BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	292,991	A→G	intergenic (‑43/+229)	yagK ← / ← yagL	CP4‑6 prophage; uncharacterized protein YagK/CP4‑6 prophage; resolvase‑like catalytic domain‑containing protein YagL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	292,991	0	A	G	100.0%	426.3 / NA	114	intergenic (‑43/+229)	yagK/yagL	CP4‑6 prophage; uncharacterized protein YagK/CP4‑6 prophage; resolvase‑like catalytic domain‑containing protein YagL
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (52/62); total (52/62)

Only 100 of 114 total aligned reads displayed.

AGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCAT  >  NC_000913/292856‑293126

aGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAgg                                                                                                                                     >  1:443399/1‑140 (MQ=255)

aGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAgg                                                                                                                                     >  1:215180/1‑140 (MQ=255)

 ggATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAggg                                                                                                                                    <  1:476380/140‑1 (MQ=255)

       cGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAg                                                                                                                                      >  2:682254/1‑132 (MQ=255)

       cGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAg                                                                                                                                      <  1:682254/132‑1 (MQ=255)

       cGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCa                                                                                                                              >  1:664678/1‑140 (MQ=255)

       cGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCa                                                                                                                              >  1:27351/1‑140 (MQ=255)

            aGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATAcag                                                                                                                         >  1:162061/1‑140 (MQ=255)

             gTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATAcagg                                                                                                                        <  2:841255/140‑1 (MQ=255)

             gTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATAcagg                                                                                                                        <  2:443399/140‑1 (MQ=255)

                                     aTCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACtgttg                                                                                                <  2:557506/140‑1 (MQ=255)

                                     aTCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACtgttg                                                                                                <  1:487981/140‑1 (MQ=255)

                                        ttACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCg                                                                                             <  2:563338/140‑1 (MQ=255)

                                          aCTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGt                                                                                           <  1:729152/140‑1 (MQ=255)

                                                atatTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCa                                                                                                      >  2:672123/1‑123 (MQ=255)

                                                atatTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACtgttgt                                                                                               <  2:610035/130‑1 (MQ=255)

                                                atatTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACtgttgt                                                                                               >  1:610035/1‑130 (MQ=255)

                                                atatTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACtgttg                                                                                                >  1:429349/1‑129 (MQ=255)

                                                atatTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACtgttg                                                                                                <  2:429349/129‑1 (MQ=255)

                                                atatTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATAc                                                                                     >  2:251482/1‑140 (MQ=255)

                                                atatTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATAc                                                                                     >  2:105542/1‑140 (MQ=255)

                                                atatTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATAc                                                                                     >  1:185071/1‑140 (MQ=255)

                                                     cGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACtgttg                                                                                                >  2:351623/1‑124 (MQ=255)

                                                     cGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACtgttg                                                                                                <  1:351623/124‑1 (MQ=255)

                                                         gATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAg                                                                            <  2:162061/140‑1 (MQ=255)

                                                             tGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGAttt                                                                        >  2:295171/1‑140 (MQ=255)

                                                             tGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGAttt                                                                        >  1:134154/1‑140 (MQ=255)

                                                                 cTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGt                                                                    <  1:295171/140‑1 (MQ=255)

                                                                  tCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTa                                                                   >  1:457353/1‑140 (MQ=255)

                                                                    cATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTa                                                                   >  2:480141/1‑138 (MQ=255)

                                                                    cATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTa                                                                   <  1:480141/138‑1 (MQ=255)

                                                                    cATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACg                                                                 >  1:462162/1‑140 (MQ=255)

                                                                     aTGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACgg                                                                <  1:620911/140‑1 (MQ=255)

                                                                      tGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGa                                                               >  2:137358/1‑140 (MQ=255)

                                                                         gTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACAt                                                            >  2:567611/1‑140 (MQ=255)

                                                                         gTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACAt                                                            >  2:225952/1‑140 (MQ=255)

                                                                          tACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATa                                                           <  1:567611/140‑1 (MQ=255)

                                                                          tACCTTGATATGTTTTCATAATATATACCTGTATTTGGTACTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATa                                                           <  2:221853/140‑1 (MQ=255)

                                                                            ccTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACgg                                                                <  2:109653/133‑1 (MQ=255)

                                                                            ccTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACgg                                                                >  1:109653/1‑133 (MQ=255)

                                                                            ccTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATGct                                                         <  2:505097/140‑1 (MQ=255)

                                                                               tGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATActgat                                                      <  2:358417/140‑1 (MQ=255)

                                                                                gATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATActgatc                                                     >  2:643435/1‑140 (MQ=255)

                                                                                 atatGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATActgatct                                                    <  2:215180/140‑1 (MQ=255)

                                                                                    tGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACgg                                                                <  2:820198/125‑1 (MQ=255)

                                                                                    tGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACgg                                                                >  1:820198/1‑125 (MQ=255)

                                                                                    tGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATActgatctgat                                                 >  1:651564/1‑140 (MQ=255)

                                                                                     gTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGAtt                                                <  1:105542/140‑1 (MQ=255)

                                                                                      ttttCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATActgat                                                      >  1:428432/1‑133 (MQ=255)

                                                                                      ttttCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATActgat                                                      <  2:428432/133‑1 (MQ=255)

                                                                                       tttCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATtac                                              >  2:50488/1‑140 (MQ=255)

                                                                                        ttCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATtact                                             <  1:137358/140‑1 (MQ=255)

                                                                                           ataataTATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTactact                                          >  1:224374/1‑140 (MQ=255)

                                                                                           ataataTATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTactact                                          >  1:242480/1‑140 (MQ=255)

                                                                                                       tGTATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGaa                              <  1:225952/140‑1 (MQ=255)

                                                                                                         tATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATa                            >  2:762453/1‑140 (MQ=255)

                                                                                                         tATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATa                            >  2:260183/1‑140 (MQ=255)

                                                                                                         tATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATa                            <  2:651564/140‑1 (MQ=255)

                                                                                                         tATTTGGTCCTACGGTCTATAGCAGACCGTGCAGGGAGGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATa                            >  2:763382/1‑140 (MQ=255)

                                                                                                         tATTTGGTCCTACGGTCTATAGCAGACCGAGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTactact                                          <  2:699697/126‑1 (MQ=255)

                                                                                                         tATTTGGTCCTACGGTCTATAGCAGACCGAGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTactact                                          >  1:699697/1‑126 (MQ=255)

                                                                                                           tttGGTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACa                          >  1:424035/1‑140 (MQ=255)

                                                                                                              ggTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgt                       >  2:461866/1‑140 (MQ=255)

                                                                                                              ggTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgt                       >  2:151782/1‑140 (MQ=255)

                                                                                                              ggTCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgt                       <  2:424035/140‑1 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTa                                      <  1:16006/123‑1 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTa                                      >  2:16006/1‑123 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtag                     >  2:784353/1‑140 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtag                     >  1:310974/1‑140 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtag                     <  1:608467/140‑1 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtag                     >  2:441749/1‑140 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtag                     <  2:664678/140‑1 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtag                     <  2:147734/140‑1 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtag                     <  2:738395/140‑1 (MQ=255)

                                                                                                                tCCTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGGCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtag                     >  1:738395/1‑140 (MQ=255)

                                                                                                                 ccTACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtagt                    <  1:260183/140‑1 (MQ=255)

                                                                                                                   tACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTaa                  <  1:461866/140‑1 (MQ=255)

                                                                                                                   tACGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTaa                  <  1:762453/140‑1 (MQ=255)

                                                                                                                     cGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACa                          <  2:432794/130‑1 (MQ=255)

                                                                                                                     cGGTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACa                          >  1:432794/1‑130 (MQ=255)

                                                                                                                       gTCTATAGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGt              <  1:441749/140‑1 (MQ=255)

                                                                                                                             aGCAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACaa        <  1:151782/140‑1 (MQ=255)

                                                                                                                               cAGACCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATg      <  1:643435/140‑1 (MQ=255)

                                                                                                                                  aCCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtagt                    <  1:418721/123‑1 (MQ=255)

                                                                                                                                  aCCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgtagt                    >  2:418721/1‑123 (MQ=255)

                                                                                                                                  aCCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCa   <  1:791487/140‑1 (MQ=255)

                                                                                                                                  aCCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCa   <  1:50488/140‑1 (MQ=255)

                                                                                                                                  aCCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCa   <  1:3437/140‑1 (MQ=255)

                                                                                                                                  aCCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCa   <  2:310974/140‑1 (MQ=255)

                                                                                                                                  aCCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCa   <  2:291230/140‑1 (MQ=255)

                                                                                                                                  aCCGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCa   <  2:185071/140‑1 (MQ=255)

                                                                                                                                   ccGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCAt  <  1:251482/140‑1 (MQ=255)

                                                                                                                                   ccGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCAt  <  2:224374/140‑1 (MQ=255)

                                                                                                                                   ccGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCAt  <  2:835282/140‑1 (MQ=255)

                                                                                                                                   ccGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCAt  <  2:242480/140‑1 (MQ=255)

                                                                                                                                    cGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACaa        >  2:547686/1‑133 (MQ=255)

                                                                                                                                    cGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACaa        <  1:547686/133‑1 (MQ=255)

                                                                                                                                    cGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCa   <  1:345243/138‑1 (MQ=255)

                                                                                                                                    cGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCAt  <  2:358524/139‑1 (MQ=255)

                                                                                                                                    cGTGCAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCAt  >  1:358524/1‑139 (MQ=255)

AGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCAT  >  NC_000913/292856‑293126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`