Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,377,917	T→C	E97E (GAA→GAG)	rpsI ←	30S ribosomal subunit protein S9

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,377,917	0	T	C	100.0%	234.2 / NA	67	E97E (GAA→GAG)	rpsI	30S ribosomal subunit protein S9
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (31/36);  total (31/36)

AAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGTTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATGTCGACCA  >  NC_000913/3377786‑3378047                                                                                                                                    |                                                                                                                                        aaaTTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGTAGCCAGCTTTACGCAGCTCAGAACg                                                                                                                                 >  2:114522/1‑140 (MQ=255)   aTTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCa                                                                                                                               <  2:686711/140‑1 (MQ=255)           cTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACtcg                                                                                                                       <  1:382160/140‑1 (MQ=255)            tGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACtcgt                                                                                                                      <  1:1517714/140‑1 (MQ=255)              ccGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACtcgtcg                                                                                                                    <  1:723676/140‑1 (MQ=255)                ggAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTa                                                                                                                  <  1:951640/140‑1 (MQ=255)                       aaGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATc                                                                                                           >  2:1311079/1‑140 (MQ=255)                       aaGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATc                                                                                                           >  1:412554/1‑140 (MQ=255)                          ccAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCaga                                                                                                        <  2:1304231/140‑1 (MQ=255)                          ccAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCaga                                                                                                        <  1:1019019/140‑1 (MQ=255)                            aaTTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAgc                                                                                                      <  2:806894/140‑1 (MQ=255)                            aaTTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGAACTCGTCGTATTCCATCAGAgc                                                                                                      <  1:286452/140‑1 (MQ=255)                             aTTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAgcg                                                                                                     <  2:37035/140‑1 (MQ=255)                                    tttGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGa                                                                                              <  2:470399/140‑1 (MQ=255)                                    tttGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGa                                                                                              <  2:253516/140‑1 (MQ=255)                                    tttGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGa                                                                                              >  2:827436/1‑140 (MQ=255)                                       ggAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATAc                                                                                           <  1:1471384/140‑1 (MQ=255)                                         agaACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCg                                                                                         <  2:77/140‑1 (MQ=255)                                             cTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAc                                                                                     >  2:512386/1‑140 (MQ=255)                                             cTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAc                                                                                     >  2:1528561/1‑140 (MQ=255)                                                cGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGa                                                                             >  2:1042310/1‑140 (MQ=255)                                                cGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGa                                                                             >  2:624245/1‑140 (MQ=255)                                                     gacgacgTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCg                                                                                         <  2:309640/128‑1 (MQ=255)                                                     gacgacgTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCg                                                                                         >  1:309640/1‑128 (MQ=255)                                                            tGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCt                                                                 <  2:412554/140‑1 (MQ=255)                                                             gCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTg                                                                >  2:215563/1‑140 (MQ=255)                                                             gCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATCCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTg                                                                <  1:1528561/140‑1 (MQ=255)                                                              cTTTTCGCGGACCGACTTTCTTGCGTTCAACCTGACGAGCGTCACTAGTAACGAAGGCAGCTTTGCGCAGCTCAGAACGCAGGGTCTGGTCGTATTCCATCAGAGCGGGGGTGATACTGTCAC‑‑‑‑‑GGATCGCTCCAGCCTGa                                                               <  2:951980/140‑1 (MQ=255)                                                                ttACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGAcc                                                             <  1:512386/140‑1 (MQ=255)                                                                    gCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCagag                                                         >  2:462080/1‑140 (MQ=255)                                                                     cAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGTAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAgaga                                                        <  1:114522/140‑1 (MQ=255)                                                                     cAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCa                                                                        <  2:535089/124‑1 (MQ=255)                                                                     cAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCa                                                                        >  1:535089/1‑124 (MQ=255)                                                                        aCCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGGACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATac                                                     >  2:812619/1‑140 (MQ=255)                                                                        aCCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATac                                                     >  2:1156608/1‑140 (MQ=255)                                                                          cGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATacca                                                   <  2:1191654/140‑1 (MQ=255)                                                                           gACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATaccac                                                  <  1:480213/140‑1 (MQ=255)                                                                            aCTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATaccacc                                                 <  1:624245/140‑1 (MQ=255)                                                                             cTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATaccacca                                                >  2:1388640/1‑140 (MQ=255)                                                                             cTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATaccacca                                                >  1:1176913/1‑140 (MQ=255)                                                                               ttCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGAGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATaccaccacc                                              <  2:950407/140‑1 (MQ=255)                                                                                tCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCt                                             >  1:650988/1‑140 (MQ=255)                                                                                    aCGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTaa                                         <  1:1042310/140‑1 (MQ=255)                                                                                    aCGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTaa                                         >  1:95671/1‑140 (MQ=255)                                                                                         cAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGACGGACAGGATCGCACCAGCCTGACCAGAGATACCACCACCTTTaa                                         <  2:987000/140‑1 (MQ=255)                                                                                         cAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTg                                    <  1:215563/140‑1 (MQ=255)                                                                                          aaCCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGa                                   >  2:1452418/1‑140 (MQ=255)                                                                                               gACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTAc                              <  1:827436/140‑1 (MQ=255)                                                                                                aCGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTaa                                         >  1:499670/1‑128 (MQ=255)                                                                                                aCGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTaa                                         <  2:499670/128‑1 (MQ=255)                                                                                                    gCGTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTc                         >  1:1503968/1‑140 (MQ=255)                                                                                                     cGTCACGAGCAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAgg                           <  2:1407964/137‑1 (MQ=255)                                                                                                     cGTCACGAGCAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAgg                           >  1:1407964/1‑137 (MQ=255)                                                                                                      gTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCa                       >  1:820161/1‑140 (MQ=255)                                                                                                      gTCACGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCa                       <  2:95671/140‑1 (MQ=255)                                                                                                          cGAGTAACGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGttt                   >  1:449348/1‑140 (MQ=255)                                                                                                               aaCGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGTGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCaa              <  1:1311079/140‑1 (MQ=255)                                                                                                                aCGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAAc             >  2:28225/1‑140 (MQ=255)                                                                                                                 cGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAAcc            >  2:882890/1‑140 (MQ=255)                                                                                                                 cGAAGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAAcc            >  2:1084124/1‑140 (MQ=255)                                                                                                                   aaGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCAt          <  2:1503968/140‑1 (MQ=255)                                                                                                                    aGCCAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATg         <  1:671773/140‑1 (MQ=255)                                                                                                                      ccAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATGTc       >  2:93702/1‑140 (MQ=255)                                                                                                                      ccAGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATGTc       >  1:345354/1‑140 (MQ=255)                                                                                                                        aGCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCTGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATGTCGa     >  1:193363/1‑140 (MQ=255)                                                                                                                         gCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCTGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATGTCGAc    <  2:193363/140‑1 (MQ=255)                                                                                                                         gCTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATGTCGAc    <  1:882890/140‑1 (MQ=255)                                                                                                                          cTTTACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATGTCGAcc   >  1:1282984/1‑140 (MQ=255)                                                                                                                           tttACGCAGCTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATGTCGACCa  >  1:1019624/1‑140 (MQ=255)                                                                                                                                    |                                                                                                                                        AAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGTTCAGAACGCAGGGACTCGTCGTATTCCATCAGAGCGCGGGTGATACCGTGAC‑‑‑‑‑GGATCGCACCAGCCTGACCAGAGATACCACCACCTTTAACGGTGATGTACAGGTCCAGTTTCTCAACCATGTCGACCA  >  NC_000913/3377786‑3378047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑