BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,992,892	T→C	Y267H (TAC→CAC)	ygeH →	putative transcriptional regulator YgeH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,992,892	0	T	C	100.0%	438.7 / NA	116	Y267H (TAC→CAC)	ygeH	putative transcriptional regulator YgeH
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (66/50); total (66/50)

Only 100 of 116 total aligned reads displayed.

TACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACT  >  NC_000913/2992756‑2993022

taCATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACg                                                                                                                                 >  1:1205398/1‑140 (MQ=255)

taCATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACg                                                                                                                                 >  1:164982/1‑140 (MQ=255)

   aTCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACt                                                                                                                              >  2:45198/1‑140 (MQ=255)

   aTCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACt                                                                                                                              >  1:633443/1‑140 (MQ=255)

   aTCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAAACAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACt                                                                                                                              >  1:397025/1‑140 (MQ=255)

     cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCAc                                                                                                                                  <  2:635320/134‑1 (MQ=255)

     cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCAc                                                                                                                                  >  1:635320/1‑134 (MQ=255)

     cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc                                                                                                                            >  1:103508/1‑140 (MQ=255)

     cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc                                                                                                                            >  2:645/1‑140 (MQ=255)

     cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc                                                                                                                            >  2:622587/1‑140 (MQ=255)

     cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc                                                                                                                            >  2:353366/1‑140 (MQ=255)

     cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc                                                                                                                            >  2:1129396/1‑140 (MQ=255)

     cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc                                                                                                                            >  1:838269/1‑140 (MQ=255)

     cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc                                                                                                                            >  1:804744/1‑140 (MQ=255)

       caATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCAc                                                                                                                          <  2:164982/140‑1 (MQ=255)

        aaTTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCAcc                                                                                                                         >  2:809219/1‑140 (MQ=255)

          tttATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCAcccc                                                                                                                       >  2:1121594/1‑140 (MQ=255)

             attatAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGa                                                                                                                    <  1:832315/140‑1 (MQ=255)

               tataGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGaaa                                                                                                                  >  2:586655/1‑140 (MQ=255)

               tataGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGaaa                                                                                                                  <  1:1121594/140‑1 (MQ=255)

                 taGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGc                                                                                                                <  1:143881/140‑1 (MQ=255)

                  aGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCa                                                                                                               >  1:932647/1‑140 (MQ=255)

                    ataataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACtt                                                                                                                             >  2:828205/1‑124 (MQ=255)

                    ataataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACtt                                                                                                                             <  1:828205/124‑1 (MQ=255)

                    ataataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCAtt                                                                                                             >  1:1053894/1‑140 (MQ=255)

                      aataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTa                                                                                                           >  1:988627/1‑140 (MQ=255)

                      aataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTa                                                                                                           >  1:669135/1‑140 (MQ=255)

                        tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTAc                                                                                                          >  2:922081/1‑139 (MQ=255)

                        tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTAc                                                                                                          <  1:922081/139‑1 (MQ=255)

                        tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa                                                                                                         <  1:688170/140‑1 (MQ=255)

                        tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa                                                                                                         <  1:830754/140‑1 (MQ=255)

                        tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa                                                                                                         >  2:431175/1‑140 (MQ=255)

                          tCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAgg                                                                                                       <  1:498063/140‑1 (MQ=255)

                            cTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGc                                                                                                     <  2:932647/140‑1 (MQ=255)

                            cTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGc                                                                                                     <  2:1205398/140‑1 (MQ=255)

                            cTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGc                                                                                                     <  2:772685/140‑1 (MQ=255)

                             ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTa                                                                                                           <  1:94606/133‑1 (MQ=255)

                             ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTa                                                                                                           >  2:94606/1‑133 (MQ=255)

                             ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc                                                                                                    >  2:1169296/1‑140 (MQ=255)

                             ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc                                                                                                    >  1:584932/1‑140 (MQ=255)

                             ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc                                                                                                    >  2:1073155/1‑140 (MQ=255)

                             ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc                                                                                                    <  2:1053894/140‑1 (MQ=255)

                             ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc                                                                                                    <  2:740428/140‑1 (MQ=255)

                             ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc                                                                                                    <  2:103508/140‑1 (MQ=255)

                              tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGa                                                                                                                    >  1:412532/1‑123 (MQ=255)

                              tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa                                                                                                   >  2:336032/1‑140 (MQ=255)

                              tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa                                                                                                   >  1:372525/1‑140 (MQ=255)

                              tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa                                                                                                   >  1:179651/1‑140 (MQ=255)

                              tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa                                                                                                   <  2:179651/140‑1 (MQ=255)

                              tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa                                                                                                   >  1:428839/1‑140 (MQ=255)

                               cAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTAc                                                                                                          <  2:1070579/132‑1 (MQ=255)

                               cAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTAc                                                                                                          >  1:1070579/1‑132 (MQ=255)

                               cAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCAt                                                                                                  <  1:250137/140‑1 (MQ=255)

                                 aaCGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGa                                                                                                <  1:336032/140‑1 (MQ=255)

                                 aaCGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGa                                                                                                <  1:1073155/140‑1 (MQ=255)

                                 aaCGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGa                                                                                                <  2:430153/140‑1 (MQ=255)

                                 aaCAGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGa                                                                                                <  2:309882/140‑1 (MQ=255)

                                   cGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACt                                                                                              <  1:586655/140‑1 (MQ=255)

                                       aCATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa                                                                                                         <  1:355704/125‑1 (MQ=255)

                                       aCATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa                                                                                                         >  2:355704/1‑125 (MQ=255)

                                       aCATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTatat                                                                                          >  1:746982/1‑140 (MQ=255)

                                                aGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGAt                                                                                 >  1:781349/1‑140 (MQ=255)

                                                aGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGAt                                                                                 >  2:1165120/1‑140 (MQ=255)

                                                  aaCGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTg                                                                                       >  1:244368/1‑132 (MQ=255)

                                                  aaCGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTg                                                                                       <  2:244368/132‑1 (MQ=255)

                                                  aaCGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTa                                                                               >  2:387091/1‑140 (MQ=255)

                                                  aaCGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTa                                                                               <  1:611252/140‑1 (MQ=255)

                                                       tCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACaaaa                                                                          >  1:459559/1‑140 (MQ=255)

                                                       tCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACaaaa                                                                          >  1:700221/1‑140 (MQ=255)

                                                       tCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACaaaa                                                                          >  2:1049829/1‑140 (MQ=255)

                                                        cTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAAt                                                                         <  1:1213942/140‑1 (MQ=255)

                                                          gTAAGATTAGCTAAGTAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaa                                                                       <  2:350629/140‑1 (MQ=255)

                                                          gTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaa                                                                       <  1:1129396/140‑1 (MQ=255)

                                                          gTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaa                                                                       <  1:809219/140‑1 (MQ=255)

                                                           tAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaaa                                                                      >  1:712805/1‑140 (MQ=255)

                                                            aaGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaaaa                                                                     <  1:45198/140‑1 (MQ=255)

                                                            aaGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaaaa                                                                     <  1:353366/140‑1 (MQ=255)

                                                               aTTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTg                                                                  <  2:633443/140‑1 (MQ=255)

                                                                 tAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGat                                                                >  2:577509/1‑140 (MQ=255)

                                                                   gCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGatat                                                              >  2:877223/1‑140 (MQ=255)

                                                                   gCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGatat                                                              >  2:708631/1‑140 (MQ=255)

                                                                         cAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGAc                                                        >  1:815075/1‑140 (MQ=255)

                                                                            gACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaa                                                                       >  1:29627/1‑122 (MQ=255)

                                                                            gACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCt                                                     <  2:45774/140‑1 (MQ=255)

                                                                                 aGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTaaaaa                                                >  2:1202460/1‑140 (MQ=255)

                                                                                      ataAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGaa                                           >  2:824366/1‑140 (MQ=255)

                                                                                             tCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTaaaaa                                                <  1:1037274/128‑1 (MQ=255)

                                                                                             tCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTaaaaa                                                >  2:1037274/1‑128 (MQ=255)

                                                                                             tCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTAtt                                    >  2:951187/1‑140 (MQ=255)

                                                                                                           aTGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGaa                      >  2:577959/1‑140 (MQ=255)

                                                                                                           aTGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGaa                      >  2:490865/1‑140 (MQ=255)

                                                                                                           aTGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGaa                      <  1:203266/140‑1 (MQ=255)

                                                                                                           aTGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGaa                      >  1:176587/1‑140 (MQ=255)

                                                                                                                     aGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGt            >  2:725253/1‑140 (MQ=255)

                                                                                                                     aGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGt            >  2:123320/1‑140 (MQ=255)

                                                                                                                      gCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTc           >  1:324520/1‑140 (MQ=255)

                                                                                                                           aaagaaagAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTgg      <  2:176587/140‑1 (MQ=255)

                                                                                                                           aaagaaagAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTgg      >  1:507150/1‑140 (MQ=255)

                                                                                                                            aagaaagaACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGc     >  2:295182/1‑140 (MQ=255)

                                                                                                                               aaagaaCTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACt  >  2:956310/1‑140 (MQ=255)

TACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACT  >  NC_000913/2992756‑2993022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`