BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,168,226	G→A	H7H (CAC→CAT)	mqsA ←	antitoxin of the MqsRA toxin‑antitoxin system/DNA‑binding transcriptional repressor MqsA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,168,226	0	G	A	100.0%	391.3 / NA	109	H7H (CAC→CAT)	mqsA	antitoxin of the MqsRA toxin‑antitoxin system/DNA‑binding transcriptional repressor MqsA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (57/52); total (57/52)

Only 100 of 109 total aligned reads displayed.

TCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATC  >  NC_000913/3168095‑3168358

tCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAAc                                                                                                                              >  1:655848/1‑140 (MQ=255)

tCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAAc                                                                                                                              >  1:861786/1‑140 (MQ=255)

    aCTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGa                                                                                                                          <  2:880609/140‑1 (MQ=255)

    aCTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGa                                                                                                                          <  2:700148/140‑1 (MQ=255)

      tcttctTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACa                                                                                                                        <  2:922836/140‑1 (MQ=255)

       cttcttTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACAt                                                                                                                       <  2:772025/140‑1 (MQ=255)

         tcttTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACAttt                                                                                                                     <  2:1034145/140‑1 (MQ=255)

           tttATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCa                                                                                                                   <  1:295427/140‑1 (MQ=255)

           tttATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCa                                                                                                                   <  1:245815/140‑1 (MQ=255)

                    gatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGTCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTtc                                                                                                          >  1:1063572/1‑140 (MQ=255)

                    gatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGa                                                                                                                          <  1:993543/124‑1 (MQ=255)

                    gatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCa                                                                                                                   <  2:314073/131‑1 (MQ=255)

                    gatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCa                                                                                                                   >  1:314073/1‑131 (MQ=255)

                    gatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTtc                                                                                                          >  2:62536/1‑140 (MQ=255)

                    gatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTtc                                                                                                          >  1:136376/1‑140 (MQ=255)

                    gatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTtc                                                                                                          >  1:104253/1‑140 (MQ=255)

                         tctctTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCtt                                                                                                     >  2:200769/1‑140 (MQ=255)

                            ctTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTaaa                                                                                                  >  2:175951/1‑140 (MQ=255)

                             ttCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAAc                                                                                                 <  1:131373/140‑1 (MQ=255)

                              tCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACg                                                                                                <  2:806371/140‑1 (MQ=255)

                               cGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACga                                                                                               <  2:820383/140‑1 (MQ=255)

                                gCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACgag                                                                                              <  2:861786/140‑1 (MQ=255)

                                gCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACgag                                                                                              <  1:354025/140‑1 (MQ=255)

                                  aaTGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGAc                                                                                            >  1:712185/1‑140 (MQ=255)

                                  aaTGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGAc                                                                                            <  2:104253/140‑1 (MQ=255)

                                     ggACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGAt                                                                                         >  2:176165/1‑140 (MQ=255)

                                       acacAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACg                                                                                                <  2:724195/131‑1 (MQ=255)

                                       acacAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACg                                                                                                >  1:724195/1‑131 (MQ=255)

                                       acacAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCa                                                                                       >  1:59105/1‑140 (MQ=255)

                                       acacAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCa                                                                                       >  2:636808/1‑140 (MQ=255)

                                        cacaATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAg                                                                                      <  1:58282/140‑1 (MQ=255)

                                          caATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTa                                                                                    <  1:176165/140‑1 (MQ=255)

                                            atatAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAGTGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACACTTCATATTACTTCTCCTTAAACGAGACGATCAGTACg                                                                                  >  2:407686/1‑140 (MQ=255)

                                                aaaCCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTc                                                                                <  2:533822/138‑1 (MQ=255)

                                                aaaCCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTc                                                                                >  1:533822/1‑138 (MQ=255)

                                                aaaCCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCAt                                                                              >  1:525409/1‑140 (MQ=255)

                                                     gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGt                                                                                     <  1:664736/128‑1 (MQ=255)

                                                     gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGt                                                                                     >  2:664736/1‑128 (MQ=255)

                                                     gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGt                                                                                     <  1:849485/128‑1 (MQ=255)

                                                     gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGt                                                                                     >  2:849485/1‑128 (MQ=255)

                                                     gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAAtt                                                                         >  1:615689/1‑140 (MQ=255)

                                                     gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAAtt                                                                         >  1:373836/1‑140 (MQ=255)

                                                     gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATACCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAAtt                                                                         >  2:1049666/1‑140 (MQ=255)

                                                      tGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTa                                                                        >  1:961511/1‑140 (MQ=255)

                                                       ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGTATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTAc                                                                       >  1:49393/1‑140 (MQ=255)

                                                       ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTAc                                                                       >  1:187707/1‑140 (MQ=255)

                                                       ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTAc                                                                       >  2:23763/1‑140 (MQ=255)

                                                       ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTAc                                                                       >  2:466115/1‑140 (MQ=255)

                                                       ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTAc                                                                       >  2:134527/1‑140 (MQ=255)

                                                       ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTAc                                                                       >  2:472811/1‑140 (MQ=255)

                                                       ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTAc                                                                       >  2:873971/1‑140 (MQ=255)

                                                        gATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTAcc                                                                      >  2:1083673/1‑140 (MQ=255)

                                                              tttCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAAtt                                                                >  2:1028782/1‑140 (MQ=255)

                                                                  aaTACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTaa                                                            <  1:259893/140‑1 (MQ=255)

                                                                   aTACTGTTTTTCGTCCACGGAAGGTGTATGGTATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAg                                                           <  2:49393/140‑1 (MQ=255)

                                                                    tACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGTCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGa                                                          <  2:1063572/140‑1 (MQ=255)

                                                                    tACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGa                                                          <  1:134527/140‑1 (MQ=255)

                                                                    tACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGa                                                          <  1:200769/140‑1 (MQ=255)

                                                                        gTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATaaa                                                      >  1:377137/1‑140 (MQ=255)

                                                                         tttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAAc                                                     >  1:418028/1‑140 (MQ=255)

                                                                         tttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAAc                                                     <  1:472811/140‑1 (MQ=255)

                                                                         tttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAAc                                                     >  1:512654/1‑140 (MQ=255)

                                                                         tttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAAc                                                     <  1:265375/140‑1 (MQ=255)

                                                                         tttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAAc                                                     >  2:80208/1‑140 (MQ=255)

                                                                          ttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAAcc                                                    <  1:271438/140‑1 (MQ=255)

                                                                               gTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGcc                                               <  1:1028782/140‑1 (MQ=255)

                                                                                 ccACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTg                                             >  2:765895/1‑140 (MQ=255)

                                                                                  cACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGt                                            >  1:712837/1‑140 (MQ=255)

                                                                                    cGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTaa                                          <  2:418028/140‑1 (MQ=255)

                                                                                     ggAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAAc                                         <  1:777593/140‑1 (MQ=255)

                                                                                          gtgtATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGcc                                    <  2:713465/140‑1 (MQ=255)

                                                                                                    tatCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTa                          >  2:85536/1‑140 (MQ=255)

                                                                                                     atCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTaa                         >  2:252989/1‑140 (MQ=255)

                                                                                                     atCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTaa                         >  1:922639/1‑140 (MQ=255)

                                                                                                     atCTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTaa                         >  2:876506/1‑140 (MQ=255)

                                                                                                       cTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAAc                                         <  2:245642/122‑1 (MQ=255)

                                                                                                       cTTTAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAAc                                         >  1:245642/1‑122 (MQ=255)

                                                                                                        tttAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACa                      <  1:85536/140‑1 (MQ=255)

                                                                                                        tttAATGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACa                      <  1:876506/140‑1 (MQ=255)

                                                                                                            aTGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGt                               <  1:1003434/127‑1 (MQ=255)

                                                                                                            aTGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGt                               >  2:1003434/1‑127 (MQ=255)

                                                                                                            aTGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACa                      <  2:116658/136‑1 (MQ=255)

                                                                                                            aTGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACa                      >  1:428858/1‑136 (MQ=255)

                                                                                                            aTGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACa                      >  1:116658/1‑136 (MQ=255)

                                                                                                            aTGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACa                      <  2:428858/136‑1 (MQ=255)

                                                                                                            aTGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCt                  <  1:252989/140‑1 (MQ=255)

                                                                                                            aTGCCAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCt                  >  2:241564/1‑140 (MQ=255)

                                                                                                               ccAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGcc               <  2:377137/140‑1 (MQ=255)

                                                                                                               ccAGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGcc               <  1:765895/140‑1 (MQ=255)

                                                                                                                 aGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAg             <  2:385495/140‑1 (MQ=255)

                                                                                                                 aGAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAg             <  2:373836/140‑1 (MQ=255)

                                                                                                                  gAAACCATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGa            >  2:1027170/1‑140 (MQ=255)

                                                                                                                      ccATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGt        <  1:62536/140‑1 (MQ=255)

                                                                                                                      ccATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGt        <  2:136376/140‑1 (MQ=255)

                                                                                                                      ccATTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGt        <  2:922639/140‑1 (MQ=255)

                                                                                                                        aTTTCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTAt      >  2:641163/1‑140 (MQ=255)

                                                                                                                         tttCTCCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATg     >  2:20863/1‑140 (MQ=255)

                                                                                                                           tctcCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGAt   <  1:175951/140‑1 (MQ=255)

                                                                                                                           tctcCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGAt   <  2:700988/140‑1 (MQ=255)

                                                                                                                            ctcCCTGATGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATc  <  2:655848/140‑1 (MQ=255)

TCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATC  >  NC_000913/3168095‑3168358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`