| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,551,302 | (T)5→6 | coding (1172/2394 nt) | malP ← | maltodextrin phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,551,297 | 1 | . | T | 98.8% | 284.5 / ‑3.5 | 82 | coding (1177/2394 nt) | malP | maltodextrin phosphorylase |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base T (37/44); total (38/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTGATATTCCGGGAACAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACAC‑TT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAT > NC_000913/3551160‑3551429 | gTGATATTCCGGGAACAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACAC‑tt > 2:650786/1‑140 (MQ=255) tGATATTCCGGGAACAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACAC‑tt‑t > 2:531408/1‑140 (MQ=255) atTCCGGGAACAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACAC‑tt‑ttttc > 1:1002318/1‑138 (MQ=255) tCCGGGAACAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACAC‑tt‑ttttcat > 1:638290/1‑136 (MQ=255) tCCGGGAACAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACAC‑TTCTTT‑CAt > 1:1591698/1‑140 (MQ=255) ggAACAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGcc > 2:995044/1‑140 (MQ=255) cAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCATACTTT‑TTT‑CATCGCCCGGc < 2:1110794/140‑1 (MQ=255) cAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGc < 1:1181814/140‑1 (MQ=255) cAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGc < 2:50362/140‑1 (MQ=255) cAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGc < 1:132208/140‑1 (MQ=255) cAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGc > 2:1121650/1‑140 (MQ=255) aTCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAg < 1:67291/140‑1 (MQ=255) aTCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAg > 1:773613/1‑140 (MQ=255) tccccaccaGATCCGAGTGCAGCGCCGCAACACCGTTCCCCGCGAACCCGCCAACCACACACAGGTTCGCCATATTCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGtttt < 2:328569/137‑1 (MQ=255) tCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGtttt > 1:1249517/1‑140 (MQ=255) tCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGtttt > 2:867519/1‑140 (MQ=255) tCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGtttt > 2:788493/1‑140 (MQ=255) caccacCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTtc < 2:412807/140‑1 (MQ=255) ccaccaGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTtctc < 1:436561/140‑1 (MQ=255) ccaGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCACCCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTAc < 2:325059/140‑1 (MQ=255) ccaGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTAc < 2:1458410/140‑1 (MQ=255) caGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTAcc > 1:1306996/1‑140 (MQ=255) aGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCa > 1:879720/1‑140 (MQ=255) gATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAg < 2:430004/140‑1 (MQ=255) aTCCGAGTGCAGCGCCGCAACACGTTTCCCCGGGAAGCCGCCAGCCACACACAGGCTCGCCATACGCTCTTGTTTGTGGTGCACCACCGCCAGTTTGGCCCGCACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGc < 2:1057537/140‑1 (MQ=255) aTCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGc > 2:724108/1‑140 (MQ=255) aTCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGc > 2:1039824/1‑140 (MQ=255) ccGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGt > 1:1403322/1‑140 (MQ=255) ccGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGt > 1:526134/1‑140 (MQ=255) tGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTaa > 1:1250796/1‑140 (MQ=255) ggcgcCGCAACCCCGTTCCCCGCGAACCCGCCAACCACCCACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGc < 2:81487/139‑1 (MQ=255) aGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGc > 2:840564/1‑140 (MQ=255) cgccgcAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGa > 1:63616/1‑140 (MQ=255) cgccgcAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGa > 1:1112630/1‑140 (MQ=255) cgccgcAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGa > 1:561888/1‑140 (MQ=255) cgccgcAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGa > 2:1440503/1‑140 (MQ=255) ccccGTCCCCCGCGAACCCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAAt < 2:1585855/138‑1 (MQ=255) ccccGTCCCCCGCGAACCCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAAt < 2:1571252/138‑1 (MQ=255) ccttcccccGCGAAACCGCCACCCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCCCCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAAttt < 2:1591698/133‑1 (MQ=255) ccGTTCACCGCGAACCCGCCAACCACACACAGGTCCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAAttt < 2:773613/140‑1 (MQ=255) ccGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAAttt < 1:531408/140‑1 (MQ=255) ttCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGt > 1:1029305/1‑140 (MQ=255) ttCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGt > 2:374757/1‑140 (MQ=255) cACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTta < 1:995044/140‑1 (MQ=255) cACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTta < 1:370814/140‑1 (MQ=255) aCCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTtaa < 1:650786/140‑1 (MQ=255) ccGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTtaat < 2:1447480/140‑1 (MQ=255) gCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCAtg < 2:561888/140‑1 (MQ=255) ccAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCAtgt > 1:1263858/1‑140 (MQ=255) ccAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCAtgt < 1:1162779/140‑1 (MQ=255) ccAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCAtgt > 2:1326712/1‑140 (MQ=255) ccACACTCAGGTTCGCCATATGCACTTGTTTGTCGTGCGCCACCGCCAGTTTGGCCCACAC‑TT‑TTTGCATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGgcg < 2:1265396/140‑1 (MQ=255) ccACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGgcg < 1:636413/140‑1 (MQ=255) ccACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGgcg < 1:1039824/140‑1 (MQ=255) ccACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGgcg < 2:1249517/140‑1 (MQ=255) cacacacaGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGgcgc < 2:1002318/140‑1 (MQ=255) aGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTa < 1:788493/140‑1 (MQ=255) gTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAg > 2:1363182/1‑140 (MQ=255) gTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAg < 1:1121650/140‑1 (MQ=255) gTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAg > 2:1317966/1‑140 (MQ=255) gTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAg > 2:1316105/1‑140 (MQ=255) cGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCt > 1:546579/1‑140 (MQ=255) cGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCt < 2:74258/140‑1 (MQ=255) tatGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCAc > 2:1322963/1‑140 (MQ=255) tGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCa > 2:53138/1‑140 (MQ=255) tGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCa > 2:1027965/1‑140 (MQ=255) tGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCa > 1:660630/1‑140 (MQ=255) tgtttgtCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTca > 2:726900/1‑140 (MQ=255) tgtttgtCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTca > 2:1366358/1‑140 (MQ=255) tgttggtCGTGCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTca < 2:1029305/140‑1 (MQ=255) gCACCACCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCg < 1:374757/140‑1 (MQ=255) caccacCGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGt > 1:1354715/1‑140 (MQ=255) ccGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAg < 1:867519/140‑1 (MQ=255) ccGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAg < 2:383108/140‑1 (MQ=255) ccGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAg < 1:1440503/140‑1 (MQ=255) ccGCCAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGGTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAg > 1:491870/1‑140 (MQ=255) ccGCCACTTTGGCCCAGACTTT‑TTT‑CATCGCCCGCCCAGGCTTTCTCTACCAGCGTTTTAAAGCGAGGATTAATTTCGGTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTCGCACATGCCAGCGTTCCAg > 2:1492307/1‑140 (MQ=255) ccAGTTTGGCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAgcgc > 2:467825/1‑140 (MQ=255) gCCCACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCa > 2:1032605/1‑140 (MQ=255) cccACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAt < 1:785587/140‑1 (MQ=255) cccACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAt < 2:546579/140‑1 (MQ=255) cccACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAt < 1:1326712/140‑1 (MQ=255) cccACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAt < 2:135694/140‑1 (MQ=255) cccACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAt < 2:1234319/140‑1 (MQ=255) cccACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAt < 1:604349/140‑1 (MQ=255) cccACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAt < 1:413326/140‑1 (MQ=255) cccACACTTT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAt < 2:879720/140‑1 (MQ=255) | GTGATATTCCGGGAACAGATCTTTCACCACCAGATCCGAGTGCAGCGCCGCAACACCGTTCACCGCGAAACCGCCAACCACACACAGGTTCGCCATATGCACTTGTTTGTCGTGCACCACCGCCAGTTTGGCCCACAC‑TT‑TTT‑CATCGCCCGGCCAGGTTTTCTCTACCAGCGTTTTAAAGCGAGTATTAATTTCGTTAATAATCTGCATGTGGCGCGGCAGTAAGCCTTTCACCAGTTTCACATCCCAGCGTTCCAGCGCTTCTGGCAT > NC_000913/3551160‑3551429 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |