Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,668,544	(C)6→7	coding (645/1398 nt)	ccp ←	cytochrome c peroxidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,668,538	1	.	C	98.9%	324.3 / ‑3.5	90	coding (651/1398 nt)	ccp	cytochrome c peroxidase
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base C (47/42);  total (48/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01

CAGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCAC  >  NC_000913/3668405‑3668672                                                                                                                                       |                                                                                                                                        caGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑‑cccccc                                                                                                                                  <  1:672700/140‑1 (MQ=255)  aGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑‑ccccccc                                                                                                                                 <  2:867080/140‑2 (MQ=255)        aTCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑‑ccccccc                                                                                                                                 <  2:885674/134‑2 (MQ=255)        aTCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑‑ccccccc                                                                                                                                 >  1:885674/1‑133 (MQ=255)         tCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCa                                                                                                                           <  1:382497/140‑1 (MQ=255)           cTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCAtt                                                                                                                             <  2:462734/136‑1 (MQ=255)           cTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCAtt                                                                                                                             >  1:462734/1‑136 (MQ=255)              cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCa                                                                                                                      <  2:379564/140‑1 (MQ=255)              cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCa                                                                                                                      >  2:132860/1‑140 (MQ=255)              cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑‑cc                                                                                                                                      <  2:333841/123‑1 (MQ=255)              cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑‑cc                                                                                                                                      >  1:333841/1‑123 (MQ=255)                  gTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGc                                                                                                                  >  1:1038616/1‑140 (MQ=255)                   ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCAtt                                                                                                                             >  1:614729/1‑128 (MQ=255)                   ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCAtt                                                                                                                             <  2:614729/128‑1 (MQ=255)                   ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCa                                                                                                                 >  1:11219/1‑140 (MQ=255)                      ccGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATg                                                                                                              >  1:98188/1‑140 (MQ=255)                      ccGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATg                                                                                                              >  1:311456/1‑140 (MQ=255)                       cGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGa                                                                                                             <  1:905885/140‑1 (MQ=255)                         cACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAgc                                                                                                           <  1:603804/140‑1 (MQ=255)                         cACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAgc                                                                                                           <  2:783482/140‑1 (MQ=255)                         cACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAgc                                                                                                           <  2:111631/140‑1 (MQ=255)                           cGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAgcgc                                                                                                         >  1:241635/1‑140 (MQ=255)                           cGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAgcgc                                                                                                         <  1:952809/140‑1 (MQ=255)                           cGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAgcgc                                                                                                         >  1:983348/1‑140 (MQ=255)                           cGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAgcgc                                                                                                         >  1:1131448/1‑140 (MQ=255)                                       aaCTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGATGc                                                                                             <  2:509124/140‑1 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTATTCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:405875/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATc                                                                                         >  2:473539/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGaaa                                                                                                   <  2:736311/129‑1 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGaaa                                                                                                   >  1:736311/1‑129 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:948347/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:951719/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:987378/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:272292/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:734345/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:948940/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:913566/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:224917/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:91311/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:880243/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:437273/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:553676/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:741219/1‑140 (MQ=255)                                            cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAg                                                                                       >  2:325778/1‑140 (MQ=255)                                            cTCAACGTTAAATAATGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:234833/1‑140 (MQ=255)                                                   ttAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATa                                                                                 <  2:11219/140‑1 (MQ=255)                                                       aTACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACg                                                                             <  1:741219/140‑1 (MQ=255)                                                        tACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATG‑TTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:1158191/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTATTCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:405875/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:514347/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:311456/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:721559/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:880243/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:734345/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:335880/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:98188/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:987378/140‑1 (MQ=255)                                                         aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATCGTGCTATCAGCCGATAAACggg                                                                           <  2:983348/140‑1 (MQ=255)                                                           tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:862113/138‑1 (MQ=255)                                                           tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           >  2:114789/1‑138 (MQ=255)                                                           tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           >  2:862113/1‑138 (MQ=255)                                                           tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:114789/138‑1 (MQ=255)                                                           tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           >  1:1143200/1‑138 (MQ=255)                                                           tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                         >  2:474763/1‑140 (MQ=255)                                                           tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                         >  2:1088756/1‑140 (MQ=255)                                                           tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                         <  1:272292/140‑1 (MQ=255)                                                           tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGACACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:1143200/138‑1 (MQ=255)                                                            gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACg                                                                             <  1:1130604/135‑1 (MQ=255)                                                            gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACg                                                                             >  2:1130604/1‑135 (MQ=255)                                                             aGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATaaa                                                                               >  2:141471/1‑132 (MQ=255)                                                             aGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATaaa                                                                               <  1:141471/132‑1 (MQ=255)                                                             aGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATc                                                                       >  1:873544/1‑140 (MQ=255)                                                                tAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTg                                                                    <  2:951719/140‑1 (MQ=255)                                                                   aTACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATa                                                                 <  1:234833/140‑1 (MQ=255)                                                                       cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATGCAgc                                                             >  2:1134536/1‑140 (MQ=255)                                                                       cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgc                                                             >  1:303402/1‑140 (MQ=255)                                                                       cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgc                                                             >  1:448798/1‑140 (MQ=255)                                                                          cGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCa                                                          <  2:241635/140‑1 (MQ=255)                                                                                          ccAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACtt                                          >  1:287633/1‑140 (MQ=255)                                                                                          ccAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACtt                                          >  1:969826/1‑140 (MQ=255)                                                                                              cTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTg                                      >  1:601567/1‑140 (MQ=255)                                                                                               tGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTgc                                     <  2:601567/140‑1 (MQ=255)                                                                                                gcgcCACCAACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTgcg                                    <  1:1071247/140‑1 (MQ=255)                                                                                                   ccaccaACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCAt                                 >  2:1160290/1‑140 (MQ=255)                                                                                                   ccaccaACACCAATCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCAt                                 >  2:296570/1‑140 (MQ=255)                                                                                                            ccaaTCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCa                        <  2:437273/140‑1 (MQ=255)                                                                                                              aaTCGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGt                      >  2:114155/1‑140 (MQ=255)                                                                                                                tcaaTGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGttt                    >  2:1072123/4‑140 (MQ=255)                                                                                                                 cGATGTTTTTCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGtttt                   >  1:68446/1‑140 (MQ=255)                                                                                                                       ttttCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg             <  1:1088756/140‑1 (MQ=255)                                                                                                                       ttttCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg             <  1:1072123/140‑1 (MQ=255)                                                                                                                       ttttCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg             <  2:303402/140‑1 (MQ=255)                                                                                                                          tCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGa            >  1:689394/1‑138 (MQ=255)                                                                                                                          tCTGCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGa            <  2:689394/138‑1 (MQ=255)                                                                                                                             gCCATCGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGc       <  2:1131448/140‑1 (MQ=255)                                                                                                                                  cGACGC‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCAc  <  2:224917/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                        CAGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCAC  >  NC_000913/3668405‑3668672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑