BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,535,720	A→G	pseudogene (706/1017 nt)	yjhR →	KpLE2 phage‑like element; PLD‑like domain‑containing protein YjhR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,535,720	0	A	G	100.0%	400.2 / NA	106	pseudogene (706/1017 nt)	yjhR	KpLE2 phage‑like element; PLD‑like domain‑containing protein YjhR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (48/58); total (48/58)

Only 100 of 107 total aligned reads displayed.

AGACTCTTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTACCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGTTAATCGTG  >  NC_000913/4535598‑4535852

aGACTCTTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATaaa                                                                                                                     <  2:753617/140‑1 (MQ=255)

aGACTCTTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATaaa                                                                                                                     <  2:232182/140‑1 (MQ=255)

  aCTCTTGCTGAAGCTCAAAAGAAAATAACGATTATTGCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATaaaaa                                                                                                                   <  1:413832/140‑1 (MQ=255)

  aCTCTTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATaaaaa                                                                                                                   <  1:998142/140‑1 (MQ=255)

  aCTCTTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATaaaaa                                                                                                                   <  2:59113/140‑1 (MQ=255)

     ctTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTg                                                                                                                <  2:1057433/140‑1 (MQ=255)

     ctTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTg                                                                                                                <  2:1106398/140‑1 (MQ=255)

     ctTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTg                                                                                                                <  2:1264940/140‑1 (MQ=255)

     ctTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTg                                                                                                                <  2:568557/140‑1 (MQ=255)

     ctTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTg                                                                                                                <  1:298236/140‑1 (MQ=255)

     ctTGCCGGAGCTCAAAAGAAAATAACGATTATTGCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTg                                                                                                                <  1:1247239/140‑1 (MQ=255)

        gCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCaa                                                                                                             >  2:1373163/1‑140 (MQ=255)

           ggAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAatat                                                                                                          >  1:1422246/1‑140 (MQ=255)

           ggAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAatat                                                                                                          >  1:784294/1‑140 (MQ=255)

             aGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAg                                                                                                        >  1:816735/1‑140 (MQ=255)

             aGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAg                                                                                                        >  1:136861/1‑140 (MQ=255)

                tCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAgcgc                                                                                                     >  2:296759/1‑140 (MQ=255)

                tCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAgcgc                                                                                                     >  2:648056/1‑140 (MQ=255)

                tCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAgcgc                                                                                                     <  1:250192/140‑1 (MQ=255)

                   aaaGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATg                                                                                                  <  1:279203/140‑1 (MQ=255)

                      gAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCg                                                                                               <  2:1513602/140‑1 (MQ=255)

                         aaTAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCgatg                                                                                            >  2:330397/1‑140 (MQ=255)

                         aaTAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCgatg                                                                                            >  2:256979/1‑140 (MQ=255)

                             aCGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCgatgatga                                                                                        <  1:776028/140‑1 (MQ=255)

                              cGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCgatgatgat                                                                                       <  2:884777/140‑1 (MQ=255)

                                  tattTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGc                                                                                   <  2:794908/140‑1 (MQ=255)

                                   attTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCg                                                                                  >  2:1073353/1‑140 (MQ=255)

                                    tttCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGt                                                                                 <  1:869671/140‑1 (MQ=255)

                                        cccTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAgg                                                                             <  1:1568690/140‑1 (MQ=255)

                                         ccTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGga                                                                            >  2:1585465/1‑140 (MQ=255)

                                          cTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGgag                                                                           >  1:814192/1‑140 (MQ=255)

                                            tGGTTATCCTGGCAAAATGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTACCCGGGGCATTGATAGTGCCGTGGTGACGGATAAAACCTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaa                                                                         <  2:64848/140‑1 (MQ=255)

                                            tGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaa                                                                         <  1:311030/140‑1 (MQ=255)

                                            tGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaa                                                                         >  2:1555393/1‑140 (MQ=255)

                                            tGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaa                                                                         <  1:36557/140‑1 (MQ=255)

                                            tGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaa                                                                         >  2:966941/1‑140 (MQ=255)

                                             ggTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaaa                                                                        >  2:1194948/1‑140 (MQ=255)

                                             ggTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaaa                                                                        <  2:1180003/140‑1 (MQ=255)

                                             ggTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaaa                                                                        >  2:386055/1‑140 (MQ=255)

                                             ggTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaaa                                                                        >  1:1464227/1‑140 (MQ=255)

                                             ggTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGaaa                                                                        >  1:1440423/1‑140 (MQ=255)

                                              gTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAaac                                                                       <  2:806454/140‑1 (MQ=255)

                                                 aTCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAaacaac                                                                    <  2:142777/140‑1 (MQ=255)

                                                 aTCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAaacaac                                                                    >  2:587006/1‑140 (MQ=255)

                                                 aTCCTAGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAaacaac                                                                    <  1:463620/140‑1 (MQ=255)

                                                  tCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAacaaca                                                                   >  1:780327/1‑140 (MQ=255)

                                                  tCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAacaaca                                                                   >  2:178893/1‑140 (MQ=255)

                                                  tCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAacaaca                                                                   >  1:577068/1‑140 (MQ=255)

                                                   ccTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACAt                                                                  >  2:154122/1‑140 (MQ=255)

                                                      ggCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATctg                                                               <  1:613779/140‑1 (MQ=255)

                                                      ggCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATctg                                                               <  2:784294/140‑1 (MQ=255)

                                                      ggCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATctg                                                               <  2:1422246/140‑1 (MQ=255)

                                                      ggCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTGCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAGCATctg                                                               <  2:1567796/140‑1 (MQ=255)

                                                       gCAAGAAGAGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATctgc                                                              >  2:1070461/1‑140 (MQ=255)

                                                       gCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATctgc                                                              >  2:886519/1‑140 (MQ=255)

                                                       gCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATctgc                                                              >  1:908528/1‑140 (MQ=255)

                                                       gCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATctgc                                                              >  2:195966/1‑140 (MQ=255)

                                                        cAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATctgct                                                             <  1:1360982/140‑1 (MQ=255)

                                                            aaGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAat                                                         >  1:83579/1‑140 (MQ=255)

                                                              gTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAatga                                                       <  1:1355084/140‑1 (MQ=255)

                                                              gTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAatga                                                       <  2:682694/140‑1 (MQ=255)

                                                              gTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAatga                                                       <  2:816735/140‑1 (MQ=255)

                                                              gTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAatga                                                       <  1:1156809/140‑1 (MQ=255)

                                                              gTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAatga                                                       <  1:1055091/140‑1 (MQ=255)

                                                              gTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAatga                                                       <  2:1035/140‑1 (MQ=255)

                                                                 gAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGc                                                    >  2:947931/1‑140 (MQ=255)

                                                                 gAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGc                                                    >  2:249193/1‑140 (MQ=255)

                                                                      aaCGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTg                                               >  2:723574/1‑140 (MQ=255)

                                                                         gggATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGaaa                                            >  2:480344/1‑140 (MQ=255)

                                                                         gggATTTCTGGCATCAATGGCTTTGACCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGaaa                                            >  1:365337/1‑140 (MQ=255)

                                                                          ggATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGaaaa                                           <  1:1194948/140‑1 (MQ=255)

                                                                          ggATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGaaaa                                           <  1:12332/140‑1 (MQ=255)

                                                                           gATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAg                                          <  1:1373163/140‑1 (MQ=255)

                                                                           gATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAg                                          <  1:648056/140‑1 (MQ=255)

                                                                           gATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAg                                          <  1:296759/140‑1 (MQ=255)

                                                                              ttCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTc                                       <  1:330397/140‑1 (MQ=255)

                                                                               tCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCa                                      <  2:337594/140‑1 (MQ=255)

                                                                                 tGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAAt                                    <  1:157348/140‑1 (MQ=255)

                                                                                 tGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAAt                                    <  1:733286/140‑1 (MQ=255)

                                                                                 tGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAAt                                    <  1:457045/140‑1 (MQ=255)

                                                                                 tGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAAt                                    <  1:440690/140‑1 (MQ=255)

                                                                                 tGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAAt                                    >  2:1287749/1‑140 (MQ=255)

                                                                                   gCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATaa                                  >  1:903107/1‑140 (MQ=255)

                                                                                    cATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAg                                 <  2:136861/140‑1 (MQ=255)

                                                                                    cATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAg                                 <  1:386055/140‑1 (MQ=255)

                                                                                        aaTGGCTTTGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATgg                             <  2:1224498/140‑1 (MQ=255)

                                                                                              tttGGCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCg                       >  1:1605183/1‑140 (MQ=255)

                                                                                                 ggCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTa                    >  2:764234/1‑140 (MQ=255)

                                                                                                  gCCCGTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTAc                   >  2:122508/1‑140 (MQ=255)

                                                                                                      gTTCCCGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGaaa               >  2:1141517/1‑140 (MQ=255)

                                                                                                       ttCCCGGGGCATTGATATAGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAAt              >  2:282954/1‑140 (MQ=255)

                                                                                                           cttggCATTGATATTGGCGTGTTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAAGTGGt          <  2:953017/137‑1 (MQ=255)

                                                                                                           cGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGt          <  1:335052/140‑1 (MQ=255)

                                                                                                           cGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGt          <  2:1440423/140‑1 (MQ=255)

                                                                                                           cGGGGCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGt          <  2:1511439/140‑1 (MQ=255)

                                                                                                             gggCATTGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGTTa        <  2:429/140‑1 (MQ=255)

                                                                                                                  ttGATATTGCCGTGGTGACGGCTAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGTTAATCgc   >  2:929368/1‑139 (MQ=255)

                                                                                                                  ttGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGTTAATCgt   >  2:433832/1‑140 (MQ=255)

                                                                                                                  ttGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGTTAATCgt   >  1:750921/1‑140 (MQ=255)

                                                                                                                   tGATATTGCCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGTTAATCgtg  >  2:213762/1‑140 (MQ=255)

AGACTCTTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTACCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGTTAATCGTG  >  NC_000913/4535598‑4535852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`