BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,067,883	(T)_7→8	intergenic (‑175/‑198)	wrbA ← / → ymdF	NAD(P)H:quinone oxidoreductase/conserved protein YmdF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,067,876	1	.	T	100.0%	256.8 / NA	75	intergenic (‑168/‑205)	wrbA/ymdF	NAD(P)H:quinone oxidoreductase/conserved protein YmdF
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (28/47); total (28/47)

Only 100 of 102 total aligned reads displayed.

CGTAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCTTAGTCCCACGTAGCGAA  >  NC_000913/1067739‑1068010

cGTAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tt                                                                                                                                      >  1:460815/1‑140 (MQ=255)

cGTAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tt                                                                                                                                      >  2:866016/1‑140 (MQ=255)

 gTAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑ttt                                                                                                                                     >  1:1191954/1‑140 (MQ=255)

  tAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACGTTTTTATCTCATCGCG‑‑tttt                                                                                                                                    >  2:280249/1‑140 (MQ=255)

  tAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttt                                                                                                                                    >  1:1469357/1‑140 (MQ=255)

  tAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttt                                                                                                                                    >  1:482419/1‑140 (MQ=255)

  tAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttt                                                                                                                                    >  1:892460/1‑140 (MQ=255)

  tAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttt                                                                                                                                    >  1:1578450/1‑140 (MQ=255)

  tAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttt                                                                                                                                    >  2:302710/1‑140 (MQ=255)

  tAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttt                                                                                                                                    >  1:1334811/1‑140 (MQ=255)

  tAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttt                                                                                                                                    >  2:510918/1‑140 (MQ=255)

    gCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttt                                                                                                                                  <  1:1246826/140‑1 (MQ=255)

    gCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttt                                                                                                                                  <  2:1477770/140‑1 (MQ=255)

    gCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttt                                                                                                                                  <  2:1010487/140‑1 (MQ=255)

     cGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑ttttttt                                                                                                                                 >  2:507417/1‑140 (MQ=255)

     cGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑ttttttt                                                                                                                                 >  1:697827/1‑140 (MQ=255)

     cGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑ttttttt                                                                                                                                 >  1:787945/1‑140 (MQ=255)

      gATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttttt                                                                                                                                <  1:1440456/140‑2 (MQ=255)

       aTTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAATCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttttta                                                                                                                               >  2:714167/1‑138 (MQ=255)

       aTTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttttta                                                                                                                               >  1:1525342/1‑138 (MQ=255)

       aTTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttttta                                                                                                                               >  1:956042/1‑138 (MQ=255)

       aTTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttttta                                                                                                                               >  1:1599992/1‑138 (MQ=255)

       aTTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttttta                                                                                                                               <  1:174051/140‑3 (MQ=255)

       aTTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑tttttttta                                                                                                                               <  1:1434613/140‑3 (MQ=255)

         tCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑ttttttttaat                                                                                                                             <  2:956042/140‑5 (MQ=255)

         tCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑ttttttttaat                                                                                                                             <  1:1030816/140‑5 (MQ=255)

                  cTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGc                                                                                                                     >  1:1583330/1‑140 (MQ=255)

                      tttAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCt                                                                                                                 <  1:419184/140‑1 (MQ=255)

                       ttAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCtt                                                                                                                <  1:1511733/140‑1 (MQ=255)

                           aGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATgg                                                                                                            <  1:227798/140‑1 (MQ=255)

                           aGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATgg                                                                                                            >  2:530366/1‑140 (MQ=255)

                            gATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGa                                                                                                           >  1:532204/1‑140 (MQ=255)

                             aTAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGTTTTTTTTTAATCATAAGAGCGGCTTATGGa                                                                                                           <  1:1194631/140‑1 (MQ=255)

                             aTAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGAt                                                                                                          >  2:1230129/1‑140 (MQ=255)

                               aaGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATaa                                                                                                        <  1:28306/140‑1 (MQ=255)

                                aGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAat                                                                                                       >  2:381626/1‑140 (MQ=255)

                                aGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAat                                                                                                       >  2:1253728/1‑140 (MQ=255)

                                 gACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAatt                                                                                                      >  2:1115133/1‑140 (MQ=255)

                                     tCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTg                                                                                                  >  2:377082/1‑140 (MQ=255)

                                     tCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTg                                                                                                  <  1:1311800/140‑1 (MQ=255)

                                     tCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTg                                                                                                  >  2:694805/1‑140 (MQ=255)

                                     tCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTg                                                                                                  <  2:1150575/140‑1 (MQ=255)

                                      ccTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTgg                                                                                                 >  2:73245/1‑140 (MQ=255)

                                       cTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGga                                                                                                >  1:418467/1‑140 (MQ=255)

                                       cTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGga                                                                                                <  2:888777/140‑1 (MQ=255)

                                       cTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGga                                                                                                >  1:521359/1‑140 (MQ=255)

                                          ttCAGAGTGCAAATTTCACACCCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAgat                                                                                             <  2:486102/140‑1 (MQ=255)

                                          ttCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAgat                                                                                             <  2:1583330/140‑1 (MQ=255)

                                          ttCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAgat                                                                                             <  1:530366/140‑1 (MQ=255)

                                          ttCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCAGCTTATGGATAATTATTGGAgat                                                                                             <  2:1284250/140‑1 (MQ=255)

                                           tCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAgatg                                                                                            <  1:1426314/140‑1 (MQ=255)

                                           tCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAgatg                                                                                            <  2:902811/140‑1 (MQ=255)

                                               agTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGatat                                                                                        >  1:468830/1‑140 (MQ=255)

                                                    aaaTTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTAtt                                                                                   <  2:697827/140‑1 (MQ=255)

                                                     aaTTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATtc                                                                                  <  2:1599992/140‑1 (MQ=255)

                                                        ttCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCg                                                                               <  1:1387678/140‑1 (MQ=255)

                                                                cACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTaagaag                                                                       <  1:1622740/140‑1 (MQ=255)

                                                                 aCTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGc                                                                      <  2:892460/140‑1 (MQ=255)

                                                                 aCTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGc                                                                      <  2:1578450/140‑1 (MQ=255)

                                                                  cTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCt                                                                     >  2:278052/1‑140 (MQ=255)

                                                                      tttGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTg                                                                 <  1:47965/140‑1 (MQ=255)

                                                                      tttGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTg                                                                 <  1:110997/140‑1 (MQ=255)

                                                                       ttGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGc                                                                <  2:898373/140‑1 (MQ=255)

                                                                       ttGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGc                                                                <  2:1309804/140‑1 (MQ=255)

                                                                        tGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACGTTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCa                                                               <  1:280249/140‑1 (MQ=255)

                                                                        tGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCa                                                               <  2:1334811/140‑1 (MQ=255)

                                                                        tGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCa                                                               <  1:553399/140‑1 (MQ=255)

                                                                          aTTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGTTATCTATTCTCGCTAAGAAGCTGTTGCAgg                                                             >  2:1318820/1‑140 (MQ=255)

                                                                          aTTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAgg                                                             <  2:185936/140‑1 (MQ=255)

                                                                             tataACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGata                                                          >  1:705044/1‑140 (MQ=255)

                                                                             tataACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGata                                                          <  1:1253728/140‑1 (MQ=255)

                                                                             tataACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGata                                                          >  2:471817/1‑140 (MQ=255)

                                                                             tataACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGata                                                          >  2:1478802/1‑140 (MQ=255)

                                                                               taACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATAtt                                                        >  2:168259/1‑140 (MQ=255)

                                                                                 acaacTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTAc                                                      <  2:482419/140‑1 (MQ=255)

                                                                                     cTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCaaa                                                  >  1:1548182/1‑140 (MQ=255)

                                                                                       ttCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAAcg                                                <  1:820710/140‑1 (MQ=255)

                                                                                        tCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAAcgc                                               >  2:236007/1‑140 (MQ=255)

                                                                                            aaGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGt                                           <  2:1585482/140‑1 (MQ=255)

                                                                                                aCGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGc                                       >  1:351185/1‑140 (MQ=255)

                                                                                                   tAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCcg                                    <  2:787945/140‑1 (MQ=255)

                                                                                                   tAATTTCGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCcg                                    <  2:1191954/140‑1 (MQ=255)

                                                                                                     aTTTTGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCcgcg                                  <  2:532204/140‑1 (MQ=255)

                                                                                                        ttGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCa                               <  1:480825/140‑1 (MQ=255)

                                                                                                         tGTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAg                              >  2:389533/1‑140 (MQ=255)

                                                                                                          gTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGt                             <  2:460815/140‑1 (MQ=255)

                                                                                                          gTCGCAAAATGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGt                             <  1:514512/140‑1 (MQ=255)

                                                                                                             gCAAAATGACACATTTTTACCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCa                          <  1:1230129/140‑1 (MQ=255)

                                                                                                               aaaaTGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACt                        <  1:73245/140‑1 (MQ=255)

                                                                                                               aaaaTGACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACt                        <  1:169050/140‑1 (MQ=255)

                                                                                                                    gACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCt                   <  1:794116/140‑1 (MQ=255)

                                                                                                                    gACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCt                   <  2:537337/140‑1 (MQ=255)

                                                                                                                    gACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCt                   <  1:496711/140‑1 (MQ=255)

                                                                                                                    gACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCt                   <  1:507417/140‑1 (MQ=255)

                                                                                                                    gACACATTTTTATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCt                   <  1:822260/140‑1 (MQ=255)

                                                                                                                             ttATCTCATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCTTAGTCCCAc          <  2:1126038/140‑1 (MQ=255)

                                                                                                                                 ctcATCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCTTAGTCCCACGTAg      >  2:269701/1‑140 (MQ=255)

                                                                                                                                     tCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCTTAGTCCCACGTAGCGaa  >  2:618846/1‑140 (MQ=255)

                                                                                                                                     tCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCTTAGTCCCACGTAGCGaa  >  2:1091959/1‑140 (MQ=255)

                                                                                                                                     tCGCGT‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCTTAGTCCCACGTAGCGaa  >  1:773387/1‑140 (MQ=255)

CGTAGCGATTCGCTACCACTTATTTAAAGATAAGACGTCCTTTTCAGAGTGCAAATTTCACAACCACTTATTTGATTTATAACAACTTTCACAAGCACGTAATTTTGTCGCAAAATGACACATTTTTATCTCATCGCG‑‑TTTTTTTAATCATAAGAGCGGCTTATGGATAATTATTGGAGATGATATCTATTCTCGCTAAGAAGCTGTTGCAGGATATTACCAAACGCGGGTCTGCCCGCGTCAGTTCACTAAGCTTAGTCCCACGTAGCGAA  >  NC_000913/1067739‑1068010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`