BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,546,701	C→T	Q536* (CAA→TAA)	fimD →	type I fimbriae usher protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,546,701	0	C	T	100.0%	416.1 / NA	115	Q536* (CAA→TAA)	fimD	type I fimbriae usher protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (51/64); total (51/64)

Only 100 of 115 total aligned reads displayed.

CTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCTCAGCTATAGC  >  NC_000913/4546564‑4546835

cTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTaa                                                                                                                                      >  1:1024847/1‑140 (MQ=255)

      caacaTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCggg                                                                                                                                <  2:680687/140‑1 (MQ=255)

        acaTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGgcg                                                                                                                              <  2:448786/140‑1 (MQ=255)

           tACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGcac                                                                                                                           >  1:817221/1‑140 (MQ=255)

             cAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACAt                                                                                                                         >  2:803043/1‑140 (MQ=255)

              aGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATc                                                                                                                        >  1:1006998/1‑140 (MQ=255)

              aGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATc                                                                                                                        <  2:1024847/140‑1 (MQ=255)

              aGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATc                                                                                                                        >  1:960708/1‑140 (MQ=255)

               gTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCa                                                                                                                       >  1:468721/1‑140 (MQ=255)

               gTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCa                                                                                                                       >  1:1139732/1‑140 (MQ=255)

                tCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGgcgc                                                                                                                             <  2:258922/133‑1 (MQ=255)

                tCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGgcgc                                                                                                                             >  1:258922/1‑133 (MQ=255)

                tCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCaa                                                                                                                      >  1:703067/1‑140 (MQ=255)

                tCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCaa                                                                                                                      >  1:765792/1‑140 (MQ=255)

                tCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCaa                                                                                                                      <  1:803043/140‑1 (MQ=255)

                tCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCaa                                                                                                                      <  1:205223/140‑1 (MQ=255)

                tCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCaa                                                                                                                      >  2:1214568/1‑140 (MQ=255)

                tCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCaa                                                                                                                      >  2:205223/1‑140 (MQ=255)

                 cGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAac                                                                                                                     >  1:797885/1‑140 (MQ=255)

                  gaatgaatGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAaca                                                                                                                    <  2:459928/140‑1 (MQ=255)

                  gaatgaatGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAaca                                                                                                                    <  1:257627/140‑1 (MQ=255)

                  gaatgaatGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAaca                                                                                                                    <  2:365343/140‑1 (MQ=255)

                  gaatgaatGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAaca                                                                                                                    <  2:817221/140‑1 (MQ=255)

                   aatgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCaa                                                                                                                      <  1:298238/137‑1 (MQ=255)

                   aatgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCaa                                                                                                                      >  2:298238/1‑137 (MQ=255)

                   aatgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAacac                                                                                                                   >  2:801087/1‑140 (MQ=255)

                   aatgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAacac                                                                                                                   >  2:112948/1‑140 (MQ=255)

                          ggCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTAttt                                                                                                            >  1:300250/1‑140 (MQ=255)

                                 acaTCGAAACACAGGACGGAGTTATTCACGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGt                                                                                                     >  1:689665/1‑140 (MQ=255)

                                     cGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGcc                                                                                                 <  2:797885/140‑1 (MQ=255)

                                     cGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGcc                                                                                                 <  2:703067/140‑1 (MQ=255)

                                          cacaGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCaa                                                                                            <  2:1006998/140‑1 (MQ=255)

                                            caGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAAc                                                                                          <  1:145591/140‑1 (MQ=255)

                                             aGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACt                                                                                         >  2:1137060/1‑140 (MQ=255)

                                               gACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTa                                                                                       >  1:364515/1‑140 (MQ=255)

                                                aCGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTAt                                                                                      <  1:919478/140‑1 (MQ=255)

                                                  ggAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTg                                                                                    <  2:592073/140‑1 (MQ=255)

                                                  ggAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTg                                                                                    <  2:960708/140‑1 (MQ=255)

                                                      ttATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGa                                                                                <  1:488652/140‑1 (MQ=255)

                                                      ttATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGa                                                                                <  1:973326/140‑1 (MQ=255)

                                                        aTTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAAc                                                                              <  1:1137060/140‑1 (MQ=255)

                                                         ttCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACg                                                                             >  2:150566/1‑140 (MQ=255)

                                                         ttCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACg                                                                             >  2:169529/1‑140 (MQ=255)

                                                         ttCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACg                                                                             >  2:695340/1‑140 (MQ=255)

                                                           cAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAg                                                                           <  1:544923/140‑1 (MQ=255)

                                                             ggTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTa                                                                         <  2:835034/140‑1 (MQ=255)

                                                              gTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTaa                                                                        >  1:710567/1‑140 (MQ=255)

                                                              gTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTaa                                                                        <  1:1214568/140‑1 (MQ=255)

                                                              gTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTaa                                                                        >  1:1006459/1‑140 (MQ=255)

                                                                tAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATg                                                                      >  2:32353/1‑140 (MQ=255)

                                                                  aGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTc                                                                    >  2:468683/1‑140 (MQ=255)

                                                                   gCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCg                                                                   >  2:77079/1‑140 (MQ=255)

                                                                   gCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCg                                                                   >  2:1107159/1‑140 (MQ=255)

                                                                   gCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCg                                                                   >  1:1135184/1‑140 (MQ=255)

                                                                   gCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCg                                                                   <  1:468683/140‑1 (MQ=255)

                                                                   gCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCg                                                                   >  1:1017993/1‑140 (MQ=255)

                                                                        aaTTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAg                                                              <  1:32353/140‑1 (MQ=255)

                                                                                  cTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAgg                                                    <  2:830139/140‑1 (MQ=255)

                                                                                  cTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAgg                                                    <  2:300250/140‑1 (MQ=255)

                                                                                    aTTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCt                                                  <  2:1017993/140‑1 (MQ=255)

                                                                                    aTTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCt                                                  <  2:468721/140‑1 (MQ=255)

                                                                                    aTTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCt                                                  <  1:695340/140‑1 (MQ=255)

                                                                                    aTTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCt                                                  <  1:1107159/140‑1 (MQ=255)

                                                                                    aTTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCt                                                  <  1:150566/140‑1 (MQ=255)

                                                                                       aCAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGa                                               <  2:19542/140‑1 (MQ=255)

                                                                                           ccTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTaa                                           >  2:762621/1‑140 (MQ=255)

                                                                                           ccTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTaa                                           >  2:616522/1‑140 (MQ=255)

                                                                                           ccTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTaa                                           >  2:762626/1‑140 (MQ=255)

                                                                                            cTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTaaa                                          >  1:740871/1‑140 (MQ=255)

                                                                                             tCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAgg                                                    >  2:212064/1‑129 (MQ=255)

                                                                                             tCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAgg                                                    <  1:212064/129‑1 (MQ=255)

                                                                                               gCTTATAACAAACGCNGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATAc                                       >  1:919263/1‑140 (MQ=255)

                                                                                               gCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATAc                                       >  1:248025/1‑140 (MQ=255)

                                                                                               gCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATAc                                       >  2:29088/1‑140 (MQ=255)

                                                                                                     aaCAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGtt                                 >  2:750990/1‑140 (MQ=255)

                                                                                                       cAAACGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCg                               <  2:740871/140‑1 (MQ=255)

                                                                                                         aaCGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGaa                             <  2:308866/140‑1 (MQ=255)

                                                                                                         aaCGCGGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGaa                             >  1:423059/1‑140 (MQ=255)

                                                                                                            gcgGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGat                          <  1:750990/140‑1 (MQ=255)

                                                                                                             cgGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGata                         >  2:373326/1‑140 (MQ=255)

                                                                                                             cgGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGata                         >  1:232957/1‑140 (MQ=255)

                                                                                                             cgGGAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGata                         >  1:112403/1‑140 (MQ=255)

                                                                                                              gggAAATTACAACCCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCg                                   >  2:1108896/1‑129 (MQ=255)

                                                                                                              gggAAATTACAACCCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCg                                   <  1:1108896/129‑1 (MQ=255)

                                                                                                               ggAAATTACAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATc                       >  2:685042/1‑140 (MQ=255)

                                                                                                                      aCAACTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGa                <  1:77079/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  1:541695/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  2:961130/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  1:373326/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  2:621986/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  1:616522/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  2:423059/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  2:1135184/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  2:232957/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  2:1139732/140‑1 (MQ=255)

                                                                                                                          cTCACCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCt            <  2:178800/140‑1 (MQ=255)

                                                                                                                             aCCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACg              >  2:141160/1‑135 (MQ=255)

                                                                                                                             aCCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACg              <  1:141160/135‑1 (MQ=255)

                                                                                                                             aCCGTTACTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCTCAg         <  1:456420/140‑1 (MQ=255)

                                                                                                                                    cTCAGTAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCTCAGCTATAGc  >  1:697205/1‑140 (MQ=255)

CTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCTCAGCTATAGC  >  NC_000913/4546564‑4546835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`