BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,776,903	A→G	A9A (GCA→GCG)	ypjJ →	CP4‑57 prophage; DUF987 domain‑containing protein YpjJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,776,903	0	A	G	100.0%	421.2 / NA	111	A9A (GCA→GCG)	ypjJ	CP4‑57 prophage; DUF987 domain‑containing protein YpjJ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (56/55); total (56/55)

Only 100 of 114 total aligned reads displayed.

CGTCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCG  >  NC_000913/2776767‑2777039

cGTCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATg                                                                                                                                       >  2:857562/1‑140 (MQ=255)

cGTCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATg                                                                                                                                       >  2:201961/1‑140 (MQ=255)

cGTCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATg                                                                                                                                       >  2:602294/1‑140 (MQ=255)

 gTCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGa                                                                                                                                      <  2:771227/140‑1 (MQ=255)

  tCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGAc                                                                                                                                     >  2:959787/1‑140 (MQ=255)

  tCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGAc                                                                                                                                     <  2:937394/140‑1 (MQ=255)

  tCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGAc                                                                                                                                     >  2:750087/1‑140 (MQ=255)

  tCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGAc                                                                                                                                     >  2:1137366/1‑140 (MQ=255)

  tCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGAc                                                                                                                                     >  2:36761/1‑140 (MQ=255)

        gCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGAtata                                                                                                                               >  1:1242127/1‑140 (MQ=255)

         cAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATAc                                                                                                                              <  1:199776/140‑1 (MQ=255)

           ggCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCg                                                                                                                            <  1:638369/140‑1 (MQ=255)

            gcgcTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGc                                                                                                                           >  2:528584/1‑140 (MQ=255)

              gcTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCa                                                                                                                         <  1:1384245/140‑1 (MQ=255)

              gcTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCATTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCa                                                                                                                         <  1:361663/140‑1 (MQ=255)

               cTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAg                                                                                                                        >  1:786057/1‑140 (MQ=255)

               cTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAg                                                                                                                        <  2:1013526/140‑1 (MQ=255)

                     cTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCt                                                                                                                  <  2:259099/140‑1 (MQ=255)

                     cTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCt                                                                                                                  <  2:100437/140‑1 (MQ=255)

                        gTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAg                                                                                                               >  1:1534183/1‑140 (MQ=255)

                         ttGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGt                                                                                                              >  1:1324520/1‑140 (MQ=255)

                         ttGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGt                                                                                                              <  2:708698/140‑1 (MQ=255)

                          tGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTc                                                                                                             >  2:1150539/1‑140 (MQ=38)

                          tGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTc                                                                                                             >  2:1391902/1‑140 (MQ=38)

                                  gtgtCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCt                                                                                                     >  1:1529019/1‑140 (MQ=37)

                                    gtCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCttt                                                                                                   <  1:1575241/140‑1 (MQ=37)

                                    gtCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCttt                                                                                                   <  1:1130910/140‑1 (MQ=37)

                                    gtCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCttt                                                                                                   >  1:301638/1‑140 (MQ=37)

                                      cccTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCg                                                                                                 >  1:1302253/1‑140 (MQ=38)

                                         tGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTa                                                                                              <  2:289426/140‑1 (MQ=37)

                                         tGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTa                                                                                              <  1:10717/140‑1 (MQ=37)

                                          gACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTAc                                                                                             >  1:695292/1‑140 (MQ=38)

                                          gACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTAc                                                                                             >  1:452607/1‑140 (MQ=38)

                                           aCCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACt                                                                                            >  2:1000429/1‑140 (MQ=37)

                                             cATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGc                                                                                          <  1:378450/140‑1 (MQ=37)

                                              aTCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCa                                                                                         <  1:387435/140‑1 (MQ=37)

                                               tCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGGTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCAc                                                                                        <  2:602400/140‑1 (MQ=255)

                                               tCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCAc                                                                                        <  2:620855/140‑1 (MQ=37)

                                               tCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCAc                                                                                        <  2:1498334/140‑1 (MQ=37)

                                               tCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCAc                                                                                        <  1:121850/140‑1 (MQ=37)

                                               tCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCAc                                                                                        >  2:758417/1‑140 (MQ=38)

                                               tCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCAc                                                                                        >  1:839365/1‑140 (MQ=38)

                                                cTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCAcc                                                                                       >  1:1496679/1‑140 (MQ=37)

                                                cTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCAcc                                                                                       >  1:400475/1‑140 (MQ=38)

                                                cTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCAcc                                                                                       >  2:1225731/1‑140 (MQ=38)

                                                 tGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCg                                                                                      <  1:1377549/140‑1 (MQ=37)

                                                   aTTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGa                                                                                    <  2:849686/140‑1 (MQ=38)

                                                       ttgGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAat                                                                                >  2:1116910/1‑140 (MQ=255)

                                                         ggtggCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAatat                                                                              >  1:398115/1‑140 (MQ=38)

                                                          gtggCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATc                                                                             >  2:599495/1‑140 (MQ=255)

                                                          gtggCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATc                                                                             >  1:1564623/1‑140 (MQ=255)

                                                          gtggCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATc                                                                             >  2:762822/1‑140 (MQ=255)

                                                            ggcaggcaAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAg                                                                           >  1:437031/1‑140 (MQ=255)

                                                             gcaggcaAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGt                                                                          >  2:1533812/1‑140 (MQ=255)

                                                               aggcaAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTgg                                                                        <  2:1324520/140‑1 (MQ=255)

                                                               aggcaAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTgg                                                                        <  2:1225963/140‑1 (MQ=255)

                                                                         aTTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGGATTATCAGTAAACGCCGGGCGGTGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCg                                                              <  1:1516788/140‑1 (MQ=255)

                                                                         aTTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCg                                                              <  1:1562879/140‑1 (MQ=255)

                                                                           tcgttcgCAGAACCCGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTc                                                            <  1:960669/140‑1 (MQ=255)

                                                                           tcgttcgCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTc                                                            <  2:1561499/140‑1 (MQ=255)

                                                                            cgttcgCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCt                                                           <  2:301638/140‑1 (MQ=255)

                                                                            cgttcgCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCt                                                           <  2:59988/140‑1 (MQ=255)

                                                                               tcgCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTc                                                        >  1:655504/1‑140 (MQ=255)

                                                                                    gaacggggTGTGCTTTGAGGTATTACATGAGAATTATCAGTAGCCGCGGGGCGAGGACGATATGCCGCCAGCATGCTGAGGCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTTGCACGGTAGCGTCTGTCATTac                                                   <  2:1115827/134‑1 (MQ=11)

                                                                                    gAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTac                                                   <  2:655504/140‑1 (MQ=255)

                                                                                     aaCACGGTCTGCTTTGAGTTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTaca                                                  <  1:1093512/140‑1 (MQ=255)

                                                                                     aaCACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTaca                                                  <  1:1391902/140‑1 (MQ=255)

                                                                                       cacGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACAcc                                                >  1:291318/1‑140 (MQ=255)

                                                                                         cGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCgg                                              <  2:695292/140‑1 (MQ=255)

                                                                                          ggTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGc                                             <  1:208212/140‑1 (MQ=255)

                                                                                              tGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAggg                                         <  2:216943/140‑1 (MQ=255)

                                                                                               gCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGa                                        >  1:1300902/1‑140 (MQ=255)

                                                                                               gCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGa                                        <  2:400475/140‑1 (MQ=255)

                                                                                               gCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGa                                        >  2:589960/1‑140 (MQ=255)

                                                                                                    gAGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTc                                   >  2:857469/1‑140 (MQ=255)

                                                                                                     aGGTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTcc                                  >  1:592730/1‑140 (MQ=255)

                                                                                                      ggTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCg                                 <  1:1150539/140‑1 (MQ=255)

                                                                                                      ggTATTACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCg                                 >  1:1545192/1‑140 (MQ=255)

                                                                                                          ttACATGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGata                             >  2:1362599/1‑140 (MQ=255)

                                                                                                               tGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATcaca                        <  1:589960/140‑1 (MQ=255)

                                                                                                               tGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATcaca                        <  1:145219/140‑1 (MQ=255)

                                                                                                               tGAGAATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATcaca                        >  2:1006507/1‑140 (MQ=255)

                                                                                                                 agaATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAgg                      >  2:791539/1‑140 (MQ=255)

                                                                                                                 agaATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAgg                      >  1:1037975/1‑140 (MQ=255)

                                                                                                                 agaATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAgg                      >  2:1489887/1‑140 (MQ=255)

                                                                                                                 agaATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAgg                      <  1:959787/140‑1 (MQ=255)

                                                                                                                  gaATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGa                     >  2:1427295/1‑140 (MQ=255)

                                                                                                                  gaATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGa                     >  1:979796/1‑140 (MQ=255)

                                                                                                                  gaATTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGa                     >  1:482093/1‑140 (MQ=255)

                                                                                                                    aTTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGt                   >  1:1374176/1‑140 (MQ=255)

                                                                                                                    aTTATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGt                   >  1:888121/1‑140 (MQ=255)

                                                                                                                     ttATCAGTAACCGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTc                  <  2:1310299/140‑1 (MQ=255)

                                                                                                                     ttATCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTc                  <  1:1093884/140‑1 (MQ=255)

                                                                                                                        tCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTg               <  2:839365/140‑1 (MQ=255)

                                                                                                                        tCAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTg               >  1:44612/1‑140 (MQ=255)

                                                                                                                         cAGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTgg              <  2:218870/140‑1 (MQ=255)

                                                                                                                          aGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGc             <  2:1529019/140‑1 (MQ=255)

                                                                                                                          aGTAAACGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGc             <  1:857562/140‑1 (MQ=255)

                                                                                                                             aaaCGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCtgt          >  2:1226682/1‑140 (MQ=255)

                                                                                                                                cGCCGGGCGATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTa       >  1:1534003/1‑140 (MQ=255)

CGTCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGAGGTATTACATGAGAATTATCAGTAAACGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCG  >  NC_000913/2776767‑2777039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`