BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,638,322	A→G	T49A (ACC→GCC)	creD →	putative inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,638,322	0	A	G	100.0%	510.1 / NA	148	T49A (ACC→GCC)	creD	putative inner membrane protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (76/72); total (76/72)

Only 100 of 148 total aligned reads displayed.

CCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATGGT  >  NC_000913/4638189‑4638458

cccccTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCg                                                                                                                                    >  1:967134/1‑140 (MQ=255)

cccccTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCg                                                                                                                                    >  1:424296/1‑140 (MQ=255)

cccccTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCg                                                                                                                                    >  2:1150404/1‑140 (MQ=255)

cccccTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCg                                                                                                                                    >  2:569693/1‑140 (MQ=255)

     tGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCg                                                                                                                               <  2:967134/140‑1 (MQ=255)

       ttCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCa                                                                                                                             <  2:163881/140‑1 (MQ=255)

           ggAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCaaaaa                                                                                                                         >  2:1133165/1‑140 (MQ=255)

                    cTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTggg                                                                                                                <  2:97555/140‑1 (MQ=255)

                    cTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTggg                                                                                                                <  2:650907/140‑1 (MQ=255)

                     tAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGc                                                                                                               <  1:1405174/140‑1 (MQ=255)

                         cTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCt                                                                                                           <  1:1309020/140‑1 (MQ=255)

                          tGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTc                                                                                                          <  2:62635/140‑1 (MQ=255)

                          tGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTc                                                                                                          <  1:814356/140‑1 (MQ=255)

                           gTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCa                                                                                                         >  2:1107299/1‑140 (MQ=255)

                            tttGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCt                                                                                                           >  2:1136019/1‑137 (MQ=255)

                            tttGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCt                                                                                                           <  1:1136019/137‑1 (MQ=255)

                            tttGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCAt                                                                                                        <  1:172113/140‑1 (MQ=255)

                              tGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGCAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                                                      <  2:1392767/140‑1 (MQ=255)

                                gTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCt                                                                                                    <  1:569693/140‑1 (MQ=255)

                                 tGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTggg                                                                                                                <  2:725005/127‑1 (MQ=255)

                                 tGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTggg                                                                                                                >  1:725005/1‑127 (MQ=255)

                                 tGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTa                                                                                                   >  2:235521/1‑140 (MQ=255)

                                 tGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTa                                                                                                   >  2:387988/1‑140 (MQ=255)

                                 tGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTa                                                                                                   >  1:1421067/1‑140 (MQ=255)

                                  gCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAATGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCtgt                                                                                                  >  2:1418445/1‑138 (MQ=255)

                                   cAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTAtt                                                                                                 >  1:420779/1‑140 (MQ=255)

                                      tATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCt                                                                                                           >  2:1129047/1‑127 (MQ=255)

                                      tATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCt                                                                                                           <  1:1129047/127‑1 (MQ=255)

                                           cTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGTCGCAAAAACTCGTTGGGCCGCTc                                                                                                          <  1:579366/123‑1 (MQ=255)

                                           cTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGTCGCAAAAACTCGTTGGGCCGCTc                                                                                                          >  2:579366/1‑123 (MQ=255)

                                           cTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAc                                                                                         >  2:874266/1‑140 (MQ=255)

                                           cTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAc                                                                                         >  1:725898/1‑140 (MQ=255)

                                           cTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGAGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAc                                                                                         >  1:1021429/1‑140 (MQ=255)

                                            tgttgtTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAcc                                                                                        <  1:1025891/140‑1 (MQ=255)

                                            tgttgtTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAcc                                                                                        <  2:842887/140‑1 (MQ=255)

                                            tgttgtTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAcc                                                                                        <  1:1428749/140‑1 (MQ=255)

                                              ttgttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                                                      <  2:696161/140‑1 (MQ=255)

                                              ttgttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                                                      >  1:294665/1‑140 (MQ=255)

                                              ttgttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                                                      >  1:326047/1‑140 (MQ=255)

                                                gttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTAt                                                                                                  <  1:602851/126‑1 (MQ=255)

                                                gttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                                                      <  2:772372/138‑1 (MQ=255)

                                                gttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                                                      >  1:772372/1‑138 (MQ=255)

                                                gttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGc                                                                                    >  1:298781/1‑140 (MQ=255)

                                                      tCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAcc                                                                                        <  1:1498717/130‑1 (MQ=255)

                                                      tCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAcc                                                                                        >  2:1498717/1‑130 (MQ=255)

                                                      tCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                                              <  1:1008691/140‑1 (MQ=255)

                                                      tCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                                              <  2:420779/140‑1 (MQ=255)

                                                       ccGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                                                             <  1:1526343/140‑1 (MQ=255)

                                                       ccGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                                                             <  2:271418/140‑1 (MQ=255)

                                                       ccGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                                                             <  2:649579/140‑1 (MQ=255)

                                                       ccGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                                                             <  1:517769/140‑1 (MQ=255)

                                                        cGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                                                             <  2:1100909/139‑1 (MQ=255)

                                                        cGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACg                                                                            >  2:1341924/1‑140 (MQ=255)

                                                        cGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACg                                                                            <  1:1150404/140‑1 (MQ=255)

                                                              tGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAg                                                                      >  1:927581/1‑140 (MQ=255)

                                                                   aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAaga                                                                 >  2:163369/1‑140 (MQ=255)

                                                                        gCAGGTGATTGTCGACCGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATa                                                            <  1:235521/140‑1 (MQ=255)

                                                                         cAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACg                                                                            <  1:865814/123‑1 (MQ=255)

                                                                         cAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACg                                                                            >  2:865814/1‑123 (MQ=255)

                                                                              ggctGTCGAACGTTGTGATTACCGTAGGGATGGGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGGCGCTCAACGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCg                                                      <  2:503448/137‑1 (MQ=255)

                                                                               aTTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCgg                                                     >  1:503448/1‑139 (MQ=255)

                                                                                ttGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                                    <  2:725898/140‑1 (MQ=255)

                                                                                   tCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAg                                                 <  1:874266/140‑1 (MQ=255)

                                                                                         gTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGaaa                                           >  2:359171/1‑140 (MQ=255)

                                                                                           gCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACg                                         >  1:526428/1‑140 (MQ=255)

                                                                                            cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGa                                        >  2:20437/1‑140 (MQ=255)

                                                                                            cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGa                                        >  2:886673/1‑140 (MQ=255)

                                                                                            cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGa                                        >  1:218574/1‑140 (MQ=255)

                                                                                               aTTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGt                                     >  1:710538/1‑140 (MQ=255)

                                                                                                 tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt                                   >  1:345709/1‑140 (MQ=255)

                                                                                                    cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt                                <  1:1129408/140‑1 (MQ=255)

                                                                                                    cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt                                <  2:298781/140‑1 (MQ=255)

                                                                                                     gTAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATc                               <  1:20437/140‑1 (MQ=255)

                                                                                                      tAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATcc                              >  1:495585/1‑140 (MQ=255)

                                                                                                      tAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATcc                              >  2:1289264/1‑140 (MQ=255)

                                                                                                      tAGCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATcc                              >  1:424867/1‑140 (MQ=255)

                                                                                                        gCGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAt                            <  2:1289178/140‑1 (MQ=255)

                                                                                                         cGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTTGAGCGGAAACGAAGTTTTATCCAtt                           >  2:196009/1‑140 (MQ=255)

                                                                                                         cGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACg                                         <  1:671330/126‑1 (MQ=255)

                                                                                                         cGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACg                                         >  2:671330/1‑126 (MQ=255)

                                                                                                         cGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtt                           >  2:745964/1‑140 (MQ=255)

                                                                                                         cGATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtt                           >  2:428312/1‑140 (MQ=255)

                                                                                                          gATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAttt                          <  2:294665/140‑1 (MQ=255)

                                                                                                          gATGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAttt                          <  2:1477455/140‑1 (MQ=255)

                                                                                                           aTGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtttt                         >  1:134553/1‑140 (MQ=255)

                                                                                                           aTGTGGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtttt                         >  2:60347/1‑140 (MQ=255)

                                                                                                              tgGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg                      >  1:1176412/1‑140 (MQ=255)

                                                                                                              tgGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg                      >  1:845902/1‑140 (MQ=255)

                                                                                                              tgGAAGATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg                      <  1:745964/140‑1 (MQ=255)

                                                                                                                   gATGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAcc                 <  1:1289264/140‑1 (MQ=255)

                                                                                                                    aTGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCt                <  1:1177518/140‑1 (MQ=255)

                                                                                                                    aTGCGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCt                <  1:642527/140‑1 (MQ=255)

                                                                                                                       cGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAg             <  2:319706/140‑1 (MQ=255)

                                                                                                                       cGATTCGCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAg             <  2:1421067/140‑1 (MQ=255)

                                                                                                                             gCCAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttg       <  2:424867/140‑1 (MQ=255)

                                                                                                                              ccAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttga      <  2:495585/140‑1 (MQ=255)

                                                                                                                              ccAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttga      <  1:886673/140‑1 (MQ=255)

                                                                                                                               cAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttgat     >  2:2643/1‑140 (MQ=255)

                                                                                                                               cAAAGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttgat     >  1:810899/1‑140 (MQ=255)

                                                                                                                                  aGTGCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttgatggt  <  2:1176412/140‑1 (MQ=255)

CCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATGGT  >  NC_000913/4638189‑4638458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`