Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,504,395	T→C	S31G (AGC→GGC)	fryA ←	putative PTS multiphosphoryl transfer protein FryA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,504,395	0	T	C	100.0%	328.6 / NA	93	S31G (AGC→GGC)	fryA	putative PTS multiphosphoryl transfer protein FryA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/55);  total (38/55)

CGCCTGCTCTTCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCTTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTT  >  NC_000913/2504261‑2504529                                                                                                                                       |                                                                                                                                       cgccTGCTCTTCATCGCTGCCGCTAATGTTCAGGCTGTAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGcc                                                                                                                                   <  1:776761/140‑1 (MQ=255) cgccTGCTCTTCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGcc                                                                                                                                   <  2:1317636/140‑1 (MQ=255)  gccTGCTCTTCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCa                                                                                                                                  <  2:411748/140‑1 (MQ=255)  gccTGCTCTTCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCAGCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCa                                                                                                                                  <  2:403074/140‑1 (MQ=255)   ccTGCTCTTCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCAc                                                                                                                                 <  2:695183/140‑1 (MQ=255)         ctTCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTg                                                                                                                           <  1:1325535/140‑1 (MQ=255)         ctTCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTg                                                                                                                           <  2:1323757/140‑1 (MQ=255)           tCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGcc                                                                                                                                   <  2:1141412/130‑1 (MQ=255)           tCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGcc                                                                                                                                   >  1:1141412/1‑130 (MQ=255)           tCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCa                                                                                                                         <  2:661492/140‑1 (MQ=255)           tCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGAGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCa                                                                                                                         <  2:905905/140‑1 (MQ=255)            cATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCAc                                                                                                                        <  1:845904/140‑1 (MQ=255)            cATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCAc                                                                                                                        <  1:1408786/140‑1 (MQ=255)            cATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCAc                                                                                                                        <  2:1446105/140‑1 (MQ=255)              tCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTg                                                                                                                      >  2:448276/1‑140 (MQ=255)                 cTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTc                                                                                                                   >  1:485776/1‑140 (MQ=255)                  tGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCt                                                                                                                  <  2:242157/140‑1 (MQ=255)                               cAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACg                                                                                                     >  1:1215054/1‑140 (MQ=255)                                aGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACg                                                                                                     <  1:1090335/139‑1 (MQ=255)                                aGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACg                                                                                                     >  2:1090335/1‑139 (MQ=255)                                    tGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                <  2:485776/140‑1 (MQ=255)                                    tGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                <  2:870194/140‑1 (MQ=255)                                    tGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                <  1:881360/140‑1 (MQ=255)                                    tGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                <  1:23959/140‑1 (MQ=255)                                    tGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                <  1:64086/140‑1 (MQ=255)                                    tGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTCGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                <  2:1222956/140‑1 (MQ=255)                                     gCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGAc                                                                                               >  2:1476723/1‑140 (MQ=255)                                      cAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACg                                                                                              <  2:1264092/140‑1 (MQ=255)                                      cAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACg                                                                                              <  2:780713/140‑1 (MQ=255)                                      cAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACg                                                                                              >  1:780713/1‑140 (MQ=255)                                      cAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACg                                                                                              <  2:545175/140‑1 (MQ=255)                                       aaCTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                <  2:1126633/137‑1 (MQ=255)                                       aaCTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                >  1:1126633/1‑137 (MQ=255)                                       aaCTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                <  1:843416/137‑1 (MQ=255)                                       aaCTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                >  2:843416/1‑137 (MQ=255)                                       aaCTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGa                                                                                             <  1:579842/140‑1 (MQ=255)                                        aCTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAg                                                                                            <  1:197474/140‑1 (MQ=255)                                        aCTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAg                                                                                            <  2:1157567/140‑1 (MQ=255)                                            tCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATg                                                                                        >  1:1283499/1‑140 (MQ=255)                                              aTTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTa                                                                                      <  2:1296427/140‑1 (MQ=255)                                                   aTAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCg                                                                                 >  1:649914/1‑140 (MQ=255)                                                    tAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                <  1:396359/124‑1 (MQ=255)                                                    tAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGa                                                                                                >  2:396359/1‑124 (MQ=255)                                                      gggTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGtt                                                                               >  2:580468/1‑139 (MQ=255)                                                      gggTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGtt                                                                               <  1:580468/139‑1 (MQ=255)                                                      gggTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTa                                                                              >  1:926833/1‑140 (MQ=255)                                                        gtgccggtgccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGtt                                                                               >  1:6450/1‑137 (MQ=255)                                                        gtgccggtgccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGtt                                                                               <  2:6450/137‑1 (MQ=255)                                                        gtgccggtgccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAgg                                                                            >  2:353082/1‑140 (MQ=255)                                                         tgccggtgccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGc                                                                           >  2:789293/1‑140 (MQ=255)                                                         tgccggtgccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGc                                                                           <  1:1450425/140‑1 (MQ=255)                                                           ccggtgccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCaa                                                                         >  1:1032027/1‑140 (MQ=255)                                                              gtgccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGtt                                                                               <  2:1366905/131‑1 (MQ=255)                                                              gtgccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGtt                                                                               >  1:1366905/1‑131 (MQ=255)                                                              gtgccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAgg                                                                      >  2:335160/1‑140 (MQ=255)                                                                 ccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGa                                                                                    >  2:268852/1‑123 (MQ=255)                                                                 ccAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGa                                                                                    <  1:268852/123‑1 (MQ=255)                                                                         cgcCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAAtt                                                           >  2:132031/1‑140 (MQ=255)                                                                           ccAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGa                                                         <  1:848170/140‑1 (MQ=255)                                                                            cAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGaa                                                        <  1:190489/140‑1 (MQ=255)                                                                              gCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATc                                                      >  2:58655/1‑140 (MQ=255)                                                                               cGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCg                                                     <  1:1476723/140‑1 (MQ=255)                                                                                      ttCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACAt                                              >  2:1210982/1‑140 (MQ=255)                                                                                      ttCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACAt                                              >  2:1065165/1‑140 (MQ=255)                                                                                        cGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATaa                                            <  2:1283499/140‑1 (MQ=255)                                                                                        cGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATaa                                            >  2:1027031/1‑140 (MQ=255)                                                                                             cTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCt                                       <  2:926833/140‑1 (MQ=255)                                                                                             cTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCt                                       <  1:789293/140‑1 (MQ=255)                                                                                                ccTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCg                                    >  2:304883/1‑140 (MQ=255)                                                                                                ccTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCg                                    >  1:825304/1‑140 (MQ=255)                                                                                                  tttGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCggg                                  <  1:448276/140‑1 (MQ=255)                                                                                                   ttGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGt                                 <  1:1016948/140‑1 (MQ=255)                                                                                                   ttGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGt                                 <  1:683135/140‑1 (MQ=255)                                                                                                   ttGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGt                                 <  2:1032027/140‑1 (MQ=255)                                                                                                   ttGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGt                                 <  2:1215054/140‑1 (MQ=255)                                                                                                     gCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTa                               >  2:136211/1‑140 (MQ=255)                                                                                                        ttCTGGCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATc                            <  2:473937/140‑1 (MQ=255)                                                                                                             gCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGgag                       <  1:1027031/140‑1 (MQ=255)                                                                                                             gCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGgag                       >  2:1422565/1‑140 (MQ=255)                                                                                                             gCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGgag                       <  1:1422565/140‑1 (MQ=255)                                                                                                             gCGATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGgag                       <  1:335160/140‑1 (MQ=255)                                                                                                               gATGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGat                     <  1:342321/140‑1 (MQ=255)                                                                                                                aTGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGatc                    >  1:716610/1‑140 (MQ=255)                                                                                                                aTGGTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGatc                    >  1:464151/1‑140 (MQ=255)                                                                                                                  ggTTAATAAAAGTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGatcat                  <  1:353082/140‑1 (MQ=255)                                                                                                                             gTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGt       >  1:678319/1‑140 (MQ=255)                                                                                                                             gTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGt       >  2:717054/1‑140 (MQ=255)                                                                                                                             gTGATTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGt       >  2:1453612/1‑140 (MQ=255)                                                                                                                                aTTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGat                     <  2:673582/123‑1 (MQ=255)                                                                                                                                aTTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGat                     >  1:673582/1‑123 (MQ=255)                                                                                                                                aTTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAg    <  2:649914/140‑1 (MQ=255)                                                                                                                                aTTTCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAg    >  1:749806/1‑140 (MQ=255)                                                                                                                                  ttCGCCTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGtt  >  2:170193/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                       CGCCTGCTCTTCATCGCTGCCGCTAATGTTCAGGCTGCAACTGTCATTAAATAGGGTGCCGGTGCCAATCAGCGCCAGCGAGCTTTTCGCATCTGCCTTTGCGTTCTGGCGATGGTTAATAAAAGTGATTTCGCTTTGCCACTGGCTGCACTGTTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTT  >  NC_000913/2504261‑2504529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑