BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,509,233	A→G	pseudogene (225/471 nt)	insO →	KpLE2 phage‑like element; IS911B regulator fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,509,233	0	A	G	100.0%	450.4 / NA	119	pseudogene (225/471 nt)	insO	KpLE2 phage‑like element; IS911B regulator fragment
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (52/67); total (52/67)

Only 100 of 119 total aligned reads displayed.

GCAAGAAGCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAA  >  NC_000913/4509099‑4509369

 cAAGAAGCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGtt                                                                                                                                    <  2:1343696/140‑1 (MQ=255)

  aagaagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTg                                                                                                                                   <  2:106101/140‑1 (MQ=255)

  aagaagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTg                                                                                                                                   <  2:1061445/140‑1 (MQ=255)

  aagaagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTg                                                                                                                                   <  2:1267659/140‑1 (MQ=255)

  aagaagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTg                                                                                                                                   <  2:69076/140‑1 (MQ=255)

  aagaagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTg                                                                                                                                   <  1:384680/140‑1 (MQ=255)

   agaagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGc                                                                                                                                  <  2:225809/140‑1 (MQ=255)

    gaagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCt                                                                                                                                 <  2:622167/140‑1 (MQ=255)

     aagCATCGCCACAATGGCGACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTa                                                                                                                                <  2:377625/140‑1 (MQ=255)

     aagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTa                                                                                                                                <  2:472880/140‑1 (MQ=255)

     aagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTa                                                                                                                                <  2:1638066/140‑1 (MQ=255)

     aagCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTa                                                                                                                                <  1:1126558/140‑1 (MQ=255)

         aTCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATccc                                                                                                                            >  1:1506507/1‑140 (MQ=255)

            gCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTaa                                                                                                                         <  2:620179/140‑1 (MQ=255)

            gCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTaa                                                                                                                         <  2:631363/140‑1 (MQ=255)

            gCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTaa                                                                                                                         <  2:700735/140‑1 (MQ=255)

            gCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTaa                                                                                                                         <  2:1064747/140‑1 (MQ=255)

            gCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTaa                                                                                                                         <  1:517284/140‑1 (MQ=255)

                           cGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCa                                                                                                          >  1:1236055/1‑140 (MQ=255)

                           cGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCa                                                                                                          >  2:582113/1‑140 (MQ=255)

                           cGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCa                                                                                                          >  2:748236/1‑140 (MQ=255)

                            ggAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAg                                                                                                         <  1:338765/140‑1 (MQ=255)

                            ggAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAg                                                                                                         <  1:172238/140‑1 (MQ=255)

                             gagaGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGt                                                                                                        >  1:89175/1‑140 (MQ=255)

                               gagGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTc                                                                                                      >  2:939254/1‑140 (MQ=255)

                                   cTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCg                                                                                                  >  1:967881/1‑140 (MQ=255)

                                     aCCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTg                                                                                                >  2:1437596/1‑140 (MQ=255)

                                            gggACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGc                                                                                         <  1:1579636/140‑1 (MQ=255)

                                            gggACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGc                                                                                         <  1:224555/140‑1 (MQ=255)

                                            gggACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGc                                                                                         <  1:304741/140‑1 (MQ=255)

                                             ggACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGATCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGcc                                                                                        <  1:32630/140‑1 (MQ=255)

                                               aCGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTGCGCCGTGACCGAGCCaa                                                                                      <  2:69411/140‑1 (MQ=255)

                                                 gCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAAt                                                                                    >  1:978589/1‑140 (MQ=255)

                                                 gCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCACCGTGACCGAGCCAAAt                                                                                    >  1:1288358/1‑140 (MQ=255)

                                                    ggCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAg                                                                                 <  1:1044957/140‑1 (MQ=255)

                                                      cTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAggg                                                                               >  2:1055910/1‑139 (MQ=255)

                                                      cTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGgt                                                                               <  1:1164332/140‑1 (MQ=255)

                                                       ttGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGgtg                                                                              <  1:1206001/140‑1 (MQ=255)

                                                        tGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGgtgt                                                                             >  1:1040847/1‑140 (MQ=255)

                                                          cTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTgtgg                                                                           >  2:1436512/1‑140 (MQ=255)

                                                            ggCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTgtggtg                                                                         >  2:1282168/1‑140 (MQ=255)

                                                              cAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGTATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCg                                                                       <  1:477481/140‑1 (MQ=255)

                                                              cAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCg                                                                       <  2:1310471/140‑1 (MQ=255)

                                                              cAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCg                                                                       <  1:748236/140‑1 (MQ=255)

                                                              cAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCg                                                                       <  2:1482824/140‑1 (MQ=255)

                                                                 gCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTg                                                                    <  2:1094652/140‑1 (MQ=255)

                                                                 gCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTg                                                                    >  2:1390360/1‑140 (MQ=255)

                                                                   tCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGAt                                                                  <  2:1040847/140‑1 (MQ=255)

                                                                   tCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGAt                                                                  <  1:1269615/140‑1 (MQ=255)

                                                                    cATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTGCCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGAtg                                                                 <  2:781602/140‑1 (MQ=255)

                                                                    cATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGAtg                                                                 <  1:333470/140‑1 (MQ=255)

                                                                    cATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGAtg                                                                 <  2:640228/140‑1 (MQ=255)

                                                                    cATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGAtg                                                                 <  1:448112/140‑1 (MQ=255)

                                                                      tGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGTCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGAtgtg                                                               <  1:1431214/140‑1 (MQ=255)

                                                                      tGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGAtgtg                                                               <  2:318785/140‑1 (MQ=255)

                                                                       gAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACTGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGa                                                              <  1:1483127/140‑1 (MQ=255)

                                                                       gAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAAC‑ACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGAc                                                             <  1:163207/140‑1 (MQ=255)

                                                                        aaaGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGAc                                                             <  1:1539089/140‑1 (MQ=255)

                                                                        aaaGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGAc                                                             <  2:370125/140‑1 (MQ=255)

                                                                        aaaGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGAc                                                             <  1:892064/140‑1 (MQ=255)

                                                                        aaaGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGAc                                                             <  2:967881/140‑1 (MQ=255)

                                                                         aaGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGAcc                                                            <  1:906610/140‑1 (MQ=255)

                                                                         aaGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGAcc                                                            <  2:723520/140‑1 (MQ=255)

                                                                            agCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCtat                                                         >  1:1180563/1‑140 (MQ=255)

                                                                               tGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATc                                                      >  1:1495356/1‑140 (MQ=255)

                                                                                 gggCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTg                                                    >  2:1254095/1‑140 (MQ=255)

                                                                                   gCTGGTCAGCTGTCAGTAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGa                                                  <  1:719174/140‑1 (MQ=255)

                                                                                   gCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGa                                                  >  2:424968/1‑140 (MQ=255)

                                                                                   gCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGa                                                  <  1:258987/140‑1 (MQ=255)

                                                                                   gCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGa                                                  <  1:582113/140‑1 (MQ=255)

                                                                                   gCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCACGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGa                                                  <  2:1189069/140‑1 (MQ=255)

                                                                                       gTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACggg                                              >  2:11294/1‑140 (MQ=255)

                                                                                       gTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACggg                                              >  1:672359/1‑140 (MQ=255)

                                                                                       gTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACggg                                              >  1:1083268/1‑140 (MQ=255)

                                                                                       gTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACggg                                              >  2:460977/1‑140 (MQ=255)

                                                                                       gTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACggg                                              >  2:413308/1‑140 (MQ=255)

                                                                                       gTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGCGTGGTGCGGTGATGTGACCTATATCTGGACggg                                              >  1:1259887/1‑140 (MQ=255)

                                                                                        tCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGt                                             >  2:1202213/1‑140 (MQ=255)

                                                                                        tCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGt                                             <  1:811158/140‑1 (MQ=255)

                                                                                             tGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAgcg                                        <  1:1191303/140‑1 (MQ=255)

                                                                                              gTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAgcgc                                       <  1:1436512/140‑1 (MQ=255)

                                                                                                 agcagcCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTgg                                    >  2:1424278/1‑140 (MQ=255)

                                                                                                 agcagcCGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTgg                                    >  2:16694/1‑140 (MQ=255)

                                                                                                      ccGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTa                               >  2:1258092/1‑140 (MQ=255)

                                                                                                       cGACTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTAc                              <  2:917244/140‑1 (MQ=255)

                                                                                                         aCTCACCGGTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCt                            <  1:1248927/140‑1 (MQ=255)

                                                                                                                 gTATAAACGTGGTGGTCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCgttg                    <  2:646943/140‑1 (MQ=255)

                                                                                                                           ggtggtCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCt          >  2:424175/1‑140 (MQ=255)

                                                                                                                            gtggtCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTg         >  2:170256/1‑140 (MQ=255)

                                                                                                                            gtggtCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTg         >  1:688635/1‑140 (MQ=255)

                                                                                                                            gtggtCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTg         >  1:10884/1‑140 (MQ=255)

                                                                                                                            gtggtCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTg         >  1:1074429/1‑140 (MQ=255)

                                                                                                                            gtggtCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTg         >  2:376627/1‑140 (MQ=255)

                                                                                                                            gtggtCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTg         >  1:1061921/1‑140 (MQ=255)

                                                                                                                            gtggtCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTg         >  2:1197906/1‑140 (MQ=255)

                                                                                                                               gtCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTc      <  1:1254095/140‑1 (MQ=255)

                                                                                                                                tCATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCg     >  2:267400/1‑140 (MQ=255)

                                                                                                                                 cATGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGc    >  1:419518/1‑140 (MQ=255)

                                                                                                                                   tGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCaa  >  2:208335/1‑140 (MQ=255)

                                                                                                                                   tGAGCATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCaa  >  2:687952/1‑140 (MQ=255)

GCAAGAAGCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAA  >  NC_000913/4509099‑4509369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`