Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,430,060	T→C	E260G (GAA→GGA)	aroE ←	shikimate dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,430,060	0	T	C	100.0%	325.7 / NA	86	E260G (GAA→GGA)	aroE	shikimate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (45/41);  total (45/41)

GCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTTCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTCCTTTCTGATA  >  NC_000913/3429923‑3430196                                                                                                                                          |                                                                                                                                         gcgcATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCt                                                                                                                                        >  2:982546/1‑140 (MQ=255)    cATGTCAGTTGCCTACCATTCACGAGAGCGGGAACACATACACATTTTTTATTCTCGTCCCCCTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATATCTGGTCCTACg                                                                                                                                     <  1:1241221/140‑1 (MQ=255)    cATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACg                                                                                                                                     <  1:861720/140‑1 (MQ=255)      tGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTc                                                                                                                                   <  1:710168/140‑1 (MQ=255)       gTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCa                                                                                                                                  >  1:1503601/1‑140 (MQ=255)            ttGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAg                                                                                                                             <  2:316418/140‑1 (MQ=255)            ttGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAg                                                                                                                             <  2:1359327/140‑1 (MQ=255)              gCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCCTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGaa                                                                                                                           <  2:13395/140‑1 (MQ=255)                 tACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAacac                                                                                                                        <  1:1109320/140‑1 (MQ=255)                  aCCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACAcc                                                                                                                       >  1:453398/1‑140 (MQ=255)                   ccATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCg                                                                                                                      <  2:106074/140‑1 (MQ=255)                      ttCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGc                                                                                                                   >  1:1331441/1‑140 (MQ=255)                      ttCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGc                                                                                                                   <  1:677024/140‑1 (MQ=255)                         aCGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCag                                                                                                                >  2:1399574/1‑140 (MQ=255)                              agCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGagaag                                                                                                           >  1:218156/1‑140 (MQ=255)                                cGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAgaagaa                                                                                                         >  1:850377/1‑140 (MQ=255)                                cGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAgaagaa                                                                                                         >  2:963472/1‑140 (MQ=255)                                cGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAgaagaa                                                                                                         >  2:1450194/1‑140 (MQ=255)                                 gggAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGaaa                                                                                                        <  1:1567364/140‑1 (MQ=255)                                   gAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAgg                                                                                                      >  1:392979/1‑140 (MQ=255)                                         aTACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAg                                                                                                >  2:1528221/1‑140 (MQ=255)                                            cacaTTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAgccg                                                                                             <  1:1037721/140‑1 (MQ=255)                                               aTTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCt                                                                                          <  2:710278/140‑1 (MQ=255)                                                 tttttATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCtgt                                                                                        <  2:728918/140‑1 (MQ=255)                                                  ttttATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCtgtg                                                                                       >  1:432057/1‑140 (MQ=255)                                                   tttATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGCGCCAGAGAAGAAAGGCATGAGCCGCCTGTGc                                                                                      >  2:388239/1‑140 (MQ=255)                                                     tATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGcca                                                                                    >  2:1260721/1‑140 (MQ=255)                                                         ctcGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAg                                                                                <  2:406801/140‑1 (MQ=255)                                                         ctcGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAg                                                                                <  2:1344106/140‑1 (MQ=255)                                                         ctcGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAg                                                                                <  1:375216/140‑1 (MQ=255)                                                          tcGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGc                                                                               <  2:830613/140‑1 (MQ=255)                                                           cGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCa                                                                              >  1:266400/1‑140 (MQ=255)                                                                  ctctTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTaa                                                                       >  1:1030483/1‑140 (MQ=255)                                                                  ctctTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTaa                                                                       >  2:74714/1‑140 (MQ=255)                                                                  ctctTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTaa                                                                       >  1:1142526/1‑140 (MQ=255)                                                                    ctTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAAc                                                                     >  1:224559/1‑140 (MQ=255)                                                                       cccTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCAt                                                                  >  1:314327/1‑140 (MQ=255)                                                                       cccTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCAt                                                                  <  2:1394492/140‑1 (MQ=255)                                                                       cccTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCAt                                                                  >  1:953210/1‑140 (MQ=255)                                                                         cTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCa                                                                <  1:158767/140‑1 (MQ=255)                                                                          tGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAg                                                               >  1:332152/1‑140 (MQ=255)                                                                          tGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAg                                                               >  1:956385/1‑140 (MQ=255)                                                                            tCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCa                                                             >  2:1257251/1‑140 (MQ=255)                                                                            tCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCa                                                             >  2:1331486/1‑140 (MQ=255)                                                                             ccGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCAt                                                            >  1:856071/1‑140 (MQ=255)                                                                             ccGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCAt                                                            >  1:1224952/1‑140 (MQ=255)                                                                                 aaaCTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACg                                                        >  2:1456604/1‑140 (MQ=255)                                                                                   aCTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCt                                                      >  1:801305/1‑140 (MQ=255)                                                                                            ccTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTc                                             >  2:1328865/1‑140 (MQ=255)                                                                                            ccTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTc                                             <  1:982546/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAGCCATCAGCATTACGCTTTGAGCCTCg                                            <  2:1542251/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  2:1331441/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  2:1574650/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  2:1135288/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  1:1053409/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  1:1293008/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  1:272967/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  2:456829/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  2:432057/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  1:719724/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  1:992638/140‑1 (MQ=255)                                                                                             cTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCg                                            <  2:1179736/140‑1 (MQ=255)                                                                                                 ttCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCgctgc                                        >  1:1001716/1‑140 (MQ=255)                                                                                                     cgcgGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTcac                                    >  2:673954/1‑140 (MQ=255)                                                                                                      gcgGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTcaca                                   >  1:798770/1‑140 (MQ=255)                                                                                                      gcgGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTcaca                                   <  1:289749/140‑1 (MQ=255)                                                                                                      gcgGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTcaca                                   >  2:851902/1‑140 (MQ=255)                                                                                                       cgGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCacac                                  <  1:42046/140‑1 (MQ=255)                                                                                                       cgGACAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCacac                                  <  1:1243601/140‑1 (MQ=255)                                                                                                          aCAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCAt                               >  1:936832/1‑140 (MQ=255)                                                                                                          aCAATTCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCAt                               >  1:634336/1‑140 (MQ=255)                                                                                                              ttCCTCCTGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCa                           >  2:432800/1‑140 (MQ=255)                                                                                                                   cctGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGaaaa                      <  1:924831/140‑1 (MQ=255)                                                                                                                    ctGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAg                     >  1:1012891/1‑140 (MQ=255)                                                                                                                    ctGCAATTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAg                     >  2:456917/1‑140 (MQ=255)                                                                                                                        aaTTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGt                 >  1:387853/1‑140 (MQ=255)                                                                                                                        aaTTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGt                 >  2:381122/1‑140 (MQ=255)                                                                                                                         aTTGCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGtt                >  1:1360074/1‑140 (MQ=255)                                                                                                                            gCTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGttttt             >  1:959225/1‑140 (MQ=255)                                                                                                                             cTTTATAACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTc            >  1:15816/1‑140 (MQ=255)                                                                                                                                  taACTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCAGTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTCCTTTc       <  1:388239/140‑1 (MQ=255)                                                                                                                                     cTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTCCTTTCTGa    <  2:1285763/140‑1 (MQ=255)                                                                                                                                     cTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTCCTTTCTGa    <  1:1450194/140‑1 (MQ=255)                                                                                                                                     cTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTCCTTTCTGa    <  1:1385426/140‑1 (MQ=255)                                                                                                                                     cTGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTCCTTTCTGa    <  1:1328865/140‑1 (MQ=255)                                                                                                                                      tGGTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTCCTTTCTGAt   <  1:1528221/140‑1 (MQ=255)                                                                                                                                       ggTCCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTCCTTTCTGATa  >  2:929187/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                                         GCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGCAATTGCTTTATAACTGGTTCTACGTCAGGCAGAACACCGTGCCAGAGAAGAAAGGCATGAGCCGCCTGTGCCACCAGCATTCCTAAACCATCAGCATTACGCTTTGAGCCTCGCTGCTCACACCATGCCAGAAAAGGAGTTTTTCCTTTCTGATA  >  NC_000913/3429923‑3430196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑