| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3484544 = | 59 (0.810) | 4 (0.060) | 4/256 | 5.6 | 7.0% | coding (55/870 nt) | prkB | putative phosphoribulokinase |
| ? | NC_000913 | = 3484540 | 51 (0.760) | coding (51/870 nt) | prkB | putative phosphoribulokinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCCGCGCAGTCAGTTTCGCGAATAACCTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCGGGCGGC > NC_000913/3484411‑3484682 | tGCCGCGCAGTCAGTTTCGCGAATAACCTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGaccaccacca > 2:167394/1‑140 (MQ=255)tGCCGCGCAGTCAGTTTCGCGAATAACCTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGaccaccacca > 2:1088092/1‑140 (MQ=255)tGCCGCGCAGTCAGTTTCGCGAATAACCTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGaccaccacca > 2:1048384/1‑140 (MQ=255)tGCCGCGCAGTCAGTTTCGCGAATAACCTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGaccaccacca > 1:618440/1‑140 (MQ=255) cgcAGTCAGTTTCGCGAATAACCTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGc > 2:1224340/1‑140 (MQ=255) cagtTTCGCGAATAACCTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTcgcg < 1:906675/140‑1 (MQ=255) ttCGCGAATAACCTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTc > 2:127914/1‑140 (MQ=255) cTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTcg < 2:320924/140‑1 (MQ=255) tGCAACCGTCGGCGGACGGGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTcgc < 1:127914/140‑1 (MQ=255) tGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTcgc < 1:1048384/140‑1 (MQ=255) tGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTcgc < 1:89542/140‑1 (MQ=255) tGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTcgc < 1:1224340/140‑1 (MQ=255) tGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTcgc < 1:167394/140‑1 (MQ=255) gCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTcgcg < 2:1080882/140‑1 (MQ=255) gTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTcgc > 1:956423/1‑133 (MQ=255) gTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTcgc < 2:956423/133‑1 (MQ=255) ataataATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAg < 2:618440/140‑1 (MQ=255) ataataATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAg < 1:223472/140‑1 (MQ=255) aataatGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCt < 2:701498/140‑1 (MQ=255) aatGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAg > 2:908710/1‑140 (MQ=255) aTAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTgg > 2:142355/1‑140 (MQ=255) tAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGa > 2:566125/1‑140 (MQ=255) aGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGaa > 1:311468/1‑140 (MQ=255) aGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGaa > 1:441655/1‑140 (MQ=255) cTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCtgca > 2:288696/1‑122 (MQ=255) cTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCtgca < 1:288696/122‑1 (MQ=255) tAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGc > 2:365747/1‑140 (MQ=255) aGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGa < 1:365747/140‑1 (MQ=255) aGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGa > 1:150368/1‑140 (MQ=255) tGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGtt > 1:845819/1‑140 (MQ=255) ttACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCTCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCAc > 2:890615/1‑140 (MQ=255) aCTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGtttt < 1:647861/135‑1 (MQ=255) aCTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGtttt > 2:647861/1‑135 (MQ=255) aCTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGG‑‑‑ACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTa > 2:825149/1‑140 (MQ=255) tCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTacac > 2:1055959/1‑140 (MQ=255) tCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTacac > 1:406360/1‑140 (MQ=255) tCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTacac > 1:307088/1‑140 (MQ=255) tCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTacac > 2:1143338/1‑140 (MQ=255) tCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTacac > 1:490499/1‑140 (MQ=255) tCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTacac > 1:765920/1‑140 (MQ=255) cTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACAcc < 1:142355/140‑1 (MQ=255) tGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGtttt > 2:495747/1‑127 (MQ=255) tGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGtttt < 1:495747/127‑1 (MQ=255) tGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGG‑‑‑ACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACAcccgcc < 1:328078/140‑1 (MQ=255) tGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGG‑‑‑ACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACAcccgcc > 2:328078/1‑140 (MQ=255) gCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTaca > 1:936277/1‑136 (MQ=255) gCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTaca < 2:936277/136‑1 (MQ=255) cAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACAcccgcc > 1:501570/1‑140 (MQ=255) aaCATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACAcccgcccg < 2:490499/140‑1 (MQ=255) aCATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCgg > 1:128825/1‑140 (MQ=255) cATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACa < 2:983113/140‑1 (MQ=255) tGCGGTAACAGGATCCAGCGGCGCGGGG‑‑‑ACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGa < 1:825149/140‑1 (MQ=255) gCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGc < 2:465708/140‑1 (MQ=255) gCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGc < 2:765920/140‑1 (MQ=255) ggATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCaa > 1:732545/1‑140 (MQ=255) tCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGATAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAgc > 1:1007915/1‑140 (MQ=255) cgGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGcc > 2:1121405/1‑140 (MQ=255) ggACCACCATCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACTCCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCggg < 2:765358/140‑1 (MQ=255) ggACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCggg < 1:1121405/140‑1 (MQ=255) accaccaccaccAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCGggcg < 2:501570/140‑1 (MQ=255) accaccaccaccAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCGggcg < 2:307088/140‑1 (MQ=255) ccaccaccaccaGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCGggcgg < 1:908710/140‑1 (MQ=255) caccaccaccaGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCGggcggc < 2:311468/140‑1 (MQ=255) | TGCCGCGCAGTCAGTTTCGCGAATAACCTGCAACCGTCGGCGGACGAGATAATAATGATAGCTAAGTCATGGAGTTACTATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCGGGCGGC > NC_000913/3484411‑3484682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |