| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,362,020 | A→G | C64C (TGT→TGC) | yfaX ← | putative DNA‑binding transcriptional regulator YfaX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,362,020 | 0 | A | G | 98.0% | 376.6 / ‑2.6 | 103 | C64C (TGT→TGC) | yfaX | putative DNA‑binding transcriptional regulator YfaX |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (51/49); total (53/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.27e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
CTGCCGTTATCAATAATCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCA > NC_000913/2361883‑2362156 | cTGCCGTTATCAATAATCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCacaagca > 2:1166288/1‑140 (MQ=255) tGCCGTTATCAATAATCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCacaagcaa > 1:1088549/1‑140 (MQ=255) tGCCGTTATCAATAATCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCacaagcaa > 2:1536465/1‑140 (MQ=255) tGCCGTTATCAATAATCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCacaagcaa > 2:515076/1‑140 (MQ=255) gTTATCAATAATCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAAt < 1:801571/140‑1 (MQ=255) aTCAATAATCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAAtttt < 1:330544/140‑1 (MQ=255) aTCAATAATCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAAtttt > 2:1586523/1‑140 (MQ=255) ataatCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTg < 1:960235/140‑1 (MQ=255) ataatCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTg < 1:1302079/140‑1 (MQ=255) taatCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTgg > 1:580668/1‑140 (MQ=255) taatCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTgg > 1:453902/1‑140 (MQ=255) tCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGa > 1:245252/1‑140 (MQ=255) cccAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATc < 1:631773/140‑1 (MQ=255) cccAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATc < 1:956794/140‑1 (MQ=255) cccAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATc < 2:1462142/140‑1 (MQ=255) cccAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATc < 1:1252043/140‑1 (MQ=255) ccAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCa > 2:1326610/1‑140 (MQ=255) ggTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAgg < 1:1573919/140‑1 (MQ=255) gTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGc > 1:3758/1‑140 (MQ=255) aTAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGa > 2:799694/1‑140 (MQ=255) cAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAAc > 2:1149951/1‑140 (MQ=255) gCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGc > 2:343482/1‑140 (MQ=255) gCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGc > 1:18545/1‑140 (MQ=255) cccGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCt < 2:453902/140‑1 (MQ=255) cccGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCt > 2:1522027/1‑140 (MQ=255) cccGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCt < 2:28574/140‑1 (MQ=255) cccGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCt > 1:144922/1‑140 (MQ=255) ccGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTg > 1:1186350/1‑140 (MQ=255) tggtATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGc > 2:792147/1‑140 (MQ=255) ggtATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGcc < 1:1035261/140‑1 (MQ=255) aTCCATCAGTTGCGTCAAGCGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGa < 1:1300365/140‑1 (MQ=255) ccATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGt < 2:1116956/140‑1 (MQ=255) cAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCAt > 2:687979/1‑140 (MQ=255) cAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCAt > 2:836344/1‑140 (MQ=255) aGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCAtt < 2:654353/140‑1 (MQ=255) aGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCAtt < 1:698200/140‑1 (MQ=255) gTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTa > 1:398128/1‑140 (MQ=255) ttGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTaa > 2:1600487/1‑140 (MQ=255) ttGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTaa > 2:1194839/1‑140 (MQ=255) ttGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTaa > 1:1386408/1‑140 (MQ=255) ttGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTaa > 2:809729/1‑140 (MQ=255) ttGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTaa > 2:852752/1‑140 (MQ=255) gCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGTCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAagc > 1:1481493/1‑140 (MQ=255) gCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAagc > 2:911789/1‑140 (MQ=255) gCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAagc < 1:1148149/140‑1 (MQ=255) gCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAagc < 1:62913/140‑1 (MQ=255) gCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAagc > 1:411646/1‑140 (MQ=255) cGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAagca < 1:708209/140‑1 (MQ=255) cGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAagca > 2:1167763/1‑140 (MQ=255) gTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAagcag > 1:1264806/1‑140 (MQ=255) tCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAagcagc > 1:1073089/1‑140 (MQ=255) tCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCg < 1:959344/140‑1 (MQ=255) cGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGt < 1:1563755/140‑1 (MQ=255) ttCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAg > 2:334197/1‑140 (MQ=255) tCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAgg < 1:1586523/140‑1 (MQ=255) ggAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGAtt > 2:750763/1‑140 (MQ=255) ggAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGAtt > 2:550134/1‑140 (MQ=255) agaTCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTcc < 2:1264806/140‑1 (MQ=255) aTCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCa > 1:1125162/1‑140 (MQ=255) aTCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCa < 1:343482/140‑1 (MQ=255) aTCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCa < 1:817535/140‑1 (MQ=255) tCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCaa > 1:1360464/1‑140 (MQ=255) tCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCaa < 2:613078/140‑1 (MQ=255) ccATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAAt < 1:575545/140‑1 (MQ=255) ccATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAAt < 1:911789/140‑1 (MQ=255) ccATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAAt < 2:18545/140‑1 (MQ=255) ccATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAAt < 1:836344/140‑1 (MQ=255) ccATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAAt < 1:85473/140‑1 (MQ=255) cATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAAtg > 2:719117/1‑140 (MQ=255) cATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAAtg < 2:144922/140‑1 (MQ=255) tGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCa > 2:1536842/1‑140 (MQ=255) cTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAAt > 1:618563/1‑140 (MQ=255) ttAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATg < 1:499282/140‑1 (MQ=255) cGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCa > 2:781560/1‑133 (MQ=255) cGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCa < 1:781560/133‑1 (MQ=255) cGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGAtcg > 1:1167354/1‑140 (MQ=255) cGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGAtcg > 1:36565/1‑140 (MQ=255) aTGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGAtcgtcg < 1:809729/140‑1 (MQ=255) aTGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGAtcgtcg < 1:1194839/140‑1 (MQ=255) aTGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGAtcgtcg < 1:4547/140‑1 (MQ=255) aTGACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGAtcgtcg < 1:1326610/140‑1 (MQ=255) gACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCgca > 2:226125/1‑140 (MQ=255) gACCGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCgca > 1:1284863/1‑140 (MQ=255) cGGAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCgcagca < 1:297298/140‑1 (MQ=255) gAAAGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACt > 2:173798/1‑140 (MQ=255) aaGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCGTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTAc < 1:1522027/140‑1 (MQ=255) aaGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTAc < 1:1402956/140‑1 (MQ=255) aGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACa < 1:122536/140‑1 (MQ=255) aGCTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACa < 2:1360464/140‑1 (MQ=255) cTCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAgg > 2:1438707/1‑140 (MQ=255) tCCACCAGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAggg < 2:1186350/140‑1 (MQ=255) caccaGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGc < 1:1600487/140‑1 (MQ=255) caccaGCCTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGc > 1:340842/1‑140 (MQ=255) cTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGCCGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCg < 2:316645/140‑1 (MQ=255) cTGGTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCg > 1:1133203/1‑140 (MQ=255) ggTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCggg < 1:687979/140‑1 (MQ=255) gTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGc > 1:428404/1‑140 (MQ=255) gTCCACAAGCAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGc > 1:929870/1‑140 (MQ=255) cacaAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAAt < 1:1149951/140‑1 (MQ=255) caagcaaaAATTTTCCTGGGGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCa > 2:488203/1‑140 (MQ=255) | CTGCCGTTATCAATAATCCCCAGGTGACATAACAGCCCGGTGGTATCCATCAGTTGCGTCAAACGCGGTCGAGCCAGTTCCCGGAGATCCATCTTGCTTAACGCATGACCGGAAAGCTCCACCAGCCTGGTCCACAAACAAAAATTTTCCTGGTGATCAAGGCTAAGAAAACGCTGACGCCTGAGTTCATTAAGCAGCAAATAGGCCGTGCTTTTAGGGATTCCCAATGTGTCAATGATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCA > NC_000913/2361883‑2362156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |