BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	452,412	T→C	A378A (GCA→GCG)	ampG ←	muropeptide:H(+) symporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	452,412	0	T	C	100.0%	285.3 / NA	79	A378A (GCA→GCG)	ampG	muropeptide:H(+) symporter
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (62/17); total (62/17)

Only 100 of 107 total aligned reads displayed.

GCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGTGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGCTGATGT  >  NC_000913/452278‑452546

 ccGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTTTATTCAAGCGTCTGGCGGC‑AAACCGGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTca                                                                                                                                  >  1:1157479/1‑140 (MQ=255)

 ccGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTca                                                                                                                                  >  2:492986/1‑140 (MQ=255)

 ccGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTca                                                                                                                                  >  2:230667/1‑140 (MQ=255)

 ccGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTca                                                                                                                                  >  1:725375/1‑140 (MQ=255)

  cGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTcaa                                                                                                                                 <  2:1034756/140‑1 (MQ=255)

      tatGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACaaa                                                                                                                             >  1:170127/1‑140 (MQ=255)

         gCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAaccca                                                                                                                          <  2:1374238/140‑1 (MQ=255)

          cGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAaaccaa                                                                                                                         >  1:1453127/1‑140 (MQ=255)

               cGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGTCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGc                                                                                                                    >  1:1082886/1‑140 (MQ=255)

               cGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGc                                                                                                                    >  1:777197/1‑140 (MQ=255)

               cGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGc                                                                                                                    >  1:310730/1‑140 (MQ=255)

                  gagaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCAc                                                                                                                 >  2:1125113/1‑140 (MQ=255)

                   agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACg                                                                                                                >  1:1192761/1‑140 (MQ=255)

                     aTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACggg                                                                                                              >  2:789818/1‑140 (MQ=255)

                       aaaGTTGTCTTTTACTCGTGTATTTTCAAGCGTCTGGGGGC‑AACCCAGCAGCAAAATAGGCCCTGGTCCGGC‑AGCGGCGGCGGAGAATAGATAGAATGTCGCCCAGCCGTGCGTTTCAACAAACCAACCCGCCACGGGGc                                                                                                            <  2:803700/140‑1 (MQ=255)

                       aaaGTTGTCATTTCCTCGTGTATATCCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGCCGCCCAGCCGTGCGCTTCAACAACCCAACCCGCCACGGGGc                                                                                                            <  2:86645/140‑1 (MQ=255)

                       aaaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGc                                                                                                            >  2:1398261/1‑140 (MQ=255)

                       aaaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGc                                                                                                            >  2:162538/1‑140 (MQ=255)

                       aaaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGc                                                                                                            >  1:52698/1‑140 (MQ=255)

                       aaaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGc                                                                                                            >  2:39242/1‑140 (MQ=255)

                        aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTCCGGC‑GGCGGCGACGGAGAATAGATAGAATGTCCCCCAGCCGTGCGCTTCAACAACCCACCCCGCCACGGGGcc                                                                                                           <  2:1494527/140‑1 (MQ=255)

                             gTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACAt                                                                                                      >  2:1435102/1‑140 (MQ=255)

                                aTTTCCTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGAAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATaaa                                                                                                   <  2:826575/140‑1 (MQ=255)

                                  ttACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCACCCCGCCACGGGGCCGACATAAACt                                                                                                 <  2:387279/140‑1 (MQ=255)

                                  ttACTCGTGTATATTCAAGCGTCTGGCGGA‑AACCCAGCAGAAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAACCCACCCCGCCACGGGGCCGACATAAACt                                                                                                 <  2:1578957/140‑1 (MQ=255)

                                    aCTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCg                                                                                               >  2:783352/1‑140 (MQ=255)

                                      tCGTGTATATTCAAGCGTCTGGGGGC‑AAACCAGCAGAAAAAAAACCCCTGGTACGGC‑AGCGGCGCCGAAGAATAGATAGAATGTCGACCAGCCGTGCGTTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGcc                                                                                             <  2:618312/140‑1 (MQ=255)

                                      ccgggtAAATTCAAGCGTC‑GGCGGCGAAACAAGCGGAAAAAAAACCCCTGGCCCGGC‑GCCGGGGCCGGAGAAAAGATGGAATTTCGCCCCGCCGTGCGCTTAAACAAACCAGCCCGCCACGGGGCCGACATAAACTCGcc                                                                                             <  2:1068662/136‑1 (MQ=255)

                                        gtgtATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCt                                                                                           >  2:541072/1‑140 (MQ=255)

                                        gtgtATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCt                                                                                           >  2:202051/1‑140 (MQ=255)

                                        gtgtATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCt                                                                                           >  1:804425/1‑140 (MQ=255)

                                         tgttttttCAGGCGTCTGGCGGA‑AAACCAGCAGCAAAATAAGCCCTGGTCCGGC‑AGCGGCCACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTa                                                                                          <  2:725375/134‑1 (MQ=255)

                                            atatTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTAcag                                                                                       >  1:181100/1‑140 (MQ=255)

                                               ttCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTAcagcag                                                                                    >  1:752702/1‑140 (MQ=255)

                                                tCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAACCCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGa                                                                                   <  1:1309262/140‑1 (MQ=255)

                                                tCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGa                                                                                   >  2:807244/1‑140 (MQ=255)

                                                  aaGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGaaa                                                                                 >  2:649146/1‑140 (MQ=255)

                                                  aaGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGaaa                                                                                 >  1:752714/1‑140 (MQ=255)

                                                   aGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAg                                                                                >  2:71532/1‑140 (MQ=255)

                                                    gCGTCTGGCGGC‑AAGCCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAgc                                                                               >  2:1507088/1‑140 (MQ=255)

                                                    gCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAgc                                                                               >  2:1181215/1‑140 (MQ=255)

                                                    gCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAgc                                                                               >  2:111401/1‑140 (MQ=255)

                                                    gCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAgc                                                                               >  1:914337/1‑140 (MQ=255)

                                                    gCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAgc                                                                               >  2:1447393/1‑140 (MQ=255)

                                                    gCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAgc                                                                               >  1:268151/1‑140 (MQ=255)

                                                       tggggcggc‑AACCCAGCAGAAAAATGAG‑CCTGGTCCCGCGGGCGGTAGCGGAGAATAGATAGAATGCCGACCGGCCGGGCGATTCAACAACCCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCt                                                                            <  2:411438/137‑1 (MQ=255)

                                                       tccggcgcc‑AACCCAGCAGCAAAATAAGCCCGGGTGCGGC‑GGCGGCGACGGAGAAGAGATAAAATCTCGACCAGCCGTGCGCTCCACCAACCCACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCt                                                                            <  2:777197/137‑1 (MQ=255)

                                                       tCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCt                                                                            >  2:689406/1‑140 (MQ=255)

                                                       tCTGGCGGA‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGCCCAGCCGTGCGCTTCAACAAACCACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCt                                                                            <  1:682262/140‑1 (MQ=255)

                                                         tGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTga                                                                          >  2:780315/1‑140 (MQ=255)

                                                                 aaaCCAGCAGCAAAATAAGCCCTGGTAGGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGCCCAGCCGTGCGCTTCAACAACCCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAgg                                                                   <  2:549074/140‑1 (MQ=255)

                                                                 aaaCCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAgg                                                                   <  1:1435102/140‑1 (MQ=255)

                                                                 aaaCCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAgg                                                                   <  1:1407856/140‑1 (MQ=255)

                                                                 aaaCAAGCAGAAAAATAAGCCCTGGTACGGC‑AGGGGGGACGAAGAATAAATAGAATGTCGCCCAGCCGTGCTCTCCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAgg                                                                   <  2:1082886/140‑1 (MQ=255)

                                                                          gcaAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGa                                                          >  1:333168/1‑140 (MQ=255)

                                                                                     ccTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGaaaa                                               <  2:1192761/140‑1 (MQ=255)

                                                                                     ccTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGaaaa                                               <  2:804425/140‑1 (MQ=255)

                                                                                       tGGTCCGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGCCCAGCCGTGCGCTTCAACAAACCACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATg                                             <  1:276974/140‑1 (MQ=255)

                                                                                       tGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAACCCACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATg                                             <  2:729135/140‑1 (MQ=255)

                                                                                       tGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATg                                             <  1:162538/140‑1 (MQ=255)

                                                                                       gggtagtgC‑AGCGGCGACGGAGAATAGATAGAATGTCGCCCAGCCGTGCGCTTCTACAAACCACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATg                                             <  2:1157479/133‑1 (MQ=255)

                                                                                       gggTACGGT‑AGCGGCGACGGAGAATAGATAGAATGCCGCCCAGCCGTGCGCTTCAACAACCCACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATg                                             <  2:838243/139‑1 (MQ=255)

                                                                                       gggTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGCCCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATg                                             <  2:1241500/139‑1 (MQ=255)

                                                                                        ggTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGa                                            >  1:1391868/1‑140 (MQ=255)

                                                                                        ggTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGa                                            >  1:17323/1‑140 (MQ=255)

                                                                                         gTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGAc                                           <  2:333168/140‑1 (MQ=255)

                                                                                            cGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGCCCAGCCGTGCGCTTCAACAAACCACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACtta                                        <  2:678015/140‑1 (MQ=255)

                                                                                            cGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACtta                                        <  1:649146/140‑1 (MQ=255)

                                                                                            cGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACtta                                        <  1:1181215/140‑1 (MQ=255)

                                                                                            cGGC‑AGCGGCGACGGAGAATAATTAAAATGTCGTCCGGCGGTGCCTTTCAACAAACAACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACtta                                        <  1:492986/140‑1 (MQ=255)

                                                                                              gC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCG‑CCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACttatta                                     >  2:1046771/1‑140 (MQ=255)

                                                                                               c‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACttatta                                     >  1:354091/1‑140 (MQ=255)

                                                                                                  gcggcgACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACa                                   >  1:36672/1‑140 (MQ=255)

                                                                                                  gcggcgACGGAGAATAGATAGAATGCCGCCCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACa                                   <  1:854697/140‑1 (MQ=255)

                                                                                                   cggcgACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACAt                                  >  2:433521/1‑140 (MQ=255)

                                                                                                    ggcgACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGGAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATa                                 >  1:1273794/1‑140 (MQ=255)

                                                                                                    ggcgACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATa                                 <  2:752714/140‑1 (MQ=255)

                                                                                                    ggcgACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATa                                 <  2:310730/140‑1 (MQ=255)

                                                                                                    ggcgACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATa                                 <  1:1104819/140‑1 (MQ=255)

                                                                                                    ggcgACGGAGAATAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATa                                 <  1:689406/140‑1 (MQ=255)

                                                                                                              aaTAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTaa                       >  2:577142/1‑140 (MQ=255)

                                                                                                              aaTAGATAGAATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTaa                       <  1:783352/140‑1 (MQ=255)

                                                                                                                    tagaATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAgcgc                 >  1:1161033/1‑140 (MQ=255)

                                                                                                                    tagaATGCGGCCCAGCCGTGCGGTTCAAAAAACCACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAgcgc                 <  2:1024089/140‑1 (MQ=255)

                                                                                                                     agaATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGcgcg                >  2:1302229/1‑140 (MQ=255)

                                                                                                                     aaaaTTTCGCCCAGCCGTCCGACTCAATAAACAGTCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGcgcg                <  1:789818/138‑1 (MQ=255)

                                                                                                                      gaATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATACACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGa               >  1:938412/1‑140 (MQ=255)

                                                                                                                      gaATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGa               >  1:114474/1‑140 (MQ=255)

                                                                                                                      gaATGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGa               >  1:608703/1‑140 (MQ=255)

                                                                                                                        aTGTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACa             >  1:1431371/1‑140 (MQ=255)

                                                                                                                          gTCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACaaa           >  1:1136223/1‑140 (MQ=255)

                                                                                                                           tCGACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAg          >  1:1050268/1‑140 (MQ=255)

                                                                                                                             gACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGc        >  1:643647/1‑140 (MQ=255)

                                                                                                                             gACCAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGc        >  1:1523844/1‑140 (MQ=255)

                                                                                                                                cAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGCTGa     <  2:1391868/140‑1 (MQ=255)

                                                                                                                                cAGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGCTGa     <  1:96933/140‑1 (MQ=255)

                                                                                                                                 cgCCGTGCGCTTCAACAAACCACCCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGCTGAt    <  2:1406096/139‑1 (MQ=255)

                                                                                                                                 aGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGCTGAt    >  2:1326717/1‑140 (MQ=255)

                                                                                                                                 aGCCGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGCTGAt    >  2:1142372/1‑140 (MQ=255)

                                                                                                                                   ccGTGCGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGCTGAtgt  >  2:1350132/1‑140 (MQ=255)

GCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGC‑AAACCAGCAGCAAAATAAGCCCTGGTACGGC‑AGCGGCGACGGAGAATAGATAGAATGTCGACCAGCCGTGTGCTTCAACAAACCAACCCGCCACGGGGCCGACATAAACTCGCCCTACAGCAGAAAGCGCTGAGAGCAGGGCAAATTGAGTAGCGGAAAATGACTTATTACATAGCGTCATTAACAGCGCGACAAAGGCTGATGT  >  NC_000913/452278‑452546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`