Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,412,373	T→C	Y288C (TAC→TGC)	intR ←	Rac prophage; putative integrase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,412,373	0	T	C	100.0%	232.2 / NA	62	Y288C (TAC→TGC)	intR	Rac prophage; putative integrase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (26/36);  total (26/36)

TACCGAGTAATAAGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGTATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTTTCTTCTGACATTCACTATTCCCTTTTCGA  >  NC_000913/1412237‑1412502                                                                                                                                         |                                                                                                                                  tACCGAGTAATAAGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCAtt                                                                                                                                <  2:880884/140‑1 (MQ=255)   ccGAGTAATAAGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGc                                                                                                                              <  2:440149/140‑1 (MQ=255)         aataaGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTc                                                                                                                        >  1:1080007/1‑140 (MQ=255)         aataaGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTc                                                                                                                        >  1:699907/1‑140 (MQ=255)         aataaGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTc                                                                                                                        >  2:735391/1‑140 (MQ=255)          ataaGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCa                                                                                                                       <  1:669541/140‑1 (MQ=255)          ataaGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCa                                                                                                                       <  1:549480/140‑1 (MQ=255)            aaGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGt                                                                                                                     <  1:415010/140‑1 (MQ=255)              ggTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGc                                                                                                                   <  2:466032/140‑1 (MQ=255)                  tttGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCa                                                                                                               >  2:830831/1‑140 (MQ=255)                  tttGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCa                                                                                                               >  2:81198/1‑140 (MQ=255)                      ttttCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAagag                                                                                                           <  2:376099/140‑1 (MQ=255)                          ccGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAgg                                                                                                       <  1:195235/140‑1 (MQ=255)                             ttACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTg                                                                                                    <  1:172548/140‑1 (MQ=255)                              tACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGc                                                                                                   <  2:190394/140‑1 (MQ=255)                              tACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGc                                                                                                   <  1:685675/140‑1 (MQ=255)                              tACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGc                                                                                                   <  1:955528/140‑1 (MQ=255)                                cacacCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCag                                                                                                 <  1:225404/140‑1 (MQ=255)                                cacacCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCag                                                                                                 <  2:397542/140‑1 (MQ=255)                                   acCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCagtag                                                                                              <  1:342145/140‑1 (MQ=255)                                     ccTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAgg                                                                                                       >  1:621341/1‑129 (MQ=255)                                     ccTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAgg                                                                                                       <  2:621341/129‑1 (MQ=255)                                     ccTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCagtag                                                                                              >  2:23880/1‑138 (MQ=255)                                     ccTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCagtag                                                                                              <  1:23880/138‑1 (MQ=255)                                      cTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGTAGTAgtgt                                                                                           >  1:18610/1‑140 (MQ=255)                                      cTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAgtgt                                                                                           <  1:433548/140‑1 (MQ=255)                                       tGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGtt                                                                                          >  1:709285/1‑140 (MQ=255)                                       tGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGtt                                                                                          >  1:925356/1‑140 (MQ=255)                                        gggCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTa                                                                                         >  1:449414/1‑140 (MQ=255)                                        gggCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTa                                                                                         >  2:811494/1‑140 (MQ=255)                                         ggCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTAc                                                                                        >  1:1073939/1‑140 (MQ=255)                                          gCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACt                                                                                       >  2:417532/1‑140 (MQ=255)                                          gCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACt                                                                                       >  2:699168/1‑140 (MQ=255)                                              gAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTc                                                                                   >  2:931785/1‑140 (MQ=255)                                               aaaaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTAc                                                                                        >  1:360125/1‑134 (MQ=255)                                               aaaaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTAc                                                                                        <  2:360125/134‑1 (MQ=255)                                               aaaaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCg                                                                                  >  1:1016796/1‑140 (MQ=255)                                                                   cTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGTAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTg                                                              <  2:18610/140‑1 (MQ=255)                                                                     tttCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTggg                                                            <  2:1016796/140‑1 (MQ=255)                                                                     tttCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTggg                                                            <  1:81198/140‑1 (MQ=255)                                                                     tttCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTggg                                                            <  1:830831/140‑1 (MQ=255)                                                                       tCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTggggg                                                          >  2:1186766/1‑140 (MQ=255)                                                                       tCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTggggg                                                          >  2:50180/1‑140 (MQ=255)                                                                         ggTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTG‑‑CGGATCCCGGCATTTGTTTTTGGGGGACCg                                                      <  2:925356/140‑1 (MQ=255)                                                                            tCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGa                                                     <  1:867659/140‑1 (MQ=255)                                                                             cTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGaa                                                    <  2:449414/140‑1 (MQ=255)                                                                              tGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAAc                                                   <  1:735391/140‑1 (MQ=255)                                                                              tGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAAc                                                   <  2:709285/140‑1 (MQ=255)                                                                                     cTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCaa                                            >  1:655615/1‑140 (MQ=255)                                                                                            tgatAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGt                                     <  2:655615/140‑1 (MQ=255)                                                                                             gatAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCATGTATCGTc                                    >  2:352791/1‑140 (MQ=255)                                                                                             gatAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTc                                    >  1:388820/1‑140 (MQ=255)                                                                                                    ggTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCATGTATCGTCAGGTttc                             <  1:352791/140‑1 (MQ=255)                                                                                                       gATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTttcttc                          <  1:417532/140‑1 (MQ=255)                                                                                                       gATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTttcttc                          >  2:327153/1‑140 (MQ=255)                                                                                                       gATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTttcttc                          >  2:194031/1‑140 (MQ=255)                                                                                                        aTTTCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTTtcttct                         <  1:1186766/140‑1 (MQ=255)                                                                                                           tCGCTTTTGCGATGATGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTTTCTTCTGAc                      <  1:931785/140‑1 (MQ=255)                                                                                                                     gatgatGCCCGGTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTTTCTTCTGACATTCACTAtt            <  2:1073939/140‑1 (MQ=255)                                                                                                                               ggTCAGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTTTCTTCTGACATTCACTATTCCCTTTTCga  <  1:194031/140‑1 (MQ=255)                                                                                                                                   aGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTTTCTTCTGACATTCACTATTCCCTTTTCg   >  2:945576/1‑135 (MQ=255)                                                                                                                                   aGTTTGCATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTTTCTTCTGACATTCACTATTCCCTTTTCg   <  1:945576/135‑1 (MQ=255)                                                                                                                                         |                                                                                                                                  TACCGAGTAATAAGGTTTTTGTTTTCCGTTACACACCCTGGGCATGAAAACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCGATGATAAAAGGTGATTTCGCTTTTGCGATGATGCCCGGTCAGTTTGTATTGCTCCTTCAGTGCTTCAAGAGCAGGCTGCAGTAGTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGGTTTCTTCTGACATTCACTATTCCCTTTTCGA  >  NC_000913/1412237‑1412502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑