| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,560,085 | (T)6→7 | intergenic (+19/‑172) | intZ → / → yffL | CPZ‑55 prophage; putative phage integrase IntZ/CPZ‑55 prophage; uncharacterized protein YffL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,560,079 | 1 | . | T | 98.4% | 213.7 / ‑3.6 | 63 | intergenic (+13/‑178) | intZ/yffL | CPZ‑55 prophage; putative phage integrase IntZ/CPZ‑55 prophage; uncharacterized protein YffL |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (28/34); total (28/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
GAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGC‑TTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTAATTATTCCATTA > NC_000913/2559940‑2560210 | gAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGc < 2:646474/140‑1 (MQ=255) aTAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGC‑ttttt‑tt > 2:1059572/1‑139 (MQ=255) aTAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGC‑ttttt‑tt > 1:425301/1‑139 (MQ=255) tAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGC‑ttttt‑ttg > 1:1607926/1‑138 (MQ=255) gCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAgc > 1:898460/1‑140 (MQ=255) cGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAgcg < 2:267375/140‑1 (MQ=255) cGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAgcg < 2:350588/140‑1 (MQ=255) gTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAgcgc > 1:90017/1‑140 (MQ=255) aaCCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAAtttt < 1:460107/140‑1 (MQ=255) cAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCa < 2:1503686/140‑1 (MQ=255) cAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCa < 2:538116/140‑1 (MQ=255) cAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCa < 1:25744/140‑1 (MQ=255) cAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACAGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCCATTTTGCa < 2:1419469/140‑1 (MQ=255) cAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGAAGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCa < 2:49567/140‑1 (MQ=255) aGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCAt < 2:915185/140‑1 (MQ=255) ggCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCAtt < 1:1604553/140‑1 (MQ=255) ggCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCAtt > 2:501919/1‑140 (MQ=255) ggCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCAtt < 1:1253929/140‑1 (MQ=255) gCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCAttt > 2:666178/1‑140 (MQ=255) gCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCAttt > 2:513503/1‑140 (MQ=255) gCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCAttt > 1:277583/1‑140 (MQ=255) gCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAAAGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCAttt > 2:1548382/1‑140 (MQ=255) gCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAAACGGGATGCAAAATTCAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCAttt > 2:689416/1‑140 (MQ=255) tGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTg > 2:653100/1‑140 (MQ=255) ccTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGta > 1:1246111/1‑140 (MQ=255) tACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGtata < 1:1143722/140‑1 (MQ=255) gCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTAtttg > 1:788580/1‑140 (MQ=255) gCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGAAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTAtttg > 1:915098/1‑140 (MQ=255) cGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTAtttgtttt > 1:1196336/1‑140 (MQ=255) cGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTtgtg < 2:768210/140‑1 (MQ=255) cGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTtgtg < 2:982569/140‑1 (MQ=255) cGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTtgtg < 2:702248/140‑1 (MQ=255) cGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTtgtg < 1:682633/140‑1 (MQ=255) cGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTtgtg < 1:782106/140‑1 (MQ=255) gAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTtgtgt < 2:842767/140‑1 (MQ=255) aGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTtgtgtg > 2:1611365/1‑140 (MQ=255) aaTGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGtt < 1:510563/140‑1 (MQ=255) aaTGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGtt < 1:653100/140‑1 (MQ=255) tgatgCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTa < 1:133643/140‑1 (MQ=255) gatgCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTaa < 1:1059572/140‑1 (MQ=255) gatgCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTaa < 2:1364015/140‑1 (MQ=255) gatgCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTaa < 2:1607926/140‑1 (MQ=255) atgCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAAc < 1:1549592/140‑1 (MQ=255) ttACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCt > 2:924827/1‑140 (MQ=255) ttACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCt < 1:708026/140‑1 (MQ=255) aCGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGa > 1:730848/1‑140 (MQ=255) aCGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGaa > 2:1430186/1‑140 (MQ=255) aCGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGaa > 1:331016/1‑140 (MQ=255) ggCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCg > 2:1335131/1‑140 (MQ=255) tAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCg > 2:1132495/1‑140 (MQ=255) tAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCg > 1:78900/1‑140 (MQ=255) tAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGGATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCg > 2:380185/1‑140 (MQ=255) tCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTTTATTCAATTTGCCGGCTTCGTCCGGcttt > 1:991978/1‑140 (MQ=255) tCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGcttt > 1:737404/1‑140 (MQ=255) aCCGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCg < 2:157301/140‑1 (MQ=255) aCCGGAATGAATAATTAAGCGGC‑TTTTTGTGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCg < 1:689416/140‑1 (MQ=255) ccGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGc > 1:1042011/1‑140 (MQ=255) cGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCt < 1:1611365/140‑1 (MQ=255) cGGAATGAATAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCt < 2:1154078/140‑1 (MQ=255) gaatgaatAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTaa > 2:1306622/1‑140 (MQ=255) gaatgaatAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTACATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTaa > 1:1341899/1‑140 (MQ=255) tgaatAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTAatta < 2:317426/140‑1 (MQ=255) tgaatAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTAatta < 1:134561/140‑1 (MQ=255) gaatAATTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTAattat < 2:115028/140‑1 (MQ=255) aataatTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTAattatt > 2:341212/1‑140 (MQ=255) aatTAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTAattattcca < 2:1196336/140‑1 (MQ=255) tAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTAattattccatta < 1:501919/140‑1 (MQ=255) tAAGCGGCTTTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTAattattccatta > 1:945443/1‑140 (MQ=255) | GAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGC‑TTTTT‑TGCAAAGCGCAATTTTGCATTTTGTATAAGTATTTGTTTTGTGTGGTTTAACTATCACCTGATAAGAAACCTGTATTCAATTTGCCGGATTCGTCCGGCTTTTCTTTTTCGCTAATTATTCCATTA > NC_000913/2559940‑2560210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |