BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,870,333	T→C	R319R (CGT→CGC)	cbrA →	colicin M resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,870,333	0	T	C	100.0%	385.3 / NA	109	R319R (CGT→CGC)	cbrA	colicin M resistance protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (54/55); total (54/55)

Only 100 of 110 total aligned reads displayed.

GGCGGGATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGTTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGCCCACCAGCA  >  NC_000913/3870198‑3870469

ggcggGATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTaa                                                                                                                                      <  1:272257/140‑1 (MQ=255)

  cggGATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTaaaa                                                                                                                                    >  1:3865/1‑140 (MQ=255)

   gggATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAAc                                                                                                                                   >  1:262668/1‑140 (MQ=255)

   gggATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAAc                                                                                                                                   >  1:712883/1‑140 (MQ=255)

     gATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAActc                                                                                                                                 <  1:1184773/140‑1 (MQ=255)

          aTCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCgg                                                                                                                            <  2:67639/140‑1 (MQ=255)

           tCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGc                                                                                                                           <  2:1488002/140‑1 (MQ=255)

            cAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCa                                                                                                                          <  2:1136465/140‑1 (MQ=255)

               cgcCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGa                                                                                                                       <  2:1330190/140‑1 (MQ=255)

               cgcCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGa                                                                                                                       <  2:1489993/140‑1 (MQ=255)

                gcCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGAt                                                                                                                      <  2:373747/140‑1 (MQ=255)

                 ccAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATa                                                                                                                     >  2:298157/1‑140 (MQ=255)

                         cTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAg                                                                                                             >  1:682101/1‑140 (MQ=255)

                              ggggATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGAt                                                                                                        >  2:502325/1‑140 (MQ=255)

                               gggATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATg                                                                                                       <  2:350192/140‑1 (MQ=255)

                                ggATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGc                                                                                                      >  2:705224/1‑140 (MQ=255)

                                      gCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTaaa                                                                                                                <  1:1236885/124‑1 (MQ=255)

                                      gCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTaaa                                                                                                                >  2:1236885/1‑124 (MQ=255)

                                      gCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGAcc                                                                                                >  2:285116/1‑140 (MQ=255)

                                         aTGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCa                                                                                             <  2:33921/140‑1 (MQ=255)

                                         aTGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCa                                                                                             <  2:262668/140‑1 (MQ=255)

                                          tGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCAc                                                                                            <  1:573199/140‑1 (MQ=255)

                                           gcgcTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCAcc                                                                                           >  2:1147781/1‑140 (MQ=255)

                                           gcgcTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCAcc                                                                                           >  1:787888/1‑140 (MQ=255)

                                           gcgcTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCAcc                                                                                           >  2:677114/1‑140 (MQ=255)

                                            cgcTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCg                                                                                          >  1:1327790/1‑140 (MQ=255)

                                            cgcTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCg                                                                                          >  2:1475742/1‑140 (MQ=255)

                                                ggATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCAc                                                                                            <  1:842014/134‑1 (MQ=255)

                                                ggATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCAc                                                                                            >  2:842014/1‑134 (MQ=255)

                                                 gATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCttt                                                                                     >  2:498993/1‑140 (MQ=255)

                                                    aGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAg                                                                                  <  1:1334480/140‑1 (MQ=255)

                                                      cacaGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCAcc                                                                                           >  1:687771/1‑129 (MQ=255)

                                                        caGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAg                                                                              <  1:979567/140‑1 (MQ=255)

                                                           aCATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTgg                                                                           >  2:354518/1‑140 (MQ=255)

                                                           aCATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTgg                                                                           >  1:1449601/1‑140 (MQ=255)

                                                           aCATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTgg                                                                           >  2:929472/1‑140 (MQ=255)

                                                           aCATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTgg                                                                           >  1:1142119/1‑140 (MQ=255)

                                                           aCATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTgg                                                                           >  2:897651/1‑140 (MQ=255)

                                                           aCATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTgg                                                                           >  2:608054/1‑140 (MQ=255)

                                                           aCATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTgg                                                                           >  1:1480457/1‑140 (MQ=255)

                                                              ttCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGAtt                                                                        <  1:677114/140‑1 (MQ=255)

                                                              ttCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGAtt                                                                        <  2:44894/140‑1 (MQ=255)

                                                              ttCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGAtt                                                                        <  2:787888/140‑1 (MQ=255)

                                                               tCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTa                                                                       >  2:151329/1‑140 (MQ=255)

                                                                cTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTAt                                                                      <  1:1475742/140‑1 (MQ=255)

                                                                cTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTAt                                                                      >  2:757847/1‑140 (MQ=255)

                                                                   cGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGGCCGCACCGGCTTTAAGAAAGTGGATTATgcg                                                                   >  2:218060/1‑140 (MQ=255)

                                                                   cGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATgcg                                                                   <  1:608054/140‑1 (MQ=255)

                                                                     ttCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCa                                                                 >  1:1401482/1‑140 (MQ=255)

                                                                     ttCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCa                                                                 <  1:1195729/140‑1 (MQ=255)

                                                                      tCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAg                                                                >  2:1257596/1‑140 (MQ=255)

                                                                      tCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAg                                                                <  1:705224/140‑1 (MQ=255)

                                                                       cGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAgt                                                               >  1:1113054/1‑140 (MQ=255)

                                                                          tgtTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAgtggt                                                            <  2:1497373/140‑1 (MQ=255)

                                                                          tgtTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAgtggt                                                            <  1:968324/140‑1 (MQ=255)

                                                                              aCTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTgg                                                        >  2:588832/1‑140 (MQ=255)

                                                                               cTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGc                                                       <  2:712883/140‑1 (MQ=255)

                                                                               cTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGc                                                       <  2:1480457/140‑1 (MQ=255)

                                                                                 gAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGcac                                                     <  1:757847/140‑1 (MQ=255)

                                                                                  aaGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAg                                                                <  1:1517752/128‑1 (MQ=255)

                                                                                  aaGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGcaca                                                    <  1:498993/140‑1 (MQ=255)

                                                                                  aaGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGcaca                                                    <  1:298157/140‑1 (MQ=255)

                                                                                  aaGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGcaca                                                    >  2:1487240/1‑140 (MQ=255)

                                                                                  aaGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGcaca                                                    <  2:1401482/140‑1 (MQ=255)

                                                                                  aaGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGcaca                                                    <  1:1317307/140‑1 (MQ=255)

                                                                                  aaGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGc                                                       <  2:1433327/137‑1 (MQ=255)

                                                                                  aaGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGc                                                       >  1:1433327/1‑137 (MQ=255)

                                                                                    gcagcCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACata                                                  >  2:185596/1‑140 (MQ=255)

                                                                                    gcagcCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGACTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACata                                                  >  1:1259053/1‑140 (MQ=255)

                                                                                      agcCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATAtt                                                >  1:1018085/1‑140 (MQ=255)

                                                                                       gcCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTc                                               >  2:929648/1‑140 (MQ=255)

                                                                                        ccAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTcc                                              >  1:733227/1‑140 (MQ=255)

                                                                                         cAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCca                                             <  2:733227/140‑1 (MQ=255)

                                                                                               aGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTg                                       <  1:134248/140‑1 (MQ=255)

                                                                                               aGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTg                                       <  2:1142119/140‑1 (MQ=255)

                                                                                               aGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTg                                       <  1:897651/140‑1 (MQ=255)

                                                                                                 cTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGaa                                     >  2:1168031/1‑140 (MQ=255)

                                                                                                 cTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGaa                                     >  1:801326/1‑140 (MQ=255)

                                                                                                  tCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAg                                    >  2:1288747/1‑140 (MQ=255)

                                                                                                   cAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAgg                                   <  1:1147781/140‑1 (MQ=255)

                                                                                                           cTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCca                                             <  1:537615/122‑1 (MQ=255)

                                                                                                           cTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCca                                             >  2:537615/1‑122 (MQ=255)

                                                                                                           cTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCa                           >  1:879874/1‑140 (MQ=255)

                                                                                                           cTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCa                           >  1:1246090/1‑140 (MQ=255)

                                                                                                           cTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCa                           >  1:1157190/1‑140 (MQ=255)

                                                                                                           cTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCa                           >  2:598876/1‑140 (MQ=255)

                                                                                                           cTTACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCa                           >  2:946909/1‑140 (MQ=255)

                                                                                                             tACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAAc                         <  2:682101/140‑1 (MQ=255)

                                                                                                             tACTGGCGCGCCACCCGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAAc                         <  1:598876/140‑1 (MQ=255)

                                                                                                                          cccGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCg            <  2:3865/140‑1 (MQ=255)

                                                                                                                          cccGCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCg            <  2:1246717/140‑1 (MQ=255)

                                                                                                                             gCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGccc         <  2:1246090/140‑1 (MQ=255)

                                                                                                                             gCAAACTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGccc         <  1:354518/140‑1 (MQ=255)

                                                                                                                                  cTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGCCCACcag    <  1:929648/140‑1 (MQ=255)

                                                                                                                                  cTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGCCCACcag    <  2:1018085/140‑1 (MQ=255)

                                                                                                                                  cTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGCCCACcag    <  1:151329/140‑1 (MQ=255)

                                                                                                                                  cTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGCCCACcag    <  1:285116/140‑1 (MQ=255)

                                                                                                                                  cTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGCCCACcag    <  1:588832/140‑1 (MQ=255)

                                                                                                                                  cTGCGCTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGACTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGCCCACcag    <  2:1259053/140‑1 (MQ=255)

                                                                                                                                    gcgcTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGCCCACcagca  <  1:1168031/140‑1 (MQ=255)

GGCGGGATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGTTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAGCCAACGCGCTTCACATCGCCCACCAGCA  >  NC_000913/3870198‑3870469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`