| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,236,278 | (G)6→7 | coding (964/1533 nt) | ycgB ← | PF04293 family protein YcgB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,236,272 | 1 | . | G | 97.9% | 326.5 / ‑0.8 | 95 | coding (970/1533 nt) | ycgB | PF04293 family protein YcgB |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base G (44/49); total (45/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.83e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
CCAGCCAGTCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTCGTTCATCAC > NC_000913/1236134‑1236404 | ccagccagTCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑g > 1:190321/1‑140 (MQ=255)ccagccagTCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑g > 2:280215/1‑140 (MQ=255)ccagccagTCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑g > 2:1534854/1‑140 (MQ=255) agccagTCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑ggg < 2:1107830/140‑1 (MQ=255) gTCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑ggg‑ggggc > 1:696372/1‑138 (MQ=255) gTCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑ggg‑ggggc > 2:47868/1‑138 (MQ=255) tCGGAACTGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑ggg‑ggggct > 2:1348802/1‑137 (MQ=255) tCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑ggg‑ggggct > 2:733205/1‑137 (MQ=255) tCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑ggg‑gg > 1:1167226/1‑136 (MQ=255) tCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑ggg‑gg < 2:1167226/136‑1 (MQ=255) tCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑gg < 1:48513/133‑1 (MQ=255) tCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑gg > 2:48513/1‑133 (MQ=255) aaCCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGaa < 1:280215/140‑1 (MQ=255) aaCCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGaa < 1:1534854/140‑1 (MQ=255) ccGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGa < 2:78496/140‑1 (MQ=255) ccGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGa < 1:798998/140‑1 (MQ=255) gCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACca > 2:802884/1‑140 (MQ=255) cGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACcac < 1:733205/140‑1 (MQ=255) cGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACcac > 2:1144377/1‑140 (MQ=255) atatCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACAt < 1:1144377/140‑1 (MQ=255) ggAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGtgtg > 1:1480692/1‑140 (MQ=255) gAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAGGGGG‑GGGCTGGAAGACCACATTGGtgtg > 2:562600/1‑140 (MQ=255) gAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTgg < 2:1168864/140‑1 (MQ=255) aaCCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGc < 1:1185742/140‑1 (MQ=255) ccAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCtg > 1:1447200/1‑140 (MQ=255) tATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCa > 2:374431/1‑140 (MQ=255) gTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAAc > 1:296031/1‑140 (MQ=255) gTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAAc > 1:3072/1‑140 (MQ=255) tcttctTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACt > 2:635400/1‑140 (MQ=255) ttcttcCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTcc > 2:1168084/1‑140 (MQ=255) cttcCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTc < 2:955139/137‑1 (MQ=255) cttcCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAg > 2:1082298/1‑140 (MQ=255) cttcCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAg > 1:1065847/1‑140 (MQ=255) ccGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAt > 2:196159/1‑140 (MQ=255) ttGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑aaa > 2:1223292/1‑140 (MQ=255) tGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑aaaa < 2:109316/140‑1 (MQ=255) ggCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAAc > 2:524754/1‑140 (MQ=255) gCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACg > 2:15477/1‑140 (MQ=255) cTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTcc > 1:981682/1‑140 (MQ=255) aCAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGtt < 1:136388/140‑1 (MQ=255) cAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTa < 2:981682/140‑1 (MQ=255) aaTCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACt < 1:374431/140‑1 (MQ=255) aaTCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACt < 2:1065847/140‑1 (MQ=255) cGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTcc < 1:635400/140‑1 (MQ=255) cGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTcc < 1:268268/140‑1 (MQ=255) gTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCATAAAAACGTTCCGTTACTTTcc > 1:1282896/1‑140 (MQ=255) ttAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCtt > 2:1019553/1‑140 (MQ=255) ttAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCtt > 1:364602/1‑140 (MQ=255) tAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTtc < 1:1483205/140‑1 (MQ=255) atatCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTtcat < 1:15477/140‑1 (MQ=255) tatCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTtcatc < 2:3072/140‑1 (MQ=255) cTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATAc < 1:47868/140‑1 (MQ=255) tGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACa < 1:1424582/140‑1 (MQ=255) ggAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCATAAAAACGTTCCGTTACTTTCCCTTCATCATACa < 2:1282896/140‑1 (MQ=255) gAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGa < 1:1168084/140‑1 (MQ=255) gAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGa < 1:196159/140‑1 (MQ=255) gAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGa < 1:1348802/140‑1 (MQ=255) gAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGa < 1:468592/140‑1 (MQ=255) aaCATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAGGGGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGa < 1:562600/140‑1 (MQ=255) aaCATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTcc < 1:822187/125‑1 (MQ=255) aaCATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTcc > 2:822187/1‑125 (MQ=255) aCATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATg < 2:696372/140‑1 (MQ=255) cATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTcc > 1:1077113/1‑123 (MQ=255) cATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTcc < 2:1077113/123‑1 (MQ=255) cATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTtcat > 2:62000/1‑129 (MQ=255) cATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTtcat < 1:62000/129‑1 (MQ=255) cATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGCTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATgg > 1:784771/1‑140 (MQ=255) tGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGtt > 1:945485/1‑140 (MQ=255) tGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGtt < 2:296031/140‑1 (MQ=255) ggCGAACCCGAGGGCATACGGTTTGATTCCGCTGTAGCACGGGCGGTTATA‑‑GGGTGGGCTGGATGACCACGTTTGTGTGGCTGTGCAACTACTCCAACAT‑AATACTTTCTGTTACTTTCCCTTCATCATACAGATGGTTa > 2:133963/1‑140 (MQ=255) ggCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGTTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTa > 1:1217661/1‑140 (MQ=255) ggCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGa > 1:373721/1‑134 (MQ=255) ggCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGa < 2:373721/134‑1 (MQ=255) ggCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTa > 1:978708/1‑140 (MQ=255) ggCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGGTa > 2:129187/1‑140 (MQ=255) ggCGAACCCGAGGGCATACGGGTTGATGCCGCTGCACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTa > 2:1446416/1‑140 (MQ=255) gCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTaa > 1:310372/1‑140 (MQ=255) gCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTaa < 2:1447200/140‑1 (MQ=255) cGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAg < 2:190321/140‑1 (MQ=255) aaCCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGa < 2:1480692/140‑1 (MQ=255) aCCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGAt < 1:802884/140‑1 (MQ=255) gAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGgtg < 1:15062/140‑1 (MQ=255) aGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGgtgt > 2:1258398/1‑140 (MQ=255) aTACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGtt > 2:1399932/1‑124 (MQ=255) aTACGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGtt < 1:1399932/124‑1 (MQ=255) aCGGGTTGATGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCa > 1:1464052/1‑140 (MQ=255) aTGCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCg > 1:300159/1‑140 (MQ=255) gCCGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGcc < 2:1464052/140‑1 (MQ=255) ccGCTGTACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGccc < 2:364602/140‑1 (MQ=255) tGTACCACGGGCTGTTATA‑‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCt > 1:996709/1‑140 (MQ=255) tACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGTTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCtt < 2:1217661/140‑1 (MQ=255) tACCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCtt < 1:1082298/140‑1 (MQ=255) aCCACGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTc > 2:626991/1‑140 (MQ=255) cGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTCg < 2:727691/137‑1 (MQ=255) cGGGCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTCg > 1:727691/1‑137 (MQ=255) ggCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTCGTtcat > 1:332015/1‑140 (MQ=255) gCTGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTCGTtcatc > 1:1430018/1‑140 (MQ=255) tGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTCGTTCATCAc > 1:144616/1‑140 (MQ=255) tGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTCGTTCATCAc < 1:1223292/140‑1 (MQ=255) tGTTATAG‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTCGTTCATCAc > 1:823843/1‑140 (MQ=255) | CCAGCCAGTCGGAACCGGCGATATCCGGGAACCAGTATTTGTCTTCTTCCGTTGGCGACTGACAAATCCGTTTAATATCCTGGAACATGGCGAACCCGAGGGCATACGGGTTGATGCCGCTGTACCACGGGCTGTTATA‑‑GGG‑GGGCTGGAAGACCACATTGGTGTGGCTGTGCAAAAACTCCAGCAT‑AAAACGTTCCGTTACTTTCCCTTCATCATACAGATGGTTAAGGATGGTGTAGTGCCAGAAGGTCGCCCAGCCTTCGTTCATCAC > NC_000913/1236134‑1236404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |