BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	407,185	T→C	intergenic (+15/‑243)	yaiA → / → aroM	protein YaiA/protein AroM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	407,185	0	T	C	100.0%	430.9 / NA	115	intergenic (+15/‑243)	yaiA/aroM	protein YaiA/protein AroM
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (58/57); total (58/57)

Only 100 of 117 total aligned reads displayed.

ACGGTAACCTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATT  >  NC_000913/407048‑407310

aCGGTAACCTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCg                                                                                                                             >  1:711155/1‑140 (MQ=255)

aCGGTAACCTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCg                                                                                                                             >  1:104359/1‑140 (MQ=255)

   gTAACCTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGaa                                                                                                                          <  1:863778/140‑1 (MQ=255)

      aCCTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAggg                                                                                                                       >  2:642872/1‑140 (MQ=255)

       ccTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGa                                                                                                                      >  2:689987/1‑140 (MQ=255)

          ggTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAAGGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTc                                                                                                                   >  2:1074183/1‑140 (MQ=255)

          ggTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTc                                                                                                                   >  1:710283/1‑140 (MQ=255)

           gTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCt                                                                                                                  <  1:689987/140‑1 (MQ=255)

              ccAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAg                                                                                                               <  1:768658/140‑1 (MQ=255)

                 aCTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAGCGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGc                                                                                                            <  2:1101346/140‑1 (MQ=255)

                 aCTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGc                                                                                                            <  2:915934/140‑1 (MQ=255)

                  cgcAGTGCCGATCATCCGAAACGAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGcc                                                                                                           >  2:172921/3‑140 (MQ=255)

                    cAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCAc                                                                                                         <  2:339743/140‑1 (MQ=255)

                     agagCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGaa                                                                                                                          >  1:193359/1‑122 (MQ=255)

                     agagCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGaa                                                                                                                          <  2:193359/122‑1 (MQ=255)

                     agagCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGcc                                                                                                           >  2:810469/1‑137 (MQ=255)

                     agagCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACt                                                                                                        >  1:1013682/1‑140 (MQ=255)

                     agagCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACt                                                                                                        >  1:376852/1‑140 (MQ=255)

                     agagCCGATCATCCT‑AACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTa                                                                                                       >  1:525469/1‑140 (MQ=255)

                       agCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGTAAGGGATTCTGAGTGCCACTAc                                                                                                      <  1:27123/140‑1 (MQ=255)

                       agCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTAc                                                                                                      >  1:933568/1‑140 (MQ=255)

                          cGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACttca                                                                                                     <  1:4850/138‑4 (MQ=255)

                          cGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTTCa                                                                                                     >  2:4850/1‑138 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTg                                                                                                                 >  2:954232/1‑124 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTg                                                                                                                 <  1:954232/124‑1 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTg                                                                                                             <  1:975075/128‑1 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTg                                                                                                             >  2:975075/1‑128 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTg                                                                                                             <  2:1143804/128‑1 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTg                                                                                                             >  1:1143804/1‑128 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGc                                                                                                            >  1:646381/1‑129 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGc                                                                                                            <  2:646381/129‑1 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCAc                                                                                                         <  2:808002/132‑1 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCAc                                                                                                         >  1:808002/1‑132 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAggg                                                                                                 >  1:654392/1‑140 (MQ=255)

                            atcatcCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAggg                                                                                                 >  2:1012207/1‑140 (MQ=255)

                                 ccTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTg                                                                                            >  2:645107/1‑140 (MQ=255)

                                          gACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACAtt                                                                                   >  2:563354/1‑140 (MQ=255)

                                           aCTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACTCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACAttt                                                                                  >  1:547172/1‑140 (MQ=255)

                                           aCTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACAttt                                                                                  >  2:598356/1‑140 (MQ=255)

                                           aCTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACAttt                                                                                  >  1:1091780/1‑140 (MQ=255)

                                           aCTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACAttt                                                                                  >  1:569857/1‑140 (MQ=255)

                                           aCTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACAttt                                                                                  >  2:341681/1‑140 (MQ=255)

                                           aCTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACAttt                                                                                  >  1:1060749/1‑140 (MQ=255)

                                               gTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCa                                                                              <  1:947903/140‑1 (MQ=255)

                                                ttGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCAt                                                                             >  1:503040/1‑140 (MQ=255)

                                                        tGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATg                                                                     >  1:146148/1‑140 (MQ=255)

                                                         gAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGt                                                                    >  1:1199602/1‑140 (MQ=255)

                                                               ccGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACGTTTTTCATAATTCATGTTTTTCt                                                              <  2:376852/140‑1 (MQ=255)

                                                               ccGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCt                                                              >  2:213696/1‑140 (MQ=255)

                                                               ccGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCt                                                              >  1:708081/1‑140 (MQ=255)

                                                                cGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCta                                                             <  1:969162/140‑1 (MQ=255)

                                                                cGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCta                                                             <  1:598356/140‑1 (MQ=255)

                                                                  aCCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaat                                                           >  1:619378/1‑140 (MQ=255)

                                                                  aCCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCt                                                              >  1:1010548/1‑137 (MQ=255)

                                                                  aCCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCt                                                              <  2:1010548/137‑1 (MQ=255)

                                                                      cTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaataa                                                         >  1:246737/1‑138 (MQ=255)

                                                                      cTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaataa                                                         <  2:246737/138‑1 (MQ=255)

                                                                       tCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTa                                                      <  2:11072/140‑1 (MQ=255)

                                                                       tCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTa                                                      <  2:754512/140‑1 (MQ=255)

                                                                         aGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGa                                                    <  2:653601/140‑1 (MQ=255)

                                                                          ggAAGCGATGGATGCGAAAAAACGCTATGAGGACTCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGaa                                                   <  2:547172/140‑1 (MQ=255)

                                                                            aaGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAata                                                 <  2:1013682/140‑1 (MQ=255)

                                                                             aGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTTACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCATCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAatat                                                <  2:569857/140‑1 (MQ=255)

                                                                             aGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAatat                                                <  2:146148/140‑1 (MQ=255)

                                                                                gatggatgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCt                                                              <  1:530236/123‑1 (MQ=255)

                                                                                gatggatgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCt                                                              >  2:530236/1‑123 (MQ=255)

                                                                                 atggatgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAatat                                                >  1:1039603/1‑136 (MQ=255)

                                                                                 atggatgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTaaa                                            >  2:19355/1‑140 (MQ=255)

                                                                                 atggatgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTaaa                                            >  1:236589/1‑140 (MQ=255)

                                                                                 atggatgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAAACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTaaa                                            >  1:942629/1‑140 (MQ=255)

                                                                                     atgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaat                                        >  2:788899/1‑140 (MQ=255)

                                                                                     atgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAAACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaat                                        <  2:942629/140‑1 (MQ=255)

                                                                                        cGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaataac                                     <  2:966251/140‑1 (MQ=255)

                                                                                         gAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaataaca                                    <  2:104359/140‑1 (MQ=255)

                                                                                         gAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaataaca                                    <  2:503040/140‑1 (MQ=255)

                                                                                         gAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaataaca                                    <  1:788899/140‑1 (MQ=255)

                                                                                            aaaaCGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCTTGTTTTTCTAATAATTAGAATATTAAACAATAACAATc                                 <  1:645107/140‑1 (MQ=255)

                                                                                              aaCGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAAGGATCTGCGTCCCATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCa                               <  2:321119/140‑1 (MQ=255)

                                                                                                               gACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTg                         <  2:267700/129‑1 (MQ=255)

                                                                                                               gACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTg                         >  1:267700/1‑129 (MQ=255)

                                                                                                               gACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg              <  1:1012207/140‑1 (MQ=255)

                                                                                                               gACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg              <  1:213696/140‑1 (MQ=255)

                                                                                                               gACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg              >  1:73121/1‑140 (MQ=255)

                                                                                                               gACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg              >  2:533112/1‑140 (MQ=255)

                                                                                                               gACAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg              >  2:408495/1‑140 (MQ=255)

                                                                                                                aCAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGa             <  2:987951/140‑1 (MQ=255)

                                                                                                                aCAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGa             <  1:830345/140‑1 (MQ=255)

                                                                                                                aCAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGa             <  2:1091780/140‑1 (MQ=255)

                                                                                                                 cAAAGAGTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGaa            <  2:1049896/140‑1 (MQ=255)

                                                                                                                    agagTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCt         <  1:43041/140‑1 (MQ=255)

                                                                                                                      agTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCttt       >  1:418426/1‑140 (MQ=255)

                                                                                                                      agTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCttt       >  2:413382/1‑140 (MQ=255)

                                                                                                                      agTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCttt       <  2:708081/140‑1 (MQ=255)

                                                                                                                      agTGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCttt       >  1:1052291/1‑140 (MQ=255)

                                                                                                                        tGACCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTAc     >  2:810562/1‑140 (MQ=255)

                                                                                                                          aCCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACAt   >  1:1006230/1‑140 (MQ=255)

                                                                                                                          aCCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACAt   >  2:291276/1‑140 (MQ=255)

                                                                                                                          aCCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACAt   >  1:654889/1‑140 (MQ=255)

                                                                                                                          aCCGCATCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACAt   >  1:496825/1‑140 (MQ=255)

                                                                                                                                tCAGACTGCCCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg              <  2:507440/123‑1 (MQ=255)

ACGGTAACCTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATT  >  NC_000913/407048‑407310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`