Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,460,302	A→G	T417A (ACC→GCC)	paaH →	3‑hydroxyadipyl‑CoA dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,460,302	0	A	G	100.0%	343.7 / NA	89	T417A (ACC→GCC)	paaH	3‑hydroxyadipyl‑CoA dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (46/43);  total (46/43)

TGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATACCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATT  >  NC_000913/1460168‑1460438                                                                                                                                       |                                                                                                                                         tGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATgccgcc                                                                                                                                     >  2:530336/1‑140 (MQ=255)  gCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCa                                                                                                                                    >  1:801861/1‑140 (MQ=255)  gCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCa                                                                                                                                    >  2:1598959/1‑140 (MQ=255)  gCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCa                                                                                                                                    >  2:327394/1‑140 (MQ=255)   cAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCAt                                                                                                                                   <  2:949647/140‑1 (MQ=255)   cAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCAt                                                                                                                                   >  2:1035087/1‑140 (MQ=255)   cAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCAt                                                                                                                                   >  2:538647/1‑140 (MQ=255)   cAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCAt                                                                                                                                   <  2:1251203/140‑1 (MQ=255)   cAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCAt                                                                                                                                   <  2:1338722/140‑1 (MQ=255)   cAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCAt                                                                                                                                   >  2:1583198/1‑140 (MQ=255)    aaCAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATg                                                                                                                                  >  1:1562414/1‑140 (MQ=255)        gcagGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTc                                                                                                                              <  1:223821/140‑1 (MQ=255)         cagGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCt                                                                                                                             <  2:40146/140‑1 (MQ=255)         cagGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCt                                                                                                                             >  1:1239964/1‑140 (MQ=255)         cagGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCt                                                                                                                             >  2:998210/1‑140 (MQ=255)             gCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTggg                                                                                                                         >  2:476338/1‑140 (MQ=255)             gCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTggg                                                                                                                         <  1:409506/140‑1 (MQ=255)              cAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTgggg                                                                                                                        >  2:1131901/1‑140 (MQ=255)                 aaCAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGa                                                                                                                     <  1:1266400/140‑1 (MQ=255)                  aCAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGaa                                                                                                                    <  2:539197/140‑1 (MQ=255)                  aCAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGaa                                                                                                                    <  2:571107/140‑1 (MQ=255)                      tgctgcAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTAt                                                                                                                >  2:422802/1‑140 (MQ=255)                             aaTTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATg                                                                                                         <  2:957885/140‑1 (MQ=255)                              aTTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATgg                                                                                                        <  1:166896/140‑1 (MQ=255)                                tGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGcc                                                                                                      >  1:886878/1‑140 (MQ=255)                                  cAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCa                                                                                                    <  2:1022829/140‑1 (MQ=255)                                  cAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCa                                                                                                    <  1:862078/140‑1 (MQ=255)                                  cAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCa                                                                                                    <  1:113531/140‑1 (MQ=255)                                  cAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCa                                                                                                    <  2:1527787/140‑1 (MQ=255)                                  cAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCa                                                                                                    <  2:545778/140‑1 (MQ=255)                                  cAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCa                                                                                                    <  1:827307/140‑1 (MQ=255)                                  cAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCa                                                                                                    <  2:614371/140‑1 (MQ=255)                                  cAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCa                                                                                                    <  1:645252/140‑1 (MQ=255)                                  cAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCa                                                                                                    <  1:680245/140‑1 (MQ=255)                                         cccAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCt                                                                                             >  1:120931/1‑140 (MQ=255)                                          ccAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTg                                                                                            <  2:1199873/140‑1 (MQ=255)                                            aGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTggg                                                                                          <  1:114278/140‑1 (MQ=255)                                            aGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTggg                                                                                          <  1:887802/140‑1 (MQ=255)                                               aaTGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAg                                                                                       >  2:266168/1‑140 (MQ=255)                                                 tGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAgcg                                                                                     >  1:1450198/1‑140 (MQ=255)                                                 tGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAgcg                                                                                     >  1:465347/1‑140 (MQ=255)                                                   cTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCa                                                                                   >  1:1547293/1‑140 (MQ=255)                                                   cTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTAGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCa                                                                                   >  1:1449533/1‑140 (MQ=255)                                                      aTTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACt                                                                                <  1:1583198/140‑1 (MQ=255)                                                      aTTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACt                                                                                <  1:1035087/140‑1 (MQ=255)                                                        ttGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTtg                                                                              >  1:851796/1‑140 (MQ=255)                                                         tGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTtgg                                                                             >  1:261439/1‑140 (MQ=255)                                                             gAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTtggctgg                                                                         <  1:1176610/140‑1 (MQ=255)                                                              aaCGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTtggctggc                                                                        <  1:97562/140‑1 (MQ=255)                                                               aCGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCa                                                                       <  2:1562414/140‑1 (MQ=255)                                                                  gTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCg                                                                    <  1:953112/140‑1 (MQ=255)                                                                  gTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCg                                                                    <  2:1467553/140‑1 (MQ=255)                                                                           atcatcAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAg                                                           >  1:810882/1‑140 (MQ=255)                                                                            tcatcaATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAgg                                                          <  1:476338/140‑1 (MQ=255)                                                                               tcaATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTc                                                       >  1:1377076/1‑140 (MQ=255)                                                                               tcaATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTc                                                       >  1:1288704/1‑140 (MQ=255)                                                                                caATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTcc                                                      >  1:645840/1‑140 (MQ=255)                                                                                   tGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTg                                                   >  1:1272230/1‑140 (MQ=255)                                                                                    gAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGa                                                  <  2:801861/140‑1 (MQ=255)                                                                                    gAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGa                                                  <  1:1265259/140‑1 (MQ=255)                                                                                     aaGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGaa                                                 >  2:667072/1‑140 (MQ=255)                                                                                     aaGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGaa                                                 >  1:620731/1‑140 (MQ=255)                                                                                     aaGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGaa                                                 >  1:367217/1‑140 (MQ=255)                                                                                       gCCCTTGATGTGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGaaaa                                               >  1:1184121/1‑140 (MQ=255)                                                                                        cccTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCt                                                        <  2:1080071/130‑1 (MQ=255)                                                                                        cccTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCt                                                        >  1:1080071/1‑130 (MQ=255)                                                                                        cccTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAAt                                              >  2:906734/1‑140 (MQ=255)                                                                                        cccTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAAt                                              >  1:352219/1‑140 (MQ=255)                                                                                         ccTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATc                                             >  1:83399/1‑140 (MQ=255)                                                                                                 cgcTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCAt                                     <  2:465347/140‑1 (MQ=255)                                                                                                 cgcTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCAt                                     <  2:1450198/140‑1 (MQ=255)                                                                                                 cgcTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCAt                                     <  1:422802/140‑1 (MQ=255)                                                                                                           aGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCg                           <  2:1566865/140‑1 (MQ=255)                                                                                                           aGGCGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCg                           <  2:851796/140‑1 (MQ=255)                                                                                                              cGTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGCAAAGCTACAGCATCACTATGGCgaag                        >  1:1579409/1‑140 (MQ=255)                                                                                                               gTGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCgaaga                       <  2:352219/140‑1 (MQ=255)                                                                                                                tGGCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCgaagaa                      >  2:781460/1‑140 (MQ=255)                                                                                                                 ggCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAAc                     >  2:176735/1‑140 (MQ=255)                                                                                                                 ggCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAAc                     >  2:1440175/1‑140 (MQ=255)                                                                                                                  gCCTCTGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACg                    <  1:342835/140‑1 (MQ=255)                                                                                                                    ctctGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCt                  <  1:1082823/140‑1 (MQ=255)                                                                                                                    ctctGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCt                  >  1:1155929/1‑140 (MQ=255)                                                                                                                       tGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATc               >  2:283981/1‑140 (MQ=255)                                                                                                                       tGAACAGGATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATc               >  1:1524149/1‑140 (MQ=255)                                                                                                                              gATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATg        >  2:266317/1‑140 (MQ=255)                                                                                                                              gATATCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATg        >  2:463168/1‑140 (MQ=255)                                                                                                                                 atCGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGCGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGAATCACTATGGCGAAGAACGCTATCGCCCATGTTc     >  1:834378/1‑140 (MQ=255)                                                                                                                                   cGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCAt   >  1:1518581/1‑140 (MQ=255)                                                                                                                                   cGATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCAt   >  1:535178/1‑140 (MQ=255)                                                                                                                                    gATGCCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCAtt  <  2:1547293/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                         TGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATACCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATT  >  NC_000913/1460168‑1460438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑