BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,529,195	A→G	V350A (GTC→GCC)	sgcC ←	putative PTS enzyme IIC component SgcC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,529,195	0	A	G	100.0%	414.7 / NA	111	V350A (GTC→GCC)	sgcC	putative PTS enzyme IIC component SgcC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (46/65); total (46/65)

Only 100 of 113 total aligned reads displayed.

CAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTATCAGTAGCAGACCGAC  >  NC_000913/4529059‑4529331

cAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCa                                                                                                                                       <  1:60811/140‑1 (MQ=255)

  aCGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAgg                                                                                                                                     >  1:651215/1‑140 (MQ=255)

   cGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGt                                                                                                                                    >  1:108565/1‑140 (MQ=255)

     ctaaaaTTAGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGtct                                                                                                                                  <  2:104879/135‑1 (MQ=255)

     cTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGtct                                                                                                                                  <  2:261633/140‑1 (MQ=255)

       gagaTTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTcc                                                                                                                                >  2:302958/1‑140 (MQ=255)

       gagaTTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTcc                                                                                                                                >  2:856537/1‑140 (MQ=255)

        agaTTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCcg                                                                                                                               >  1:1544168/1‑140 (MQ=255)

          aTTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCcgcg                                                                                                                             <  1:856537/140‑1 (MQ=255)

           tttGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCgg                                                                                                                            >  1:808342/1‑140 (MQ=255)

           tttGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCgg                                                                                                                            >  2:126830/1‑140 (MQ=255)

             tGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTg                                                                                                                          >  1:259791/1‑140 (MQ=255)

               cgcACTTTCACCGGCAAACCTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGa                                                                                                                        <  1:1216898/140‑1 (MQ=255)

               cgcACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGa                                                                                                                        <  1:126383/140‑1 (MQ=255)

               cgcACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGa                                                                                                                        <  1:1208770/140‑1 (MQ=255)

                gctcTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGAt                                                                                                                       <  2:427167/137‑1 (MQ=255)

                gcACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGAt                                                                                                                       <  2:890960/140‑1 (MQ=255)

                  aCTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATaa                                                                                                                     >  1:1491748/1‑140 (MQ=255)

                   cTTTCACCGGCAAAACTGAACCCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAAc                                                                                                                    <  2:1239858/140‑1 (MQ=255)

                   cTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAAc                                                                                                                    <  1:1010331/140‑1 (MQ=255)

                   cTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAAc                                                                                                                    <  2:840579/140‑1 (MQ=255)

                   cTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAAc                                                                                                                    <  1:1238180/140‑1 (MQ=255)

                     ttCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGTGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCg                                                                                                                  <  1:460220/140‑1 (MQ=255)

                     ttCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCg                                                                                                                  <  2:1190132/140‑1 (MQ=255)

                     ttCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCg                                                                                                                  <  1:1516066/140‑1 (MQ=255)

                        aCCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAg                                                                                                               <  2:388677/140‑1 (MQ=255)

                          cGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGcc                                                                                                             <  2:211084/140‑1 (MQ=255)

                           ggCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCa                                                                                                            <  1:1519787/140‑1 (MQ=255)

                           ggCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGCCCTGGCCAGGTCTCCGCGGTAGATAACCGTAGCCa                                                                                                            <  1:1289956/140‑1 (MQ=255)

                              aaaaCTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATAc                                                                                                         <  2:1481778/140‑1 (MQ=255)

                              aaaaCTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATAc                                                                                                         >  2:1344495/1‑140 (MQ=255)

                                aaCTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAg                                                                                                       >  1:881649/1‑140 (MQ=255)

                                      aaCCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAg                                                                                                 >  1:1361078/1‑140 (MQ=255)

                                           ccTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACgg                                                                                            >  2:107712/1‑140 (MQ=255)

                                           ccTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACgg                                                                                            >  2:801430/1‑140 (MQ=255)

                                             tttGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTg                                                                                          <  2:1508111/140‑1 (MQ=255)

                                                    gcCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCgg                                                                                   <  2:259791/140‑1 (MQ=255)

                                                    gcCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCgg                                                                                   <  2:651215/140‑1 (MQ=255)

                                                     ccATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGc                                                                                  <  1:1333082/140‑1 (MQ=255)

                                                     ccATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGc                                                                                  <  1:1096041/140‑1 (MQ=255)

                                                       aTTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAg                                                                                <  1:126830/140‑1 (MQ=255)

                                                        tttCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAgg                                                                               >  1:1483714/1‑140 (MQ=255)

                                                         ttCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGt                                                                              <  2:1491748/140‑1 (MQ=255)

                                                              tGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAGCCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCg                                                                         <  1:821781/140‑1 (MQ=255)

                                                              tGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCtacg                                                                         <  1:1413565/140‑4 (MQ=255)

                                                              tGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCg                                                                         <  2:24768/140‑1 (MQ=255)

                                                                aaGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAg                                                                       >  2:303406/1‑140 (MQ=255)

                                                                aaGTAAGGCACGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAg                                                                       <  2:1439695/140‑1 (MQ=255)

                                                                 aGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAgg                                                                      <  1:1366201/140‑1 (MQ=255)

                                                                   tAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAgggg                                                                    >  1:1275447/1‑140 (MQ=255)

                                                                   tAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAgggg                                                                    <  2:738915/140‑1 (MQ=255)

                                                                   tAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAgggg                                                                    >  2:1007025/1‑140 (MQ=255)

                                                                   tAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAgggg                                                                    <  2:808342/140‑1 (MQ=255)

                                                                   tAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAgggg                                                                    <  2:1522811/140‑1 (MQ=255)

                                                                          cgAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTTTGCGAGGGGTAACACt                                                             >  1:381340/1‑140 (MQ=255)

                                                                          cgAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACt                                                             >  2:977954/1‑140 (MQ=255)

                                                                          cgAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGGCTGCGAGGGGGAACACt                                                             >  1:154203/1‑140 (MQ=255)

                                                                             aCTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTttg                                                          <  2:1141991/140‑1 (MQ=255)

                                                                               tGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTttgtt                                                        <  2:547136/140‑1 (MQ=255)

                                                                               tGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTttgtt                                                        <  2:811835/140‑1 (MQ=255)

                                                                                  gTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGcc                                                     <  1:1250506/140‑1 (MQ=255)

                                                                                       gATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTa                                                <  1:166303/140‑1 (MQ=255)

                                                                                        aTCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGGAACACTTTGTTGCCCGGTaa                                               >  1:211857/1‑140 (MQ=255)

                                                                                           agcagGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAAt                                            >  1:117923/1‑140 (MQ=255)

                                                                                           agcagGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAAt                                            >  1:216474/1‑140 (MQ=255)

                                                                                           agcagGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAAt                                            >  2:631717/1‑140 (MQ=255)

                                                                                           agcagGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAAAACGTTGTTGCCCGGGaaaaa                                            >  2:981795/1‑139 (MQ=255)

                                                                                           agcagGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGGAACACTTTGTTGCCCGGTaaaaa                                            >  1:171967/1‑139 (MQ=255)

                                                                                            gcagGACGGTAATCATCACGATGTCCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATg                                           <  1:677179/140‑1 (MQ=255)

                                                                                                 aCGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGc                                      <  1:585165/140‑1 (MQ=255)

                                                                                                  cGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGcc                                     >  1:1123023/1‑140 (MQ=255)

                                                                                                  cGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGcc                                     <  2:700404/140‑1 (MQ=255)

                                                                                                    gTAATCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAg                                   <  1:470601/140‑1 (MQ=255)

                                                                                                     tAATCATCACGATGACCTCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCCGCGAGGGGTAACAATATGTTGCCCGGTAAAACTCTGGCCAGa                                  >  1:1425752/1‑140 (MQ=255)

                                                                                                      aaTCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACTCTTTGTTGCCCGGTAAAATGCTGGCCAGaa                                 <  1:1330124/140‑1 (MQ=255)

                                                                                                      aaTCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGaa                                 <  1:107712/140‑1 (MQ=255)

                                                                                                      aaTCATCACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGaa                                 <  2:211857/140‑1 (MQ=255)

                                                                                                       atcatcACGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGGAACACCTTGTTGCCCGGTAAAATGCTGGCCAGAAt                                >  1:141615/1‑140 (MQ=255)

                                                                                                            caCGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGGCTGCGAGGGGGAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACa                           >  2:659159/1‑140 (MQ=255)

                                                                                                            caCGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGCGCTACCGGCAGGTCCGCCAGGGGCAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTTACa                           >  1:1523251/1‑140 (MQ=255)

                                                                                                            caCGATGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGAATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACa                           >  1:1323427/1‑140 (MQ=255)

                                                                                                                 tGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATg                      >  2:1431280/1‑140 (MQ=255)

                                                                                                                 tGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATg                      >  1:1340018/1‑140 (MQ=255)

                                                                                                                 tGACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATg                      <  2:294370/140‑1 (MQ=255)

                                                                                                                  gACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATgg                     <  1:570978/140‑1 (MQ=255)

                                                                                                                  gACCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATgg                     <  1:613343/140‑1 (MQ=255)

                                                                                                                   aCCCCGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATggg                    >  1:52443/1‑140 (MQ=255)

                                                                                                                    ccccGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGt                   <  1:977681/140‑1 (MQ=255)

                                                                                                                    ccccGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGt                   <  1:801430/140‑1 (MQ=255)

                                                                                                                      ccGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTTGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTAt                 <  2:881649/140‑1 (MQ=255)

                                                                                                                      ccGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTTCCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTAt                 <  2:348517/140‑1 (MQ=255)

                                                                                                                      ccGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTAt                 <  2:197661/140‑1 (MQ=255)

                                                                                                                       cGCTTATCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGGAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGGATc                >  1:1417457/1‑140 (MQ=255)

                                                                                                                             tCAACGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGGAACACTTTGTTGCCCGGGAAAATGCTGGCCAGAATTAACAAAATGGGGATCAGTAGc          >  2:900076/1‑140 (MQ=255)

                                                                                                                                 cGTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTATCAGTAGCAGAc      <  1:631717/140‑1 (MQ=255)

                                                                                                                                  gTCCTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTATCAGTAGCAGAcc     <  1:977954/140‑1 (MQ=255)

                                                                                                                                    ccTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACTCTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTATCAGTAGCAGACCGa   <  2:1483714/140‑1 (MQ=255)

                                                                                                                                    ccTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGGAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTATCAGTAGCAGACCGa   >  2:1141916/1‑140 (MQ=255)

                                                                                                                                    ccTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGGCTGCGAGGGGGAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGGATCAGTAGCAGACCGa   >  2:499549/1‑140 (MQ=255)

                                                                                                                                     cTGGCCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTATCAGTAGCAGACCGAc  <  2:381340/140‑1 (MQ=255)

CAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTAAAATGCTGGCCAGAATTAACATAATGGGTATCAGTAGCAGACCGAC  >  NC_000913/4529059‑4529331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`