Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	40,150	A→G	R79R (CGT→CGC)	caiA ←	crotonobetainyl‑CoA reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	40,150	0	A	G	100.0%	346.6 / NA	93	R79R (CGT→CGC)	caiA	crotonobetainyl‑CoA reductase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (32/61);  total (32/61)

AATCGCTGAGTTCCACATCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGACGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTCCGGGTAGACGCTGTCA  >  NC_000913/40015‑40285                                                                                                                                        |                                                                                                                                        aaTCGCTGAGTTCCACATCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTc                                                                                                                                     <  2:306900/140‑1 (MQ=255) aaTCGCTGAGTTCCACATCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTc                                                                                                                                     <  1:632711/140‑1 (MQ=255)    cGCTGAGTTCCACATCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCa                                                                                                                                  <  1:982240/140‑1 (MQ=255)     gCTGAGTTCCACATCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAg                                                                                                                                 >  2:235139/1‑140 (MQ=255)      cTGAGTTCCACATCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGc                                                                                                                                <  2:322960/140‑1 (MQ=255)       tGAGTTCCACATCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCt                                                                                                                               <  2:1416886/140‑1 (MQ=255)              cacaTCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGCGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCtccatcca                                                                                                                        >  2:1286327/1‑140 (MQ=255)               acaTCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCcac                                                                                                                       <  1:150977/140‑1 (MQ=255)                  tCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACAcg                                                                                                                    <  1:939912/140‑1 (MQ=255)                     gCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACAcggcg                                                                                                                 >  1:1293126/1‑140 (MQ=255)                     gCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACAcggcg                                                                                                                 <  1:643173/140‑1 (MQ=255)                     gCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACAcggcg                                                                                                                 >  1:1418338/1‑140 (MQ=255)                     gCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACAcggcg                                                                                                                 >  1:983374/1‑140 (MQ=255)                     gCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACAcggcg                                                                                                                 >  1:172886/1‑140 (MQ=255)                      cTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACAcggcgg                                                                                                                >  2:124731/1‑140 (MQ=255)                      cTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACAcggcgg                                                                                                                >  1:1016897/1‑140 (MQ=255)                       ttACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACggcggc                                                                                                               <  2:1225550/140‑1 (MQ=255)                         aCCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCga                                                                                                             <  1:934513/140‑1 (MQ=255)                         aCCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCga                                                                                                             <  1:680655/140‑1 (MQ=255)                          ccGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCgag                                                                                                            <  2:1212792/140‑1 (MQ=255)                             gTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGt                                                                                                         >  2:288531/1‑140 (MQ=255)                                ccGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAAc                                                                                                      >  1:951769/1‑140 (MQ=255)                                 cgcgGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACa                                                                                                     >  1:1324241/1‑140 (MQ=255)                                  gcgGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACaa                                                                                                    <  2:919202/140‑1 (MQ=255)                                   cgGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACaaa                                                                                                   >  1:1087062/1‑140 (MQ=255)                                       aaGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCGGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAAcccc                                                                                               <  2:776844/140‑1 (MQ=255)                                       aaGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAAcccc                                                                                               <  1:6953/140‑1 (MQ=255)                                       aaGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAAcccc                                                                                               <  1:202585/140‑1 (MQ=255)                                       aaGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAAcccc                                                                                               <  2:541281/140‑1 (MQ=255)                                        aGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCcg                                                                                              >  1:1538982/1‑140 (MQ=255)                                           cATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGt                                                                                           <  1:613410/140‑1 (MQ=255)                                              aaTTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCa                                                                                        <  2:439581/140‑1 (MQ=255)                                                ttttGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGa                                                                                      <  1:1538449/140‑1 (MQ=255)                                                   tGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGacca                                                                                   <  2:493044/140‑1 (MQ=255)                                                    gTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGaccac                                                                                  >  1:1118097/1‑140 (MQ=255)                                                    gTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGGGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGaccac                                                                                  >  1:865867/1‑140 (MQ=255)                                                       gATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGt                                                                               >  2:1467983/1‑140 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  1:340876/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  1:1372705/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  2:1293126/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  2:835033/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  1:200050/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  2:1418338/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  2:1114574/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  2:144920/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  1:1132092/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  2:614512/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  1:421748/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  1:1286327/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  1:1288630/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  1:838439/140‑1 (MQ=255)                                                        aTCTGCTCTTGTGTACCTCCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCAGCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTg                                                                              <  2:741049/140‑1 (MQ=255)                                                         tCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGc                                                                             <  2:456993/140‑1 (MQ=255)                                                          cTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGct                                                                            <  2:983374/140‑1 (MQ=255)                                                          cTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGcc                                                                            >  2:999077/1‑139 (MQ=255)                                                             ctctTGCGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCtt                                                                         <  2:1158650/140‑1 (MQ=255)                                                               ctTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCa                                                                       <  2:690350/140‑1 (MQ=255)                                                               ctTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCa                                                                       <  1:698472/140‑1 (MQ=255)                                                                  gtgtgCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAggg                                                                    <  2:251426/140‑1 (MQ=255)                                                                    gtgCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGAt                                                                  <  2:1016897/140‑1 (MQ=255)                                                                    gtgCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGAt                                                                  <  2:469848/140‑1 (MQ=255)                                                                    gtgCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGAt                                                                  <  2:21687/140‑1 (MQ=255)                                                                       ccTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATcag                                                               >  2:412238/1‑140 (MQ=255)                                                                       ccTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATcag                                                               >  1:784941/1‑140 (MQ=255)                                                                           cgcgCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGTGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGa                                                           <  2:1239120/140‑1 (MQ=255)                                                                           cgcgCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGa                                                           <  2:842151/140‑1 (MQ=255)                                                                           cgcgCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGa                                                           <  2:951769/140‑1 (MQ=255)                                                                           cgcgCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGa                                                           <  2:172886/140‑1 (MQ=255)                                                                                 ggAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCg                                                     <  2:1087062/140‑1 (MQ=255)                                                                                  gAAGGTGTTGAACCCGCCCGGCAACTGGTTCAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCATACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGa                                                    <  2:1324241/140‑1 (MQ=255)                                                                                   aaGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGAt                                                   <  2:80412/140‑1 (MQ=255)                                                                                     ggTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATAc                                                 <  1:107553/140‑1 (MQ=255)                                                                                          tGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCTTCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCata                                            <  1:816517/140‑1 (MQ=255)                                                                                          tGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCCCCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCata                                            <  1:808214/140‑1 (MQ=255)                                                                                          tGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCata                                            <  2:496914/140‑1 (MQ=255)                                                                                          tGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCata                                            >  2:808234/1‑140 (MQ=255)                                                                                             aCCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATcc                                         >  2:445412/1‑140 (MQ=255)                                                                                             aCCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATcc                                         >  2:39057/1‑140 (MQ=255)                                                                                                 gcccgGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCa                                     >  1:746621/1‑140 (MQ=255)                                                                                                 gcccgGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCa                                     >  1:850863/1‑140 (MQ=255)                                                                                                 gcccgGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCa                                     >  1:1385814/1‑140 (MQ=255)                                                                                                 gcccgGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCa                                     >  2:907572/1‑140 (MQ=255)                                                                                                                  gCACATAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGt                    <  1:76703/140‑1 (MQ=255)                                                                                                                   cacaTAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGtt                   <  2:1559603/140‑1 (MQ=255)                                                                                                                   cacaTAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGtt                   <  1:1467983/140‑1 (MQ=255)                                                                                                                    acaTAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTc                  <  2:1538982/140‑1 (MQ=255)                                                                                                                    acaTAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTc                  <  2:237016/140‑1 (MQ=255)                                                                                                                     caTAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTcc                 >  2:914199/1‑140 (MQ=255)                                                                                                                      aTAGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTCCg                >  1:106830/1‑140 (MQ=255)                                                                                                                        aGGTTGGTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTCCggg              >  1:358876/1‑140 (MQ=255)                                                                                                                             ggTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTCCGGGTAGAc         <  2:1118097/140‑1 (MQ=255)                                                                                                                              gTGCCCCCAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTCCGGGTAGACg        >  1:583860/1‑140 (MQ=255)                                                                                                                                  ccccAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTAACAAAACGTTCCGGGTAGACGCTGt    >  2:450763/1‑140 (MQ=255)                                                                                                                                    ccAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGTAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTCCGGGTAGACGCTGTCa  <  1:235139/140‑1 (MQ=255)                                                                                                                                    ccAGGCGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTCCGGGTAGACGCTGTCa  >  1:1504715/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                        AATCGCTGAGTTCCACATCTGCTTACCGGTGCCGCGGAAAGCCATAATTTTGTCGATCTGCTCTTGTGTGCCTTCGCGCAGGAAGGTGTTGAACCCGCCCGGCAACTGGTACAGCACATAGGTTGGTGCCCCCAGACGTCCCAGCTCCATCCACACGGCGGCGAGAGTAACAAACCCCGCGTCCAGACCACCGTGCTCTTCAGGGATCAGCAGACTGTCGATACCCATATCCGCCAGTGCTTTGACAAAACGTTCCGGGTAGACGCTGTCA  >  NC_000913/40015‑40285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑