| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,018,925 | (C)5→6 | coding (540/1128 nt) | fliK → | flagellar hook‑length control protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,018,920 | 1 | . | C | 86.8% | 219.8 / 26.8 | 68 | coding (535/1128 nt) | fliK | flagellar hook‑length control protein |
| Reads supporting (aligned to +/- strand): ref base . (3/6); new base C (30/29); total (33/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.26e-01 | |||||||||||
CCTTTTTGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑CCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGACACAGCCACTGC > NC_000913/2018784‑2019055 | ccTTTTTGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑ccc > 1:431355/1‑140 (MQ=255)ccTTTTTGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑ccc < 2:498887/140‑1 (MQ=255)ccTTTTTGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑ccc > 1:1437045/1‑140 (MQ=255) tttGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑CCCCCgg < 2:152549/140‑1 (MQ=255) ttGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑ccccccgg < 1:1465776/140‑4 (MQ=255) cGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGTCCTCTGAGCAACTCGCAACAGCACAGCCTGATGACGCCCCCCGGcac < 2:1003510/140‑1 (MQ=255) gATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGcaca < 1:28816/140‑1 (MQ=255) aTGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCacac > 2:295238/1‑140 (MQ=255) tGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑CCCCCGGCACACCAGCt < 1:479120/140‑1 (MQ=255) gCCGGGTTTTGACAATACGCCCAGAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCt < 2:1562868/140‑1 (MQ=255) gCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCt < 1:321157/140‑1 (MQ=255) gCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCt > 1:791567/1‑140 (MQ=255) gCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCt < 1:1041963/140‑1 (MQ=255) gCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCt > 1:1219384/1‑140 (MQ=255) ccGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTc > 2:1401065/1‑140 (MQ=255) ttttGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCa > 2:404528/1‑140 (MQ=255) ttGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCAtt < 2:348502/140‑1 (MQ=255) cAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAaca < 1:110115/140‑1 (MQ=255) aaTACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAacac < 1:1356919/140‑1 (MQ=255) tACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCg > 2:441138/1‑140 (MQ=255) tACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCg < 2:986095/140‑1 (MQ=255) tACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCg > 1:410969/1‑140 (MQ=255) cccAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTgg > 1:939671/1‑140 (MQ=255) ccAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGt < 1:126510/140‑1 (MQ=255) gTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAg < 1:241499/140‑1 (MQ=255) aCTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAg > 1:1273959/1‑140 (MQ=255) tGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGcc < 1:233287/140‑1 (MQ=255) tGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGcc < 1:183089/140‑1 (MQ=255) gcgcCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCaga > 2:1437999/1‑140 (MQ=255) tCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAg < 2:1219384/140‑1 (MQ=255) aCCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGGCTTCTGAGCATCTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCgg < 2:1264768/140‑1 (MQ=255) tACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGtcat > 1:484960/1‑140 (MQ=255) ccGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑CCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAg < 1:382739/140‑1 (MQ=255) ccGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑CCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAg < 2:1593488/140‑1 (MQ=255) aCAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGca < 2:1267803/140‑1 (MQ=255) cAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGcac < 1:890644/140‑1 (MQ=255) cAGAGAAACCAACGCTCATCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGcac < 2:692765/140‑1 (MQ=255) gagaAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCacac < 1:1546545/140‑1 (MQ=255) agaAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACAcc > 2:1030792/1‑140 (MQ=255) agaAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACAcc > 2:1056419/1‑140 (MQ=255) cGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCGCCGGt > 1:552555/1‑140 (MQ=255) cGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGt > 1:1256168/1‑140 (MQ=255) gCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑CCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGa < 1:15945/140‑1 (MQ=255) ttCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCg > 1:1520522/1‑140 (MQ=255) tCACAAAGCCGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGc < 2:1327462/140‑1 (MQ=255) tCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGc > 2:1108105/1‑140 (MQ=255) cacaAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCt > 2:257436/1‑140 (MQ=255) aaaCTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTgccg > 1:945373/1‑140 (MQ=255) aaCTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTgccgc < 1:295238/140‑1 (MQ=255) gACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGc < 2:1102071/140‑1 (MQ=255) aCTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGcc > 2:1225243/1‑140 (MQ=255) cTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGccc > 1:975138/1‑140 (MQ=255) cTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCt < 2:939671/140‑1 (MQ=255) aGCAACTCACAACAGCACAGCCCGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAAt < 2:484240/140‑1 (MQ=255) cTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTc < 1:1256856/140‑1 (MQ=255) cTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTc > 1:1101062/1‑140 (MQ=255) cTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTc > 1:300544/1‑140 (MQ=255) cTCACAACAGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAACAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTc > 2:773094/1‑140 (MQ=255) caacaGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCcaca < 1:1521116/140‑1 (MQ=255) aacaGCACAGCCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCacac < 1:1168587/140‑1 (MQ=255) cagcacagcCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCa < 2:431355/140‑1 (MQ=255) cagcacagcCTGATGACG‑CCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAg > 2:58290/1‑140 (MQ=255) cacagcCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGac > 2:1072495/1‑140 (MQ=255) cacagcCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGac > 1:1312145/1‑140 (MQ=255) cacagcCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGac > 1:885956/1‑140 (MQ=255) cacagcCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGac > 1:801804/1‑140 (MQ=255) cacagcCTGATGACG‑CCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGaca > 2:718499/1‑140 (MQ=255) cacagcCTGATGACG‑CCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGaca < 2:1521731/140‑1 (MQ=255) acagcCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGaca < 2:975138/140‑1 (MQ=255) agcCTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGAcaca > 1:688680/1‑140 (MQ=255) ccTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGACACAGc > 2:1468513/1‑140 (MQ=255) cTGATGACGCCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGACACAGcc < 2:1437045/140‑1 (MQ=255) tgaCG‑CCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGACACAGCCACTGc > 1:432583/1‑140 (MQ=255) | CCTTTTTGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACG‑CCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGACACAGCCACTGC > NC_000913/2018784‑2019055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |