| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,061,601 | T→C | L111L (TTA→TTG) | nac ← | DNA‑binding transcriptional dual regulator Nac |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,061,601 | 0 | T | C | 97.7% | 148.1 / ‑4.2 | 44 | L111L (TTA→TTG) | nac | DNA‑binding transcriptional dual regulator Nac |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (24/19); total (24/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.80e-01 | |||||||||||
ATACACCAGCCACAGGGGAA‑TGCTCATAAATCACCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGTAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCGCGCAT > NC_000913/2061465‑2061734 | aTACACCAGCCACAGGGGAA‑TGCTCATAAATCACCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGcaat > 1:770178/1‑140 (MQ=255) acCAGCCACAGGGGAA‑TGCTCATAAATCACCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAgg > 1:944525/1‑140 (MQ=255) cccgaaGGGGAATTACTAATAACTCCCCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCCCCACTATTTTCATGAAGATAGATAACGATCTCCGAAAATTCAGCGCAAACCGCCTGCAATAAGGGCa < 2:785303/135‑1 (MQ=255) ccACAGGGGAA‑TGCTCATAAATCACCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATg > 2:344404/1‑140 (MQ=255) ccACAGGGGAA‑TGCTCATAAATCACCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATg > 2:816740/1‑140 (MQ=255) ccACAGGGGAA‑TGCTCATAAATCACCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATg > 1:785303/1‑140 (MQ=255) aTAAATCACCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAg > 2:226010/1‑140 (MQ=255) aCCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGa > 2:639630/1‑128 (MQ=255) aCCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGa < 1:639630/128‑1 (MQ=255) aCCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTcc > 1:404821/1‑140 (MQ=255) ccGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCt > 2:852115/1‑140 (MQ=255) ccGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCt < 2:404821/140‑1 (MQ=255) gCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTgg > 1:620189/1‑140 (MQ=255) cGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAg < 2:481494/140‑1 (MQ=255) aGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGcc > 1:236373/1‑140 (MQ=255) ttGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCaa > 1:55496/1‑140 (MQ=255) ttGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCaa > 1:487778/1‑140 (MQ=255) gATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTAGTGCAAAGCCAATCgag > 1:47768/1‑140 (MQ=255) gATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTAGTGCAAAGCCAATCgag > 1:2867/1‑140 (MQ=255) aTTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCgaga < 2:55496/140‑1 (MQ=255) tATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAGCCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACtt > 2:593618/1‑140 (MQ=255) cAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGcc < 2:770178/140‑1 (MQ=255) cAATTTTCCGTTAAGCCCTGCCCCACTATTTTCATGAAGATAGAAAACGATCTCCGGAAATTCAGCGCAAACCGCCTGTAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGcc < 2:26018/140‑1 (MQ=255) tttCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGAt < 1:521457/140‑1 (MQ=255) ttCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGTGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATa > 2:918549/1‑140 (MQ=255) cACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGAc < 2:236373/140‑1 (MQ=255) caccacTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACg > 2:781431/1‑140 (MQ=255) cacTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTa > 2:227766/1‑140 (MQ=255) cTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATg > 2:454428/1‑140 (MQ=255) ttCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCg < 1:781431/140‑1 (MQ=255) ttCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCg < 2:5085/140‑1 (MQ=255) gAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGt > 2:81594/1‑140 (MQ=255) gAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGt < 2:620189/140‑1 (MQ=255) gAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTAGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGt < 2:47768/140‑1 (MQ=255) gAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTAGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGt < 2:2867/140‑1 (MQ=255) gatagataACGATCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTgg > 2:267958/1‑140 (MQ=255) atagataACGATCTCCGGAAATTCAGTGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTggg < 1:918549/140‑1 (MQ=255) tagctcaCGACCTCCGGAAATTCAGGGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGCCGCAGCTGTCCCTGGTGCAAACCCAATCGAGGCTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGc < 2:839039/134‑1 (MQ=255) aTCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTcaca < 1:81594/140‑1 (MQ=255) aTCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTcaca < 1:454428/140‑1 (MQ=255) aTCTCCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTcaca < 1:267958/140‑1 (MQ=255) gctagggAAAATAAGCCCGACCCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACAAACGTTATGCTCCGCCAGTTGGGCCTGTTCacac < 2:487778/135‑1 (MQ=255) ctcCGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACt > 2:324890/1‑140 (MQ=255) cGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGAc < 1:324890/140‑1 (MQ=255) cGGAAATTCAGCGCGAACCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGAc > 2:364416/1‑140 (MQ=255) aCCGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCgcgc > 1:20398/1‑140 (MQ=255) cGCCTGCAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCGCGCAt < 1:227766/140‑1 (MQ=255) | ATACACCAGCCACAGGGGAA‑TGCTCATAAATCACCGCCATATCGAGTTGGTGATTTATCAATTTTTCGTTAAGCACTGCACCACTATTTTCATGAAGATAGATAACGATCTCCGGAAATTCAGCGCGAACCGCCTGTAATAAGGGCATGGTGATGGATGACGCAGCGGTTCCTGGTGCAAAGCCAATCGAGACTTGCCCCGATAATGCCTGACCAACGTTATGCACCGCCAGTTGGGCCTGTTCACACTGACGTAAAATGGCCCGCGCAT > NC_000913/2061465‑2061734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |