Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,200,928	A→G	C35C (TGT→TGC)	xisE ←	e14 prophage; putative excisionase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,200,928	0	A	G	100.0%	319.2 / NA	88	C35C (TGT→TGC)	xisE	e14 prophage; putative excisionase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (42/46);  total (42/46)

GTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGACAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTAACTGCT  >  NC_000913/1200794‑1201063                                                                                                                                       |                                                                                                                                        gTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCaaaa                                                                                                                                    >  2:755335/1‑140 (MQ=255) gTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCaaaa                                                                                                                                    >  2:353299/1‑140 (MQ=255)  tCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAaaat                                                                                                                                   >  2:170264/1‑140 (MQ=255)  tCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAaaat                                                                                                                                   >  1:561282/1‑140 (MQ=255)  tCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAaaat                                                                                                                                   <  2:927172/140‑1 (MQ=255)  tCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAaaat                                                                                                                                   <  2:561282/140‑1 (MQ=255)      gCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTCTCATGGCCGGTGGGCAaaataaat                                                                                                                               >  1:243879/1‑140 (MQ=255)       cTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAAtt                                                                                                                              <  1:109646/140‑1 (MQ=255)          ccATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTg                                                                                                                           <  1:254248/140‑1 (MQ=255)          ccATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTg                                                                                                                           <  2:863256/140‑1 (MQ=255)           cATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGc                                                                                                                          >  2:652140/1‑140 (MQ=255)           cATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGc                                                                                                                          <  1:652140/140‑1 (MQ=255)            aTTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCt                                                                                                                         <  1:200021/140‑1 (MQ=255)            aTTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCt                                                                                                                         >  2:200021/1‑140 (MQ=255)            aTTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCt                                                                                                                         <  2:681824/140‑1 (MQ=255)            aTTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCt                                                                                                                         >  1:681824/1‑140 (MQ=255)                         cGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAacgacg                                                                                                            <  1:170264/140‑1 (MQ=255)                         cGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAacgac                                                                                                             <  2:429642/139‑1 (MQ=255)                         cGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAacgac                                                                                                             >  1:429642/1‑139 (MQ=255)                          gTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGc                                                                                                           <  1:43424/140‑1 (MQ=255)                           ttGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAacgacg                                                                                                            <  2:121284/138‑1 (MQ=255)                           ttGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAacgacg                                                                                                            >  1:121284/1‑138 (MQ=255)                                   gTAATGAGTAATTTTTCTTGATTACAGGTGTTACCAACTCCCAACCTAACTCGGCGTCTTCCCGCAATCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGac                                                                                                  <  2:542882/140‑1 (MQ=255)                                    tAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGaca                                                                                                 <  1:668478/140‑1 (MQ=255)                                      aTGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGacaca                                                                                               >  2:385751/1‑140 (MQ=255)                                           tCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTgg                                                                                          >  1:231077/1‑140 (MQ=255)                                             aTTTTTCTTGATTACAGGTGTTACCACCTCCCCAACTAACGCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACTACGCAATGTGGACACACTTggag                                                                                        <  2:839711/140‑1 (MQ=255)                                             aTTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCaa                                                                                                         >  2:510017/1‑123 (MQ=255)                                             aTTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCaa                                                                                                         <  1:510017/123‑1 (MQ=255)                                                tttCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGAt                                                                                     <  2:83364/140‑1 (MQ=255)                                                       aTTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCt                                                                              >  1:246325/1‑140 (MQ=255)                                                       aTTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCt                                                                              >  1:329637/1‑140 (MQ=255)                                                                 ttACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTca                                                                    <  1:684326/140‑1 (MQ=255)                                                                 ttACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTca                                                                    >  2:48314/1‑140 (MQ=255)                                                                 ttACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTca                                                                    >  1:826033/1‑140 (MQ=255)                                                                 ttACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTca                                                                    <  1:48314/140‑1 (MQ=255)                                                                   aCCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTcagc                                                                  >  1:211718/1‑140 (MQ=255)                                                                       aCTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGcc                                                              <  2:211718/140‑1 (MQ=255)                                                                        cTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTca                                                                    <  1:575536/133‑1 (MQ=255)                                                                        cTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTca                                                                    >  2:575536/1‑133 (MQ=255)                                                                        cTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGccc                                                             >  1:85936/1‑140 (MQ=255)                                                                        cTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGccc                                                             >  1:1711/1‑140 (MQ=255)                                                                        cTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGccc                                                             >  1:424875/1‑140 (MQ=255)                                                                         tCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCa                                                            >  2:556854/1‑140 (MQ=255)                                                                         tCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCa                                                            >  1:435790/1‑140 (MQ=255)                                                                         tCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCa                                                            <  2:954251/140‑1 (MQ=255)                                                                         tCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCa                                                            >  1:509382/1‑140 (MQ=255)                                                                         tCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCa                                                            <  2:826033/140‑1 (MQ=255)                                                                         tCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCa                                                            >  2:618203/1‑140 (MQ=255)                                                                         tCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTCTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCa                                                            <  2:243879/140‑1 (MQ=255)                                                                           cccAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCAtt                                                          >  2:27972/1‑140 (MQ=255)                                                                                ctaactCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCa                                                     <  2:85936/140‑1 (MQ=255)                                                                                ctaactCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCa                                                     <  2:1711/140‑1 (MQ=255)                                                                                   actCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAaga                                                  >  1:390764/1‑140 (MQ=255)                                                                                   actCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAaga                                                  >  1:956266/1‑140 (MQ=255)                                                                                      cGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGtt                                               <  2:231077/140‑1 (MQ=255)                                                                                      cGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGtt                                               <  2:390764/140‑1 (MQ=255)                                                                                         cGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGcc                                                              <  1:701275/122‑1 (MQ=255)                                                                                         cGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGcc                                                              >  2:701275/1‑122 (MQ=255)                                                                                         cGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAAc                                            >  1:289941/1‑140 (MQ=255)                                                                                          gTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCaa                                                    <  1:189429/131‑1 (MQ=255)                                                                                          gTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCaa                                                    >  2:189429/1‑131 (MQ=255)                                                                                          gTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACa                                           >  2:736150/1‑140 (MQ=255)                                                                                             cTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACAttg                                        >  2:365792/1‑139 (MQ=255)                                                                                                 cGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAg                                    <  2:956266/140‑1 (MQ=255)                                                                                                        gCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTg                                       >  2:367104/1‑130 (MQ=255)                                                                                                        gCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTg                                       <  1:367104/130‑1 (MQ=255)                                                                                                        gCCATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGc                             >  2:170713/1‑140 (MQ=255)                                                                                                         ccATAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCg                            <  2:246325/140‑1 (MQ=255)                                                                                                           aTAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGAt                          <  1:170713/140‑1 (MQ=255)                                                                                                           aTAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGAt                          <  2:289941/140‑1 (MQ=255)                                                                                                           aTAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGAt                          <  1:736150/140‑1 (MQ=255)                                                                                                            tAACCGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATc                         <  1:353299/140‑1 (MQ=255)                                                                                                                cGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCt                     <  1:556854/140‑1 (MQ=255)                                                                                                                cGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCt                     <  2:673235/140‑1 (MQ=255)                                                                                                                cGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCt                     <  2:509382/140‑1 (MQ=255)                                                                                                                cGGCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCt                     <  1:618203/140‑1 (MQ=255)                                                                                                                  gCCTTGTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCtta                   >  2:488759/1‑140 (MQ=255)                                                                                                                       gTTTCATGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATtact              >  1:930859/1‑140 (MQ=255)                                                                                                                             tGGCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTa        >  2:130141/1‑140 (MQ=255)                                                                                                                              ggCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTaa       <  1:488759/140‑1 (MQ=255)                                                                                                                               gCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTAAc      <  2:597996/140‑1 (MQ=255)                                                                                                                               gCCGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTAAc      <  1:130141/140‑1 (MQ=255)                                                                                                                                 cGGTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTAACTg    >  2:302841/1‑140 (MQ=255)                                                                                                                                  ggTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTAACTGc   >  2:458658/1‑140 (MQ=255)                                                                                                                                   gTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTa        >  1:861023/1‑134 (MQ=255)                                                                                                                                   gTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTa        <  2:861023/134‑1 (MQ=255)                                                                                                                                   gTGGGCAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTAACTGCt  <  2:424875/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                        GTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTCATGGCCGGTGGACAAAATAAATTCTGCTTAGCATAACGACGCAATGTGGACACACTTGGAGGATTACTTCTGTATTTTTCAGCAGCCCATTCTTCAAGAGTTAACATTTGAAGCATATGCGATCACCTTATTACTACACTAACTGCT  >  NC_000913/1200794‑1201063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑