Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,213,7780AC32.3% 167.1 / 27.6 93F116V (TTC→GTC) yjaBputative N‑acetyltransferase YjaB
Reads supporting (aligned to +/- strand):  ref base A (36/27);  new base C (0/30);  total (36/57)
Fisher's exact test for biased strand distribution p-value = 7.57e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 105 total aligned reads displayed.

CTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATATGCTG  >  NC_000913/4213639‑4213913
                                                                                                                                            |                                                                                                                                       
cTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGaa                                                                                                                                         >  1:751631/1‑140 (MQ=255)
 tAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAAc                                                                                                                                        >  1:1587454/1‑140 (MQ=255)
 tAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAAc                                                                                                                                        >  1:205103/1‑140 (MQ=255)
   aaCCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAAccc                                                                                                                                      >  1:209196/1‑140 (MQ=255)
        gAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTACCCTTAAAC‑CCCCCCTTCTTATAGAACCCAACCg                                                                                                                                 <  1:1440091/140‑1 (MQ=255)
        gAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCg                                                                                                                                 >  1:784149/1‑140 (MQ=255)
        gAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCg                                                                                                                                 >  2:1578615/1‑140 (MQ=255)
        gAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCg                                                                                                                                 >  1:487946/1‑140 (MQ=255)
        gAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCg                                                                                                                                 >  1:537639/1‑140 (MQ=255)
              cAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGCCCACCTCAGAGCGCCCCGTAACCTTAAAC‑CCCACCTTCTTATAGACCCCAACCGCCTGCt                                                                                                                           <  2:709313/140‑1 (MQ=255)
               aGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTc                                                                                                                          >  1:535201/1‑140 (MQ=255)
               aGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTc                                                                                                                          >  1:1174603/1‑140 (MQ=255)
                 cccACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCAt                                                                                                                        >  1:897539/1‑140 (MQ=255)
                  ccACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCAtt                                                                                                                       <  2:1159470/140‑1 (MQ=255)
                  ccACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCAtt                                                                                                                       >  2:447722/1‑140 (MQ=255)
                     ccGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTg                                                                                                                    <  1:633000/140‑1 (MQ=255)
                      cGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGc                                                                                                                   >  2:1110820/1‑140 (MQ=255)
                         gATGAGAAAAAACCCCCTACGCCCCCACATCCGCCAGATTCAGCAACGTAGACGGTTTCCCCAAAGCGTCCACCTCAGAGCTTCCCGTACCCTTAAAC‑CCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCa                                                                                                                <  2:898517/140‑1 (MQ=255)
                           tGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCAtt                                                                                                              >  2:1415315/1‑140 (MQ=255)
                                aaaaaTCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACgt                                                                                                         >  1:758610/1‑140 (MQ=255)
                                  aaaTCGCCTACGCCCCCACATCCGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCCCCTCAGAGCGTCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACgttg                                                                                                       <  1:518899/140‑1 (MQ=255)
                                             ccccccACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTACCCTTAAAC‑CCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTc                                                                                            <  1:223996/139‑1 (MQ=255)
                                                 ccACATCCGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAC‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGt                                                                                        <  1:1290300/140‑1 (MQ=255)
                                                         gCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCga                                                                                >  2:53063/1‑140 (MQ=255)
                                                         gCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCga                                                                                >  2:501521/1‑140 (MQ=255)
                                                         gCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGCCCACCTCAGAGCGCCCCGTACCCTTAAAC‑CCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCga                                                                                <  2:1077726/140‑1 (MQ=255)
                                                          ccAGGTACAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCTTAACCTTAAAC‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCgag                                                                               <  1:1497331/140‑1 (MQ=255)
                                                           cAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCgaga                                                                              >  2:1456333/1‑140 (MQ=255)
                                                           cAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCgaga                                                                              >  1:1459878/1‑140 (MQ=255)
                                                             gATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAgc                                                                            >  1:1206370/1‑140 (MQ=255)
                                                              aTTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAgcg                                                                           <  1:221081/140‑1 (MQ=255)
                                                              aTTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAgcg                                                                           >  2:162656/1‑140 (MQ=255)
                                                                tCAGCACCGGATACGGTTTCCCCAAATCGTCCTCCTCAGAGCGTCCCGTAACCTTAAAG‑CCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                                         <  1:386648/140‑1 (MQ=255)
                                                                tCAGCAACGGATACGTTTTCCCCAATTCGTCCACCTCAGAGCGTCCCGTAACCTTAAAC‑CCCCCCTTCTTAGAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                                         <  2:1111469/140‑1 (MQ=255)
                                                                tCAGCAACGGATACGGTTTCCCCAAATCGTCCCCCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                                         <  1:94628/140‑1 (MQ=255)
                                                                tCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                                         <  2:212555/140‑1 (MQ=255)
                                                                tCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                                         <  1:447722/140‑1 (MQ=255)
                                                                tCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                                         <  2:201904/140‑1 (MQ=255)
                                                                tCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                                         <  1:1132620/140‑1 (MQ=255)
                                                                       cGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTcca                                                                  >  1:249807/1‑140 (MQ=255)
                                                                        ggATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTccac                                                                 >  1:1145633/1‑140 (MQ=255)
                                                                         gATACGTTTTCCCCAAATCGTCCCCCTCAGGGCGCCCCG‑AACCTTAAAACCCCACTTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTccacc                                                                <  2:1518720/140‑1 (MQ=255)
                                                                            ccGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTACCCTTAAAC‑CCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGc                                                             <  2:123586/139‑1 (MQ=255)
                                                                            ccGGTTCCCCCAAATCGCCCCCCTCAGAGCGCCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGc                                                             <  2:537639/139‑1 (MQ=255)
                                                                              ggTTCCCCCAATTCGTCCACCTCAGGGCGCCCCGTACCCTTAAAC‑CCCCCCTTCTAATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCAc                                                           <  2:1587454/140‑1 (MQ=255)
                                                                                    cccAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGAcc                                                     <  1:1110820/140‑1 (MQ=255)
                                                                                      cAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTa                                                   <  2:807/140‑1 (MQ=255)
                                                                                        aaTCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTAcg                                                 >  1:302981/1‑140 (MQ=255)
                                                                                             tCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCa                                            >  2:1416117/1‑140 (MQ=255)
                                                                                                 ccTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcg                                        <  2:784149/140‑1 (MQ=255)
                                                                                                   tCAGAGTGCCCCGTAACCTTAAAC‑CCCTCCTTCTAATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  2:897539/140‑1 (MQ=255)
                                                                                                   tCAGAGCGTCCCTTAACATTAAAC‑CCCCCCTTCTTATATACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  2:703488/140‑1 (MQ=255)
                                                                                                   tCAGAGCGTCCCGTACCCTTAAAC‑CCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  2:609266/140‑1 (MQ=255)
                                                                                                   tCAGAGCGTCCCGTACCCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  1:1072387/140‑1 (MQ=255)
                                                                                                   tCAGAGCGTCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  1:847323/140‑1 (MQ=255)
                                                                                                   tCAGAGCGTCCCGTAACCTTAAAC‑CCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  1:1493184/140‑1 (MQ=255)
                                                                                                   tCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  1:1456333/140‑1 (MQ=255)
                                                                                                   tCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  1:1415315/140‑1 (MQ=255)
                                                                                                   tCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  1:162656/140‑1 (MQ=255)
                                                                                                   tCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      >  1:754616/1‑140 (MQ=255)
                                                                                                   tCAGAGCGCCCCGTACCTTTAAAC‑CCCACCTTCTTATAGAACCAAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  1:13238/140‑1 (MQ=255)
                                                                                                   ccggagCGTCCGTTAACCTTAAAC‑CCCACCTTCTTTGAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  2:1313934/137‑1 (MQ=255)
                                                                                                   ccgaagCGGCCCGTAACCTTAATA‑CCCCCTTTTTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTCCCGGTGCCATCGAGAGCGCATGCTCCCCCAGCGCCCGACCTACGCCGCAGCcgcg                                      <  2:209196/136‑1 (MQ=255)
                                                                                                   ccAGGGCGCCCCGTACCCTTAAAC‑CCCCCCTCCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  2:91700/139‑1 (MQ=255)
                                                                                                   ccAGAGCGTCCCGTACCCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTTCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  2:1173959/139‑1 (MQ=255)
                                                                                                   ccAGAGCGTCCCGTACCCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  1:1559523/139‑1 (MQ=255)
                                                                                                   ccAGAGCGTCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  2:1267792/139‑1 (MQ=255)
                                                                                                   ccAGAGCGTCCCGTAACCTTAAAA‑CCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  2:110213/139‑1 (MQ=255)
                                                                                                   ccAGAGCGCCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                                      <  1:1425046/139‑1 (MQ=255)
                                                                                                      gagCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGcac                                   <  2:1206370/140‑1 (MQ=255)
                                                                                                           tCCCGTAACCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                              <  1:912646/140‑1 (MQ=255)
                                                                                                           tCCCGTAACCTTAAAA‑CCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                              <  2:1428701/140‑1 (MQ=255)
                                                                                                           ccccGTAACCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                              <  2:487213/139‑1 (MQ=255)
                                                                                                            cccGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAgg                             >  1:1186993/1‑140 (MQ=255)
                                                                                                            cccGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAgg                             >  2:1377468/1‑140 (MQ=255)
                                                                                                            cccGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAgg                             >  1:1389358/1‑140 (MQ=255)
                                                                                                            cccGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGAAGCCGCGCACATCAgg                             >  2:306990/1‑140 (MQ=255)
                                                                                                             ccGTAACCTTAAAC‑CCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGa                            <  2:751631/140‑1 (MQ=255)
                                                                                                              cGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGAt                           >  2:304688/1‑140 (MQ=255)
                                                                                                                tAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCg                         <  2:1423908/140‑1 (MQ=255)
                                                                                                                      ttaagccccACCTTCTTAAAAAACCAAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATaaa                    <  1:1174839/134‑1 (MQ=255)
                                                                                                                      tAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCTACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAAc                   >  1:154271/1‑140 (MQ=255)
                                                                                                                      tAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAAc                   >  1:659906/1‑140 (MQ=255)
                                                                                                                          acccccccTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgc                <  2:535201/138‑1 (MQ=255)
                                                                                                                          a‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  1:243507/140‑1 (MQ=255)
                                                                                                                          a‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  2:249807/140‑1 (MQ=255)
                                                                                                                          a‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  1:82459/140‑1 (MQ=255)
                                                                                                                           gccctctttctaAAAGAACACATCCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCAACGAGAGCGCATGCTCCACCAGCACCCGACCTGCGCCGCAGCCGGGCACATCAGGATCGATAAACAgcg               <  2:1074896/133‑1 (MQ=255)
                                                                                                                           cccccctttcttAAAAACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  2:101411/133‑1 (MQ=255)
                                                                                                                           cccccccTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  1:1355334/139‑1 (MQ=255)
                                                                                                                           cccccccTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  2:237231/139‑1 (MQ=255)
                                                                                                                           cccccccTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  2:714128/139‑1 (MQ=255)
                                                                                                                           cccccccTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  2:758610/139‑1 (MQ=255)
                                                                                                                           cccccccTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  1:412403/139‑1 (MQ=255)
                                                                                                                           cccccccTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg               <  1:166613/139‑1 (MQ=255)
                                                                                                                                  ttcttATAGAACCCCACCGCCTGCTCATTTTGCTCATTCACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCat        <  2:150431/140‑1 (MQ=255)
                                                                                                                                  ttcttATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCat        <  1:53063/140‑1 (MQ=255)
                                                                                                                                  ttcttATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCat        <  1:501521/140‑1 (MQ=255)
                                                                                                                                       ataGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATAtgct   >  2:198970/1‑140 (MQ=255)
                                                                                                                                        taGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATAtgctg  <  2:205103/140‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                       
CTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAA‑CCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATATGCTG  >  NC_000913/4213639‑4213913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑