                                                                            >  2:772405/1‑140 (MQ=255)                     cggcCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCtt                                                                                                            <  2:957687/140‑1 (MQ=255)                     cggcCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCtt                                                                                                            <  1:565075/140‑1 (MQ=255)                     cggcCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCtt                                                                                                            <  1:883310/140‑1 (MQ=255)                     cggcCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCtt                                                                                                            <  1:78263/140‑1 (MQ=255)                       gcCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGc                                                                                                               >  1:914676/1‑135 (MQ=255)                       gcCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGc                                                                                                               <  2:914676/135‑1 (MQ=255)                             tCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTtatgtat                                                                                                    >  2:542830/1‑140 (MQ=255)                              cGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTtatgtatg                                                                                                   >  1:839677/1‑140 (MQ=255)                                                aTGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTc                                                                                 >  2:354278/1‑140 (MQ=255)                                                  gctgcCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGa                                                                               >  1:785693/1‑140 (MQ=255)                                                    tgcCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATa                                                                             <  1:533408/140‑1 (MQ=255)                                                         ctctTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAAtctc                                                                        <  1:711809/140‑1 (MQ=255)                                                            tttCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCAt                                                                      <  1:672394/139‑1 (MQ=255)                                                            tttCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCAt                                                                      >  2:672394/1‑139 (MQ=255)                                                                aaGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAAttt                                                                 >  1:497675/1‑140 (MQ=255)                                                                aaGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAAttt                                                                 <  1:117828/140‑1 (MQ=255)                                                                   aTCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAg                                                              <  2:931808/140‑1 (MQ=255)                                                                    tCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAg                                                              <  2:406254/139‑1 (MQ=255)                                                                    tCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAg                                                              >  1:406254/1‑139 (MQ=255)                                                                      gCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCAt                                                                      >  2:891975/1‑129 (MQ=255)                                                                      gCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCAt                                                                      <  1:891975/129‑1 (MQ=255)                                                                      gCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAg                                                           >  2:823179/1‑140 (MQ=255)                                                                       caggacaggaAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGt                                                          >  2:244865/1‑140 (MQ=255)                                                                       caggacaggaAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGt                                                          >  1:7792/1‑140 (MQ=255)                                                                            caggaAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCAt                                                     <  1:772405/140‑1 (MQ=255)                                                                             aggaAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCAtt                                                    >  2:276810/1‑140 (MQ=255)                                                                              ggaAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCAttt                                                   <  1:542830/140‑1 (MQ=255)                                                                               gaAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTa                                                  >  2:490819/1‑140 (MQ=255)                                                                                    tGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATa                                             >  2:696258/1‑140 (MQ=255)                                                                                    tGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATa                                             >  1:667505/1‑140 (MQ=255)                                                                                         aTCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAAc                                        >  1:883296/1‑140 (MQ=255)                                                                                          tCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACa                                       <  2:193515/140‑1 (MQ=255)                                                                                          tCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACa                                       <  2:883296/140‑1 (MQ=255)                                                                                            aGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATc                                     <  1:244865/140‑1 (MQ=255)                                                                                              tGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATccc                                   >  2:847717/1‑140 (MQ=255)                                                                                                    cATTAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTaaaa                             >  1:98662/1‑140 (MQ=255)                                                                                                       tAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAAc                            >  1:145684/1‑138 (MQ=255)                                                                                                       tAAACATACATCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAAc                            <  2:145684/138‑1 (MQ=255)                                                                                                              acatCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTTATAATTTTACCAGCGCCAGTTATGATAAAAACATCCGTTAACCCCaatccaac                   <  2:839677/140‑2 (MQ=255)                                                                                                               catCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCaatctaatc                  >  2:632563/1‑140 (MQ=255)                                                                                                               catCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCaatctaatc                  >  1:84086/1‑140 (MQ=255)                                                                                                               catCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCaatctaatc                  >  1:835006/1‑140 (MQ=255)                                                                                                                atCAGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCaatctaatct                 >  2:372568/1‑140 (MQ=255)                                                                                                                   aGTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCtttt              <  1:198896/140‑1 (MQ=255)                                                                                                                    gTAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCttttt             >  1:767188/1‑140 (MQ=255)                                                                                                                     tAATGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTttc            <  2:98662/140‑1 (MQ=255)                                                                                                                       aTGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTttctt          >  2:687766/1‑140 (MQ=255)                                                                                                                        tGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTttcttc         <  2:785693/140‑1 (MQ=255)                                                                                                                        tGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTttcttc         >  1:683577/1‑140 (MQ=255)                                                                                                                        tGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTttcttc         >  1:3010/1‑140 (MQ=255)                                                                                                                        tGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTttcttc         >  2:936681/1‑140 (MQ=255)                                                                                                                        tGTAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTttcttc         >  2:37321/1‑140 (MQ=255)                                                                                                                        tGTAAAAACTATACGTATCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTttcttc         >  1:210328/1‑140 (MQ=255)                                                                                                                          tAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTTTCTTCct       <  1:847717/140‑1 (MQ=255)                                                                                                                          tAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTTTCTTCct       >  1:56311/1‑140 (MQ=255)                                                                                                                          tAAAAACTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTTTCTTCct       >  2:417908/1‑140 (MQ=255)                                                                                                                              aaCTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTTTCTTCCTCtgt   <  1:310407/140‑1 (MQ=255)                                                                                                                               aCTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTTTCTTCCTCtgtg  <  1:810969/140‑1 (MQ=255)                                                                                                                               aCTATACGTCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTTTCTTCCTCtgtg  <  2:835006/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                    TGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAAAAACTATACGCCTCTTGATTTAATTCAGGAGGCCTTTTATGTATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTTTCTTCCTCTGTG  >  NC_000913/4506282‑4506547

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑