Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	268,831	Δ1 bp	coding (130/864 nt)	ykfA ←	CP4‑6 prophage; putative GTP‑binding protein YkfA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	268,828	0	T	.	100.0%	368.7 / NA	88	coding (133/864 nt)	ykfA	CP4‑6 prophage; putative GTP‑binding protein YkfA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (46/42);  total (46/42)

GATCCATCAGCGTTATATAGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGGTTTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATTCATCAC  >  NC_000913/268690‑268963                                                                                                                                           |                                                                                                                                        gATCCATCAGCGTTATATAGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTACACAGACTGCTCTTCCCAACACCGGtt                                                                                                                                        <  1:1381711/140‑1 (MQ=255)     cATCAGCGTTATATAGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGGttta                                                                                                                                      <  2:208779/138‑2 (MQ=255)     cATCAGCGTTATATAGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGGttta                                                                                                                                      >  1:208779/1‑137 (MQ=255)       tCAGCGTTATATAGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCa                                                                                                                                 <  1:1353114/140‑1 (MQ=255)             ttATATAGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGc                                                                                                                           >  2:54034/1‑140 (MQ=255)             ttATATAGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATAAATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATa                                                                                                                               <  1:1122029/136‑1 (MQ=255)             ttATATAGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATAAATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATa                                                                                                                               >  2:1122029/1‑136 (MQ=255)              tatataGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGGtttaccc                                                                                                                                   <  1:1517416/132‑5 (MQ=255)              tatataGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGGtttaccc                                                                                                                                   >  2:1517416/1‑128 (MQ=255)                tataGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGa                                                                                                                        >  1:790105/1‑140 (MQ=255)                     cGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACt                                                                                                                   >  2:785443/1‑140 (MQ=255)                     cGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACt                                                                                                                   >  1:1290962/1‑140 (MQ=255)                     cGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACt                                                                                                                   >  1:1042111/1‑140 (MQ=255)                     cGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACt                                                                                                                   >  1:1262586/1‑140 (MQ=255)                       gTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACt                                                                                                                   >  2:992172/1‑138 (MQ=255)                       gTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACt                                                                                                                   <  1:992172/138‑1 (MQ=255)                       gTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTgg                                                                                                                 >  2:530997/1‑140 (MQ=255)                       gTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTgg                                                                                                                 >  1:1110298/1‑140 (MQ=255)                       gTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTgg                                                                                                                 >  1:1056217/1‑140 (MQ=255)                       gTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTgg                                                                                                                 >  2:1199966/1‑140 (MQ=255)                        tCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACt                                                                                                                   >  1:59527/1‑137 (MQ=255)                        tCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACt                                                                                                                   <  2:59527/137‑1 (MQ=255)                        tCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGc                                                                                                                >  1:882823/1‑140 (MQ=255)                         cGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCt                                                                                                               <  1:1271871/140‑1 (MQ=255)                         cGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCt                                                                                                               <  1:785443/140‑1 (MQ=255)                          gCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTc                                                                                                              >  1:1207859/1‑140 (MQ=255)                          gCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTc                                                                                                              >  2:513144/1‑140 (MQ=255)                          gCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTCCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTc                                                                                                              >  1:1241729/1‑140 (MQ=255)                            cGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGt                                                                                                            <  2:1207859/140‑1 (MQ=255)                            cGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGt                                                                                                            <  2:1327878/140‑1 (MQ=255)                            cGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGt                                                                                                            <  2:1033576/140‑1 (MQ=255)                              aCTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGtag                                                                                                          <  2:719815/140‑1 (MQ=255)                               cTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGtagt                                                                                                         <  1:530997/140‑1 (MQ=255)                                    aGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTagttagtt                                                                                                    <  2:882823/140‑1 (MQ=255)                                    aGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTagttagtt                                                                                                    <  1:513144/140‑1 (MQ=255)                                      gCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTaa                                                                                                  <  2:1150382/140‑1 (MQ=255)                                      gCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTaa                                                                                                  <  2:1245297/140‑1 (MQ=255)                                      gCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTaa                                                                                                  <  2:1262586/140‑1 (MQ=255)                                           aGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGt                                                                                             >  1:1086003/1‑140 (MQ=255)                                                      tCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTtgctgc                                                                                  <  1:54034/140‑1 (MQ=255)                                                            gtACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGc                                                                            <  2:1086003/140‑1 (MQ=255)                                                            gtACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGc                                                                            <  2:344006/140‑1 (MQ=255)                                                              aCAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCg                                                                          <  2:1290962/140‑1 (MQ=255)                                                              aCAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCg                                                                          <  2:1233990/140‑1 (MQ=255)                                                                aGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGct                                                                        <  1:1199966/140‑1 (MQ=255)                                                                  gccgccACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGctct                                                                      >  2:1290252/1‑140 (MQ=255)                                                                    cgccACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGa                                                                    <  1:1360219/140‑1 (MQ=255)                                                                    cgccACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGa                                                                    >  2:583236/1‑140 (MQ=255)                                                                      ccACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATa                                                                  >  1:1158227/1‑140 (MQ=255)                                                                       cacaTCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATAc                                                                 >  2:684583/1‑140 (MQ=255)                                                                       cacaTCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATAc                                                                 >  1:581975/1‑140 (MQ=255)                                                                            cGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCAtt                                                            >  2:1149236/1‑140 (MQ=255)                                                                            cGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCAtt                                                            >  1:1161162/1‑140 (MQ=255)                                                                            cGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCAtt                                                            >  2:1017326/1‑140 (MQ=255)                                                                               tGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCg                                                         <  2:581975/140‑1 (MQ=255)                                                                                gACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCgg                                                        >  2:1501065/1‑140 (MQ=255)                                                                                gACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCgg                                                        >  1:658514/1‑140 (MQ=255)                                                                                   cGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAg                                                     >  2:264803/1‑140 (MQ=255)                                                                                     gTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCAATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGAt                                                   <  1:983223/140‑1 (MQ=255)                                                                                      tGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATc                                                  >  2:713137/1‑140 (MQ=255)                                                                                             tctcCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGc                                           >  1:180586/1‑140 (MQ=255)                                                                                                ccGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGAt                                        >  1:374235/1‑140 (MQ=255)                                                                                                ccGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGAt                                        >  1:976082/1‑140 (MQ=255)                                                                                                 cGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGAtt                                       >  2:28821/1‑140 (MQ=255)                                                                                                  ggCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAg                                                     >  1:490599/1‑125 (MQ=255)                                                                                                  ggCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAg                                                     <  2:490599/125‑1 (MQ=255)                                                                                                  ggCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTg                                      >  2:838207/1‑140 (MQ=255)                                                                                                  ggCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTg                                      >  1:879988/1‑140 (MQ=255)                                                                                                   gCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGc                                     >  1:1043707/1‑140 (MQ=255)                                                                                                         aGGGCATTGCACAGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAAc                               <  1:713137/140‑1 (MQ=255)                                                                                                                  cacaGACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCaaa                      >  2:202456/1‑140 (MQ=255)                                                                                                                      gACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCtt                  <  2:976082/140‑1 (MQ=255)                                                                                                                      gACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCtt                  <  1:684583/140‑1 (MQ=255)                                                                                                                      gACTGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCtt                  <  2:658514/140‑1 (MQ=255)                                                                                                                         tGCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAg               >  2:339486/1‑140 (MQ=255)                                                                                                                          gCTCTTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGa              >  2:1377555/1‑140 (MQ=255)                                                                                                                           ctctTCCCAACACCGG‑TTTCCCCATAGTCCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGaa             <  2:288713/140‑1 (MQ=39)                                                                                                                            tctTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAat            <  1:838207/140‑1 (MQ=255)                                                                                                                            tctTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAat            >  1:703132/1‑140 (MQ=255)                                                                                                                            tctTCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAat            >  2:1210361/1‑140 (MQ=255)                                                                                                                              ttCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAatta          <  2:879988/140‑1 (MQ=255)                                                                                                                              ttCCCAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAatta          <  1:1113504/140‑1 (MQ=255)                                                                                                                                cccAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAattatt        <  1:583236/140‑1 (MQ=255)                                                                                                                                cccAACACCGG‑TTTACCCATAATGCCGATCACTGGATCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAattatt        <  2:1056217/140‑1 (MQ=255)                                                                                                                                 ccAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATtc       >  1:1176401/1‑140 (MQ=255)                                                                                                                                 ccAACACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATtc       <  1:1290252/140‑1 (MQ=255)                                                                                                                                   aaCACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATtcat     <  2:420604/140‑1 (MQ=255)                                                                                                                                   aaCACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATtcat     <  2:204067/140‑1 (MQ=255)                                                                                                                                   aaCACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATtcat     >  1:1311184/1‑140 (MQ=255)                                                                                                                                   aaCACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATtcat     <  2:1042111/140‑1 (MQ=255)                                                                                                                                   aaCACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATtcat     <  2:98162/140‑1 (MQ=255)                                                                                                                                   aaCACCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATtcat     <  1:28821/140‑1 (MQ=255)                                                                                                                                     cacCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATtcatca   >  2:404926/1‑140 (MQ=255)                                                                                                                                      acCGG‑TTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATTCATCac  <  1:1210361/140‑1 (MQ=255)                                                                                                                                           |                                                                                                                                        GATCCATCAGCGTTATATAGCGGTCGCCGACTTGCAGGCGAAAGCGCAGTGGCTCACGTGTACAGGCCGCCACATCGCTGACCGGTGATATATCTCCGGCAAACAGGGCATTGCACAGACTGCTCTTCCCAACACCGGTTTTACCCATAATGCCGATCACTGGCTCGTAGTTAGTTAACTGGTTAATTTGCTGCAGAAGCCGCTCTGATACCCATTGCGGCAGATCAGCAAGCGATTGCTGAAACGACTTCAAACCTTCAGAATTATTCATCAC  >  NC_000913/268690‑268963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑