Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,779,515 T→C I154I (ATT→ATC)  lldR → DNA‑binding transcriptional dual regulator LldR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,779,5150TC100.0% 310.5 / NA 88I154I (ATT→ATC) lldRDNA‑binding transcriptional dual regulator LldR
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/49);  total (39/49)

AAGCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGAACAACAT  >  NC_000913/3779379‑3779650
                                                                                                                                        |                                                                                                                                       
aaGCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGcc                                                                                                                                      <  2:1411474/140‑1 (MQ=255)
  gCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGa                                                                                                                                    <  2:790340/140‑1 (MQ=255)
  gCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGa                                                                                                                                    >  2:13111/1‑140 (MQ=255)
  gCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGa                                                                                                                                    >  1:130005/1‑140 (MQ=255)
  gCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGa                                                                                                                                    <  2:1532121/140‑1 (MQ=255)
    cAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAg                                                                                                                                  <  1:486932/140‑1 (MQ=255)
    cAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAg                                                                                                                                  >  2:1184711/1‑140 (MQ=255)
    cAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAg                                                                                                                                  <  2:1399864/140‑1 (MQ=255)
      gCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGcc                                                                                                                                <  2:174346/140‑1 (MQ=255)
       cACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCt                                                                                                                               <  2:477603/140‑1 (MQ=255)
       cACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCt                                                                                                                               >  2:339956/1‑140 (MQ=255)
        aCCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTc                                                                                                                              <  1:1419709/140‑1 (MQ=255)
           gcatggcatgCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTcaca                                                                                                                           <  2:881361/140‑1 (MQ=255)
            catggcatgCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACAt                                                                                                                          >  2:1503405/1‑140 (MQ=255)
            catggcatgCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACAt                                                                                                                          >  2:1257332/1‑140 (MQ=255)
                    gCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGcc                                                                                                                                <  2:32414/126‑1 (MQ=255)
                    gCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGcc                                                                                                                                >  1:32414/1‑126 (MQ=255)
                    gCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTcaca                                                                                                                           >  2:599124/1‑131 (MQ=255)
                    gCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTcaca                                                                                                                           <  1:599124/131‑1 (MQ=255)
                     gggCAATGCGCGCCACCCCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGtg                                                                                                                 <  1:63577/139‑1 (MQ=255)
                     cGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGtg                                                                                                                 <  2:130005/140‑1 (MQ=255)
                      ggCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTca                                                                                                                             <  1:1129507/127‑1 (MQ=255)
                      ggCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTca                                                                                                                             >  2:1129507/1‑127 (MQ=255)
                           tGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGTCTCACATAACATCGtgctgctg                                                                                                           >  2:128331/1‑140 (MQ=255)
                              gcgcCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCaa                                                                                                        <  2:1063133/140‑1 (MQ=255)
                               cgcCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCaaa                                                                                                       >  1:1122071/1‑140 (MQ=255)
                                 ccACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAAcc                                                                                                     <  2:1122071/140‑1 (MQ=255)
                                    cacCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATg                                                                                                  <  1:1160907/140‑1 (MQ=255)
                                        tGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGcgcg                                                                                              <  1:1051498/140‑1 (MQ=255)
                                            gtcAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGttt                                                                                          <  2:1040673/138‑1 (MQ=255)
                                            gACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATgcg                                                                                                >  1:540684/1‑134 (MQ=255)
                                            gACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATgcg                                                                                                <  2:540684/134‑1 (MQ=255)
                                                 agaaaagaTTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCg                                                                                     <  1:280577/140‑1 (MQ=255)
                                                 agaaaagaTTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATACCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCg                                                                                     >  2:1496416/1‑140 (MQ=255)
                                                      agaTTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTc                                                                                <  1:1257332/140‑1 (MQ=255)
                                                         ttCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTg                                                                             <  1:248889/140‑1 (MQ=255)
                                                         ttCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTg                                                                             <  1:1184711/140‑1 (MQ=255)
                                                         ttCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTg                                                                             >  2:43130/1‑140 (MQ=255)
                                                           cAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGTCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCa                                                                           <  1:128331/140‑1 (MQ=255)
                                                             gctttgctttGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAAt                                                                         >  1:468822/1‑140 (MQ=255)
                                                              ctttgctttgAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATc                                                                        <  1:1527229/140‑1 (MQ=255)
                                                              ctttgctttgAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATc                                                                        <  2:833541/140‑1 (MQ=255)
                                                                ttgctttgAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCt                                                                      <  1:608489/140‑1 (MQ=255)
                                                                ttgctttgAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCt                                                                      <  1:13111/140‑1 (MQ=255)
                                                                 tgctttgAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTc                                                                     >  2:692230/1‑140 (MQ=255)
                                                                   ctttgAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAg                                                                   >  2:753047/1‑140 (MQ=255)
                                                                        aaGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTg                                                                 <  2:493475/137‑1 (MQ=255)
                                                                        aaGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTg                                                                 >  1:493475/1‑137 (MQ=255)
                                                                             aCGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAg                                                         >  2:324459/1‑140 (MQ=255)
                                                                               gCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGcc                                                       <  1:1311173/140‑1 (MQ=255)
                                                                                   aGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCa                                                   <  2:1395401/140‑1 (MQ=255)
                                                                                   aGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCa                                                   >  1:1395401/1‑140 (MQ=255)
                                                                                    gTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAg                                                  <  1:753047/140‑1 (MQ=255)
                                                                                     tGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGc                                                 >  1:851763/1‑140 (MQ=255)
                                                                                     tGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGc                                                 >  2:1272260/1‑140 (MQ=255)
                                                                                      gAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCg                                                <  1:1272260/140‑1 (MQ=255)
                                                                                        aGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAg                                                                                                                                  >  2:777108/1‑56 (MQ=255)
                                                                                        aGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAg                                                                                                                                  <  1:777108/56‑1 (MQ=255)
                                                                                        aGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGa                                              >  2:828090/1‑140 (MQ=255)
                                                                                        aGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGa                                              >  2:538631/1‑140 (MQ=255)
                                                                                         gACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGAt                                             >  2:464176/1‑140 (MQ=255)
                                                                                             cGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTa                                          <  2:198065/139‑1 (MQ=255)
                                                                                             cGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTa                                          >  1:198065/1‑139 (MQ=255)
                                                                                               gATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCt                                       >  1:834739/1‑140 (MQ=255)
                                                                                               gATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCt                                       >  2:810250/1‑140 (MQ=255)
                                                                                                    cGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGc                                  >  2:792762/1‑140 (MQ=255)
                                                                                                    cGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGc                                  >  2:1078749/1‑140 (MQ=255)
                                                                                                      ccTCACAAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCa                                <  2:834739/140‑1 (MQ=255)
                                                                                                         cacaAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCg                             >  1:379100/1‑140 (MQ=255)
                                                                                                         cacaAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAACCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCg                             >  2:745088/1‑140 (MQ=255)
                                                                                                           caAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGt                           <  1:280831/140‑1 (MQ=255)
                                                                                                           caAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGt                           <  1:828090/140‑1 (MQ=255)
                                                                                                           caAGCGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGt                           <  1:324459/140‑1 (MQ=255)
                                                                                                               cGGACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGttttt                       >  1:1347145/1‑140 (MQ=255)
                                                                                                                 gACGTTCGTTTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTc                     >  2:992641/1‑140 (MQ=255)
                                                                                                                    gttcgttTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTcaca                  >  2:937725/1‑140 (MQ=255)
                                                                                                                     ttcgttTTCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACaa                 <  1:538631/140‑1 (MQ=255)
                                                                                                                         ttttCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGa             <  1:1496416/140‑1 (MQ=255)
                                                                                                                         ttttCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGa             <  1:43130/140‑1 (MQ=255)
                                                                                                                          tttCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGAc            <  1:745088/140‑1 (MQ=255)
                                                                                                                            tCATCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCg          >  1:225335/1‑140 (MQ=255)
                                                                                                                              aTCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGaa        <  1:992641/140‑1 (MQ=255)
                                                                                                                              aTCTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGaa        <  1:792762/140‑1 (MQ=255)
                                                                                                                                cTGGCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGaaca      >  2:564617/1‑140 (MQ=255)
                                                                                                                                  ggCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGaacaac    >  2:107077/1‑140 (MQ=255)
                                                                                                                                   gCGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGAacaaca   <  1:275297/140‑1 (MQ=255)
                                                                                                                                    cGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGAACAACAt  <  2:282293/140‑1 (MQ=255)
                                                                                                                                    cGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGAACAACAt  <  2:1347145/140‑1 (MQ=255)
                                                                                                                                    cGATCGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGAACAACAt  <  1:937725/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                       
AAGCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGAACAACAT  >  NC_000913/3779379‑3779650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑