Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,710,630	A→G	T143A (ACC→GCC)	rsxG →	SoxR [2Fe‑2S] reducing system protein RsxG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,710,630	0	A	G	100.0%	130.6 / NA	37	T143A (ACC→GCC)	rsxG	SoxR [2Fe‑2S] reducing system protein RsxG
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (18/19);  total (18/19)

GATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAACGCGCCG  >  NC_000913/1710495‑1710765                                                                                                                                        |                                                                                                                                        gATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCa                                                                                                                                     >  1:55409/1‑140 (MQ=255)              gTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTaaa                                                                                                                        >  2:321414/1‑140 (MQ=255)              gTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTaaa                                                                                                                        >  2:644312/1‑140 (MQ=255)               tGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTaaaa                                                                                                                       >  2:540803/1‑140 (MQ=255)               tGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTaaaa                                                                                                                       >  1:69307/1‑140 (MQ=255)                         ctgctgGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAgtgg                                                                                                             >  2:334718/1‑140 (MQ=255)                              ggtggGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAg                                                                                                        <  1:495250/140‑1 (MQ=255)                                      ccGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAg                                                                                                                <  2:924946/124‑1 (MQ=255)                                      ccGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAg                                                                                                                >  1:924946/1‑124 (MQ=255)                                      ccGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATgcg                                                                                                <  2:110868/140‑1 (MQ=255)                                        gATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCa                                                                                              <  1:540803/140‑1 (MQ=255)                                        gATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCa                                                                                              <  1:644312/140‑1 (MQ=255)                                              aaCGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACt                                                                                            <  1:243468/136‑1 (MQ=255)                                              aaCGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACt                                                                                            >  2:243468/1‑136 (MQ=255)                                               aCGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCg                                                                                       <  2:422837/140‑1 (MQ=255)                                               aCGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCg                                                                                       <  1:321414/140‑1 (MQ=255)                                                      ggTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTgaaga                                                                                <  1:334718/140‑1 (MQ=255)                                                       gTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTgaagaa                                                                               <  1:698734/140‑1 (MQ=255)                                                        tACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGaagaaa                                                                              <  2:69307/140‑1 (MQ=255)                                                                  gcgcgTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGgtggtg                                                                    >  1:618440/1‑140 (MQ=255)                                                                  gcgcgTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGgtggtg                                                                    >  1:344605/1‑140 (MQ=255)                                                                    gcgTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGAt                                                                  >  1:882455/1‑140 (MQ=255)                                                                    gcgTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGAt                                                                  >  1:820581/1‑140 (MQ=255)                                                                        gACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCg                                                              <  2:516484/140‑1 (MQ=255)                                                                                  cacGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCAc                                                    >  2:818531/1‑140 (MQ=255)                                                                                       aaCGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGa                                                             >  1:867365/1‑126 (MQ=255)                                                                                       aaCGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGa                                                             <  2:867365/126‑1 (MQ=255)                                                                                            cAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGAc                                                            <  2:410454/122‑1 (MQ=255)                                                                                            cAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGAc                                                            >  1:410454/1‑122 (MQ=255)                                                                                                gCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTa                                      >  1:18178/1‑140 (MQ=255)                                                                                                           aaaTCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCcgcgcg                           <  2:260003/140‑1 (MQ=255)                                                                                                           aaaTCGAACTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCcgcgcg                           <  2:55409/140‑1 (MQ=255)                                                                                                                   cTGCGCCTTTCTGACTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTaa                   >  2:24782/1‑140 (MQ=255)                                                                                                                                 cTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAAcgcg     <  2:402262/140‑1 (MQ=255)                                                                                                                                 cTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAAcgcg     <  1:818531/140‑1 (MQ=255)                                                                                                                                 cTGGATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAAcgcg     <  1:621219/140‑1 (MQ=255)                                                                                                                                    gATCGCCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAACGCGCCg  >  1:22335/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                        GATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAACGCGCCG  >  NC_000913/1710495‑1710765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑