Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 932,991 (G)5→6 coding (397/495 nt) lrp → DNA‑binding transcriptional dual regulator Lrp

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913932,9861.G100.0% 160.5 / NA 44L131R (CTG→CGG) lrpDNA‑binding transcriptional dual regulator Lrp
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (21/23);  total (21/23)

GGCGCACCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCT‑GGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACGCGCTAACACGGAACAGGTGCAAAATCGGCGTA  >  NC_000913/932847‑933115
                                                                                                                                            |                                                                                                                                 
ggCGCACCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCt                                                                                                                                    <  2:211951/140‑1 (MQ=255)
 gcgcACCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCT‑g                                                                                                                                  <  2:668627/140‑1 (MQ=255)
      ccGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCT‑gggggg                                                                                                                             <  1:798148/140‑2 (MQ=255)
                   aaCAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCg                                                                                                                 >  1:511758/1‑140 (MQ=255)
                       aTTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTg                                                                                                             >  2:112153/1‑140 (MQ=255)
                       aTTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGACTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTg                                                                                                             >  2:724497/1‑140 (MQ=255)
                        ttCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGc                                                                                                            <  1:290197/140‑1 (MQ=255)
                        ttCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGc                                                                                                            <  2:508771/140‑1 (MQ=255)
                         tCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGcc                                                                                                           >  1:671589/1‑140 (MQ=255)
                           aaTACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCatg                                                                                                                      >  2:598253/1‑127 (MQ=255)
                           aaTACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCatg                                                                                                                      <  1:598253/127‑1 (MQ=255)
                           aaTACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTg                                                                                                         <  2:53356/140‑1 (MQ=255)
                           aaTACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTg                                                                                                         <  1:606770/140‑1 (MQ=255)
                                cGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTc                                                                                                    >  2:416418/1‑140 (MQ=255)
                                  cTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCaa                                                                                                  >  2:498670/1‑140 (MQ=255)
                                   tGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAAt                                                                                                 <  1:127585/140‑1 (MQ=255)
                                       cAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGaca                                                                                             <  1:112153/140‑1 (MQ=255)
                                         aaaaCTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGacaca                                                                                           <  1:544889/140‑1 (MQ=255)
                                           aaCTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACg                                                                                         <  1:479847/140‑1 (MQ=255)
                                             cTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGa                                                                                       <  1:679792/140‑1 (MQ=255)
                                               tGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACa                                                                                     >  2:583565/1‑140 (MQ=255)
                                                   gaaATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACg                                                                                 <  1:583565/140‑1 (MQ=255)
                                                   gaaATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACg                                                                                 <  1:498670/140‑1 (MQ=255)
                                                    aaaTTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACgt                                                                                <  2:811508/140‑1 (MQ=255)
                                                                 tCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGgaagaa                                                                   >  1:745350/1‑140 (MQ=255)
                                                                       aGTGTCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAg                                                             <  2:397979/140‑1 (MQ=255)
                                                                         tATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGga                                                                       >  1:717909/1‑128 (MQ=255)
                                                                         tATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGga                                                                       <  2:717909/128‑1 (MQ=255)
                                                                         tATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAg                                                             >  1:346954/1‑138 (MQ=255)
                                                                         tATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAg                                                             <  2:346954/138‑1 (MQ=255)
                                                                         tATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCa                                                           >  1:739846/1‑140 (MQ=255)
                                                                         tATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCa                                                           >  1:602723/1‑140 (MQ=255)
                                                                           tCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGTCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCaga                                                         >  1:195825/1‑140 (MQ=255)
                                                                           tCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCaga                                                         >  1:590014/1‑140 (MQ=255)
                                                                            ccGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCagag                                                        >  1:43208/1‑140 (MQ=255)
                                                                               gTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTaa                                                     <  2:739846/140‑1 (MQ=255)
                                                                                   tttCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGt                                                 <  2:261961/140‑1 (MQ=255)
                                                                                     tCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCt                                               >  2:595259/1‑140 (MQ=255)
                                                                                               gTTGAAAACAAGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACCCGGACATACGTTGTTATGGAAGAAGTCAAACAGAGTAATCGTCTGGTTATTAAg                                     <  2:533390/140‑1 (MQ=255)
                                                                                                    aaaCACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGAcgcg                                <  2:671589/140‑1 (MQ=255)
                                                                                                     aaCACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACgcgc                               <  2:511758/140‑1 (MQ=255)
                                                                                                     aaCACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACgcgc                               <  1:467267/140‑1 (MQ=255)
                                                                                                             tGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTGTTAAGACGCGCTAACACgg                       >  2:431344/1‑140 (MQ=255)
                                                                                                               ccGGATATGTCAGTCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACGCGCTAACACGGaa                     <  2:195825/140‑1 (MQ=255)
                                                                                                               ccGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACGCGCTAACACGGaa                     >  1:328385/1‑140 (MQ=255)
                                                                                                                cGGATATGTCAGCCTACCGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACGCGCTAACACGGAAc                    <  1:416418/140‑1 (MQ=255)
                                                                                                                                 cGTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACGCGCTAACACGGAACAGGTGCAAAATCGGCGt   >  1:665060/1‑140 (MQ=255)
                                                                                                                                  gTAAGTTGCTGGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACGCGCTAACACGGAACAGGTGCAAAATCGGCGTa  >  1:617799/1‑140 (MQ=255)
                                                                                                                                            |                                                                                                                                 
GGCGCACCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCT‑GGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACGCGCTAACACGGAACAGGTGCAAAATCGGCGTA  >  NC_000913/932847‑933115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑