Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,075,827 A→G V1019A (GTC→GCC)  putA ← fused DNA‑binding transcriptional repressor/proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase PutA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,075,8270AG98.6% 243.1 / ‑5.1 69V1019A (GTC→GCC) putAfused DNA‑binding transcriptional repressor/proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase PutA
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (33/35);  total (33/36)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGACCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGCATGGT  >  NC_000913/1075691‑1075963
                                                                                                                                        |                                                                                                                                        
aGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCct                                                                                                                                       <  2:350241/140‑1 (MQ=255)
        gggCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGc                                                                                                                               >  1:1047915/1‑140 (MQ=255)
         ggCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCa                                                                                                                              >  1:580143/1‑140 (MQ=255)
         ggCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCa                                                                                                                              >  2:474551/1‑140 (MQ=255)
              tGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCg                                                                                                                         >  1:908419/1‑140 (MQ=255)
                gTTTCATCATTGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGc                                                                                                                       >  2:547012/1‑140 (MQ=255)
                           gcgcGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCa                                                                                                            >  2:283697/1‑140 (MQ=255)
                             gcgTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGt                                                                                                          <  1:474551/140‑1 (MQ=255)
                                   ggACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATc                                                                                                    <  2:417782/140‑1 (MQ=255)
                                       gCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCGTCTTTTTACAATTCGGCAAAGTCATCCAGTTCGAGCAGCg                                                                                                >  2:960091/1‑140 (MQ=255)
                                                 aGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGAc                                                                                      <  1:305076/140‑1 (MQ=255)
                                                  gACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACa                                                                                     <  2:930073/140‑1 (MQ=255)
                                                            ggAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGc                                                                           <  2:908419/140‑1 (MQ=255)
                                                            ggAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGc                                                                           <  2:61889/140‑1 (MQ=255)
                                                              aaGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCg                                                                            <  2:533742/137‑1 (MQ=255)
                                                              aaGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCg                                                                            >  1:533742/1‑137 (MQ=255)
                                                               aGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCttt                                                                        >  1:327350/1‑140 (MQ=255)
                                                                 cGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGc                                                                      >  1:691209/1‑140 (MQ=255)
                                                                    tAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCAt                                                                   <  1:599842/140‑1 (MQ=255)
                                                                     aaTCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGAACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCAtt                                                                  <  2:1005229/140‑1 (MQ=255)
                                                                      aTCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGACCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTc                                                                 <  1:368914/140‑1 (MQ=255)
                                                                        cTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACg                                                              <  2:530961/140‑1 (MQ=255)
                                                                                 cAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCtt                                                      <  1:564681/140‑1 (MQ=255)
                                                                                   gCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCg                                                    <  1:642572/140‑1 (MQ=255)
                                                                                      ctGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTg                                                 <  2:580143/140‑1 (MQ=255)
                                                                                              tGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCg                                         >  2:929657/1‑140 (MQ=255)
                                                                                              tGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCg                                         >  2:804708/1‑140 (MQ=255)
                                                                                              tGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCg                                         >  1:477993/1‑140 (MQ=255)
                                                                                              tGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCg                                         >  2:781055/1‑140 (MQ=255)
                                                                                                gTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCa                                       <  2:327350/140‑1 (MQ=255)
                                                                                                gTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCa                                       <  2:42701/140‑1 (MQ=255)
                                                                                                gTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCa                                       <  1:547012/140‑1 (MQ=255)
                                                                                                gTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCa                                       <  1:368970/140‑1 (MQ=255)
                                                                                                 ttACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCa                                       >  1:610232/1‑139 (MQ=255)
                                                                                                 ttACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCa                                       <  2:610232/139‑1 (MQ=255)
                                                                                                 ttACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCAc                                      <  1:781055/140‑1 (MQ=255)
                                                                                                       ttGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTg                                >  2:670439/1‑140 (MQ=255)
                                                                                                        tGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTgg                               >  2:179599/1‑140 (MQ=255)
                                                                                                        tGTAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTgg                               >  2:363980/1‑140 (MQ=255)
                                                                                                          tAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGaa                             >  2:915700/1‑140 (MQ=255)
                                                                                                          tAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGaa                             >  2:650108/1‑140 (MQ=255)
                                                                                                          tAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGaa                             >  1:1054777/1‑140 (MQ=255)
                                                                                                          tAACGCACCACATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGaa                             >  1:379288/1‑140 (MQ=255)
                                                                                                               caccacATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCg                        >  2:883613/1‑140 (MQ=255)
                                                                                                                 ccacATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGa                      >  2:272386/1‑140 (MQ=255)
                                                                                                                 ccacATGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGa                      >  1:73486/1‑140 (MQ=255)
                                                                                                                     aTGCAGCACCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGc                  <  2:379288/140‑1 (MQ=255)
                                                                                                                       gcagcaCCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCt                <  2:73486/140‑1 (MQ=255)
                                                                                                                         agcaCCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCttt              >  1:343174/1‑140 (MQ=255)
                                                                                                                            aCCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCgg                       <  1:305754/128‑1 (MQ=255)
                                                                                                                            aCCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCgg                       >  2:305754/1‑128 (MQ=255)
                                                                                                                            aCCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCt           >  2:424965/1‑140 (MQ=255)
                                                                                                                            aCCGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCt           <  1:670439/140‑1 (MQ=255)
                                                                                                                             ccGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGcc                 <  2:361571/133‑1 (MQ=255)
                                                                                                                             ccGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGcc                 >  1:361571/1‑133 (MQ=255)
                                                                                                                              cGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCgg                       >  2:1065805/1‑126 (MQ=255)
                                                                                                                              cGGACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCgg                       <  1:1065805/126‑1 (MQ=255)
                                                                                                                               ggACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACg        <  2:691209/140‑1 (MQ=255)
                                                                                                                               ggACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACg        >  2:90474/1‑140 (MQ=255)
                                                                                                                                gACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGc       <  1:90474/140‑1 (MQ=255)
                                                                                                                                gACCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGc       >  1:507585/1‑140 (MQ=255)
                                                                                                                                 aCCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGCa      <  1:960091/140‑1 (MQ=255)
                                                                                                                                 aCCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGCa      <  2:1047915/140‑1 (MQ=255)
                                                                                                                                 aCCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGCa      <  2:343174/140‑1 (MQ=255)
                                                                                                                                 aCCAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGCa      <  1:272386/140‑1 (MQ=255)
                                                                                                                                   cAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGCATg    <  1:804708/140‑1 (MQ=255)
                                                                                                                                   cAAAGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGCATg    >  1:26527/1‑140 (MQ=255)
                                                                                                                                     aaGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCTGACGGCCTTTGCTACGCAt     <  2:175326/137‑1 (MQ=255)
                                                                                                                                     aaGGCCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGCATGGt  <  2:26527/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                        
AGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGATCAGCTCTGGTAGCTGGTTACGGTTGTAACGCACCACATGCAGCACCGGACCAAAGACCTCTTTTTGCAATTCGGCAAAGTCATCCAGTTCGATCAGCGTCGGGGCGACAAAGGTGCCGCTTTGCCATTCACGGGCATCTTCGCTGTTTTCCCGCACCGCCTGGAACACCGGACGGCCTTTGCTACGCATGGT  >  NC_000913/1075691‑1075963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: