BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,166,883	A→G	L279P (CTG→CCG)	ygiS ←	putative deoxycholate binding periplasmic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,166,883	0	A	G	100.0%	373.1 / NA	106	L279P (CTG→CCG)	ygiS	putative deoxycholate binding periplasmic protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (51/55); total (51/55)

Only 100 of 106 total aligned reads displayed.

TGCGCAATAAGCTGTCGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCAGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCG  >  NC_000913/3166751‑3167018

tGCGCAATAAGCTGTCGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGAttt                                                                                                                                       >  2:669355/1‑140 (MQ=255)

    cAATAAGCTGTCGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCa                                                                                                                                   <  2:47820/140‑1 (MQ=255)

    cAATAAGCTGTCGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCa                                                                                                                                   <  2:751087/140‑1 (MQ=255)

     aaTAAGCTGTCGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCaa                                                                                                                                  <  1:1310184/140‑1 (MQ=255)

     aaTAAGCTGTCGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCaa                                                                                                                                  <  1:1289851/140‑1 (MQ=255)

       tAAGCTGTCGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATg                                                                                                                                >  1:1010900/1‑140 (MQ=255)

           cTGTCGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑gg                                                                                                                           <  1:1368102/140‑1 (MQ=255)

               cGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑g                                                                                                                            >  1:1060769/1‑135 (MQ=255)

                 aTCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GAttt                                                                                                                    >  2:1390894/1‑140 (MQ=255)

                     aCCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTtgctg                                                                                                                >  1:1155452/1‑140 (MQ=255)

                     aCCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTtgctg                                                                                                                >  1:133330/1‑140 (MQ=255)

                        gTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTgcg‑c                                                                                                            >  2:417349/1‑140 (MQ=255)

                         tAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGCGGGG‑AATTTGCTgcg‑c                                                                                                            >  1:1062480/1‑140 (MQ=255)

                          aaGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCg                                                                                                          <  1:523583/140‑1 (MQ=255)

                          aaGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCg                                                                                                          <  2:368791/140‑1 (MQ=255)

                          aaGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCg                                                                                                          <  1:1154794/140‑1 (MQ=255)

                          aaGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCg                                                                                                          <  1:1390894/140‑1 (MQ=255)

                          aaGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCg                                                                                                          <  2:727166/140‑1 (MQ=255)

                          aaGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCg                                                                                                          <  2:631116/140‑1 (MQ=255)

                              tataGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AAc                                                                                                    >  1:537379/1‑140 (MQ=255)

                              tataGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AAc                                                                                                    <  2:199409/140‑1 (MQ=255)

                              tataGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AAc                                                                                                    <  1:1520975/140‑1 (MQ=255)

                               ataGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AAcc                                                                                                   <  1:1443365/140‑1 (MQ=255)

                                taGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AAccc                                                                                                  >  1:1411513/1‑140 (MQ=255)

                                taGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AAccc                                                                                                  >  1:1199117/1‑140 (MQ=255)

                                 aGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GATTTGCTGCG‑CCG‑G‑AACCCa                                                                                                 >  1:1325347/1‑140 (MQ=255)

                                  gcgcCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAg                                                                                                <  1:669355/140‑1 (MQ=255)

                                   cgcCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAgg                                                                                               <  1:341306/140‑1 (MQ=255)

                                     cccGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGGTAATTTCTTGCC‑CCG‑G‑ACCCCAgag                                                                                              >  2:341306/1‑138 (MQ=255)

                                     cccGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCAGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCg                                                                                                          <  1:869155/129‑1 (MQ=255)

                                     cccGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCAGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCg                                                                                                          >  2:869155/1‑129 (MQ=255)

                                       cGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GATTtgctg                                                                                                                >  1:288223/1‑122 (MQ=255)

                                       cGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GAATTTCTGCGCCCG‑A‑AACCCAggggg                                                                                            >  2:1520975/1‑137 (MQ=255)

                                       cGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTtgctg                                                                                                                <  2:288223/122‑1 (MQ=255)

                                       cGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTTCTGCG‑CCG‑G‑AACCCAGGGgag                                                                                           >  1:1354342/1‑140 (MQ=255)

                                       cGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AAc                                                                                                    <  1:1284597/131‑1 (MQ=255)

                                       cGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AAc                                                                                                    >  2:1284597/1‑131 (MQ=255)

                                        gACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GATTTTCTGCG‑CCG‑GAAACCCAggggga                                                                                           >  2:1111786/1‑136 (MQ=255)

                                        gACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GATTTGCTGCG‑CCC‑G‑GACCCCgggggga                                                                                          >  2:345583/1‑135 (MQ=255)

                                        gACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTgaga                                                                                          <  1:1111786/140‑1 (MQ=255)

                                          cGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GATTTTCTGCG‑CCGCG‑AACCCggggggatc                                                                                         >  2:732268/1‑134 (MQ=255)

                                          cGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATc                                                                                        >  1:477559/1‑140 (MQ=255)

                                              cTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAgg                                                                                               >  1:1303289/1‑129 (MQ=255)

                                              cTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAgg                                                                                               <  2:1303289/129‑1 (MQ=255)

                                                   acaTCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTcc                                                                               >  1:456279/1‑140 (MQ=255)

                                                     aTCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCcg                                                                             <  1:417349/140‑1 (MQ=255)

                                                       cGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGTTGCG‑GCC‑G‑AAACCAGGGGGAATCGACCCCTCCcggg                                                                           >  2:1363746/1‑138 (MQ=255)

                                                       cGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGGCGCG‑CCG‑G‑AACCCAGGGGGGATCGAccccccccccc                                                                           >  2:835496/1‑137 (MQ=255)

                                                       cGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCcgcg                                                                           >  1:882327/1‑140 (MQ=255)

                                                       cGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCcgcg                                                                           <  2:1199117/140‑1 (MQ=255)

                                                        gTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGCGGGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCcgcg                                                                           <  2:1062480/140‑1 (MQ=255)

                                                         ttAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GAATTGCTGCG‑CCG‑G‑GACCCCGGGGAGATCGACCTCTCCcccgcg                                                                         >  2:53900/1‑140 (MQ=255)

                                                         ttAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AAATTGCTTCG‑CCC‑G‑GAACCAGGTGAGATCGACCTCTCCcgcgcg                                                                         >  1:1325405/1‑140 (MQ=255)

                                                            aaTGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATa                                                                      <  2:1263078/140‑1 (MQ=255)

                                                             aTGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAg                                                                     <  2:1411513/140‑1 (MQ=255)

                                                               ggCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCg                                                                   <  2:498689/140‑1 (MQ=255)

                                                               ggCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCg                                                                   >  1:896723/1‑140 (MQ=255)

                                                                 cGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GATTTTGCGGA‑CCG‑G‑AACCCACGTGAGAACGACCTCTCCCGCCCGATAGCggg                                                                 >  2:1266489/1‑139 (MQ=255)

                                                                 cGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGt                                                                 >  1:522233/1‑140 (MQ=255)

                                                                 cGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGt                                                                 >  1:93023/1‑140 (MQ=255)

                                                                 cGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGt                                                                 >  1:38905/1‑140 (MQ=255)

                                                                 cGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGC‑GAATTGCTGCG‑CCG‑G‑AACCCCGGGGAGATCGACCTCTCCCCCGCGATAGCggg                                                                 >  2:949792/1‑139 (MQ=255)

                                                                             gTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGa                                                     <  2:882327/140‑1 (MQ=255)

                                                                             gTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGa                                                     <  1:243553/140‑1 (MQ=255)

                                                                                 aaGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGGGAGATCGACCTCTCCCGCGCGATAGCGGGTATAGCCGGGGACCGa                                                 >  2:1262785/1‑140 (MQ=255)

                                                                                       tAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATc                                           <  1:949792/140‑1 (MQ=255)

                                                                                         atatTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTa                                         <  1:1405383/140‑1 (MQ=255)

                                                                                          tatTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAg                                        <  2:1325347/140‑1 (MQ=255)

                                                                                             tCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAgcgc                                     <  1:345583/140‑1 (MQ=255)

                                                                                              cGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGcc                                    >  1:550969/1‑140 (MQ=255)

                                                                                               gCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCa                                   >  2:125347/1‑140 (MQ=255)

                                                                                               gCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCa                                   <  2:1010900/140‑1 (MQ=255)

                                                                                                cTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAg                                  <  2:486836/140‑1 (MQ=255)

                                                                                                 tGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGa                                 <  1:779949/140‑1 (MQ=255)

                                                                                                 tGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGGTATAGCCGGGGAACGAATTATCTAGCGCCCGa                                 >  2:75774/1‑140 (MQ=255)

                                                                                                       gACGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCa                           <  1:911477/140‑1 (MQ=255)

                                                                                                        aCGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCCGGTGAGAACGAACTCTCCCCCGCGATAGCGGGTATAGCCGGGGGCCGCATTATCTAGCGCCAGATACTCaa                          >  2:911477/1‑140 (MQ=255)

                                                                                                        aCGCGGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCaa                          <  2:477559/140‑1 (MQ=255)

                                                                                                          gcgGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAAcc                        <  1:597198/140‑1 (MQ=255)

                                                                                                          gcgGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAAcc                        <  1:1266489/140‑1 (MQ=255)

                                                                                                           cgGAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCt                       >  1:971313/1‑140 (MQ=255)

                                                                                                            ggAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTg                      <  2:813792/140‑1 (MQ=255)

                                                                                                             gAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑GATTTTGTGGG‑CCG‑G‑AACCCAGGGGAGATCGACCTCTCCCGCCCGGTAGGGGTTTTAAGCGGGGGCCGAAATATCTAGCGCCCGGTACTCaaaccgt                     >  2:358301/1‑135 (MQ=255)

                                                                                                             gAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGt                     >  1:1409158/1‑140 (MQ=255)

                                                                                                             gAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGt                     <  2:896723/140‑1 (MQ=255)

                                                                                                             gAATAATTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGGGAGATCGACCTCTCCCCCGCGATAGCGGGTATAGCCGGGGGCCGAATTATCTAGCGCCAGATACTCAACCTGt                     >  2:934162/1‑140 (MQ=255)

                                                                                                               ataatTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTg                   <  2:1499585/140‑1 (MQ=255)

                                                                                                               ataatTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTg                   <  2:133330/140‑1 (MQ=255)

                                                                                                               ataatTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTg                   <  2:971313/140‑1 (MQ=255)

                                                                                                               ataatTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTg                   <  1:125347/140‑1 (MQ=255)

                                                                                                               ataatTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTg                   <  2:1155452/140‑1 (MQ=255)

                                                                                                                taatTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGc                  <  2:522233/140‑1 (MQ=255)

                                                                                                                 aatTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGTTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGCa                 <  1:1363746/140‑1 (MQ=255)

                                                                                                                 aatTCGTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGCa                 <  2:809366/140‑1 (MQ=255)

                                                                                                                      gTAGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGCAATACt            <  1:99420/140‑1 (MQ=255)

                                                                                                                        aGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTTCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGGGACCCAATTATTTAGCGCCAGATACTCAACCTGTTGCAATACTGt          >  2:1254011/1‑140 (MQ=255)

                                                                                                                        aGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGCAATACTGt          <  2:550969/140‑1 (MQ=255)

                                                                                                                        aGCTCGCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGGTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGCAATACTGt          >  2:1121976/1‑140 (MQ=255)

                                                                                                                             gCCAGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGtt     >  1:459037/1‑140 (MQ=255)

                                                                                                                                aGGCGGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTgcg  <  2:1325405/140‑1 (MQ=255)

TGCGCAATAAGCTGTCGATCAACCGTAAGATATAGCGCCCGACGCACTCGCACATCGTTAAATGGCGGTTTCTCAAGGTTGAAGTTGTAATATTCGCTGTTCAGACGCGGAATAATTCGTAGCTCGCCAGGCAGTGATTTTTCAATGGC‑GGG‑AATTTGCTGCG‑CCG‑G‑AACCCAGGTGAGATCGACCTCTCCCGCGCGATAGCGGTTATAGCCGGTGACCGAATTATCTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCG  >  NC_000913/3166751‑3167018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`