BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	855,744	T→C	M1M (ATG→GTG) †	ldtB ←	L,D‑transpeptidase YbiS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	855,744	0	T	C	100.0%	390.7 / NA	102	M1M (ATG→GTG) †	ldtB	L,D‑transpeptidase YbiS
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (38/64); total (38/64)

Only 100 of 105 total aligned reads displayed.

AGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTG  >  NC_000913/855607‑855879

aGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGt                                                                                                                                       >  2:214886/1‑140 (MQ=255)

 ggAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGtt                                                                                                                                      <  1:1632543/140‑1 (MQ=255)

  gAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTa                                                                                                                                     >  2:1248891/1‑140 (MQ=255)

     tGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGc                                                                                                                                  >  1:1131730/1‑140 (MQ=255)

      ggTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCg                                                                                                                                 <  2:441300/140‑1 (MQ=255)

       gTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCga                                                                                                                                >  2:1171954/1‑140 (MQ=255)

         gATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCgaga                                                                                                                              >  2:709393/1‑140 (MQ=255)

               cTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTtgt                                                                                                                        <  2:719739/140‑1 (MQ=255)

                 gATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGc                                                                                                                      >  1:1025971/1‑140 (MQ=255)

                 gATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGc                                                                                                                      >  1:321906/1‑140 (MQ=255)

                  aTTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGAACTGCCAAAACCGACAACAGCGAAGGCCGCTGCGAATAATGGTTTCAATTTCATAATCACGGTAAGCGAGATTTTGTGcc                                                                                                                     >  2:1018693/1‑140 (MQ=255)

                      tGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGc                                                                                                                 <  2:718830/140‑1 (MQ=255)

                      tGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGc                                                                                                                 >  2:1207857/1‑140 (MQ=255)

                       gACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCa                                                                                                                <  1:970508/140‑1 (MQ=255)

                       gACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAACCGACAACAGCGAAGGCCCCGGCGAATAAAGTTTTCAATTTCATATTCAAGTTAAGCGAGAGTTTGCGCCTGGct                                                                                                                >  2:376154/1‑139 (MQ=255)

                         ccaaccaGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAgg                                                                                                              >  2:1384535/1‑140 (MQ=255)

                         ccaaccaGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAgg                                                                                                              >  2:1244157/1‑140 (MQ=255)

                            accaGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCa                                                                                                           <  2:610436/140‑1 (MQ=255)

                              caGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCAtt                                                                                                         <  2:751475/140‑1 (MQ=255)

                              caGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCAtt                                                                                                         <  2:87579/140‑1 (MQ=255)

                              caGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCAtt                                                                                                         <  1:201775/140‑1 (MQ=255)

                              caGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTACAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCAtt                                                                                                         <  1:1553138/140‑1 (MQ=255)

                                   gACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGtt                                                                                                    <  1:1102325/140‑1 (MQ=255)

                                   gACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGtt                                                                                                    <  1:75330/140‑1 (MQ=255)

                                   gACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGtt                                                                                                    <  1:214886/140‑1 (MQ=255)

                                   gACTCCCGTAGGTTGGCAGAGGATCAGTTGCCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGtt                                                                                                    <  1:1344606/140‑1 (MQ=255)

                                     cTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTga                                                                                                  <  1:29201/140‑1 (MQ=255)

                                     cTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTga                                                                                                  <  2:537810/140‑1 (MQ=255)

                                     cTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTga                                                                                                  <  1:355050/140‑1 (MQ=255)

                                     cTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTga                                                                                                  <  1:694138/140‑1 (MQ=255)

                                     cTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTga                                                                                                  <  1:1648907/140‑1 (MQ=255)

                                      tCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTgag                                                                                                 <  1:1185122/140‑1 (MQ=255)

                                      tCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTgag                                                                                                 >  1:862985/1‑140 (MQ=255)

                                      tCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTgag                                                                                                 >  2:1567907/1‑140 (MQ=255)

                                      tCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTgag                                                                                                 <  1:12025/140‑1 (MQ=255)

                                      tCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCAGGCAGGCCATTGGGTTgag                                                                                                 <  2:1524163/140‑1 (MQ=255)

                                        ccGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGACCATTGGGTTGAGaa                                                                                               <  2:966661/140‑1 (MQ=255)

                                          gTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGGTGAGAata                                                                                             >  2:774401/1‑140 (MQ=255)

                                              gTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTag                                                                                         <  2:540085/140‑1 (MQ=255)

                                               ttGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTaga                                                                                        <  2:738279/140‑1 (MQ=255)

                                                   cAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTAt                                                                                    >  2:1381649/1‑140 (MQ=255)

                                                        gATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGaa                                                                               <  2:523291/140‑1 (MQ=255)

                                                         aTAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAg                                                                              <  1:1528749/140‑1 (MQ=255)

                                                         aTAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAg                                                                              <  2:485186/140‑1 (MQ=255)

                                                         aTAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGCTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAg                                                                              <  2:1057118/140‑1 (MQ=255)

                                                          tAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAgc                                                                             <  1:984357/140‑1 (MQ=255)

                                                          tAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAgc                                                                             <  1:852045/140‑1 (MQ=255)

                                                          aaaGTTACCGCAGAGCCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAgc                                                                             <  1:376154/139‑1 (MQ=255)

                                                            aGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAgcgc                                                                           <  2:93215/140‑1 (MQ=255)

                                                             gTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCa                                                                          >  1:667087/1‑140 (MQ=255)

                                                             gTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCa                                                                          >  2:1187500/1‑140 (MQ=255)

                                                                 ccGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATtat                                                                      <  1:1171954/140‑1 (MQ=255)

                                                                  cGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGGAGGCCATTGGGGTGAGAATATTAGAGCATTGGAAGCGCATtata                                                                     >  2:1416262/1‑140 (MQ=255)

                                                                  cGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATtata                                                                     >  1:1564908/1‑140 (MQ=255)

                                                                  cGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATCGGAAGCGCATtata                                                                     >  1:1185246/1‑140 (MQ=255)

                                                                    cAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAg                                                                   >  2:658075/1‑140 (MQ=255)

                                                                    cAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAg                                                                   <  1:1248891/140‑1 (MQ=255)

                                                                      gagGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGtt                                                                 <  1:1384535/140‑1 (MQ=255)

                                                                      gagGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGtt                                                                 <  1:1244157/140‑1 (MQ=255)

                                                                      gagGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGtt                                                                 <  2:405041/140‑1 (MQ=255)

                                                                      gagGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGtt                                                                 <  2:828693/140‑1 (MQ=255)

                                                                      gagGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGtt                                                                 <  2:1501809/140‑1 (MQ=255)

                                                                      gagGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGtt                                                                 <  2:31183/140‑1 (MQ=255)

                                                                       agGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTc                                                                >  1:582837/1‑140 (MQ=255)

                                                                        ggCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCa                                                               >  1:1236605/1‑140 (MQ=255)

                                                                            gTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTcc                                                           >  2:1494622/1‑140 (MQ=255)

                                                                            gTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTcc                                                           >  2:91441/1‑140 (MQ=255)

                                                                                 gCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTc                                                      <  1:882725/140‑1 (MQ=255)

                                                                                 gCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTc                                                      <  2:1131730/140‑1 (MQ=255)

                                                                                    aaaGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTcaca                                                   <  2:556638/140‑1 (MQ=255)

                                                                                      aGCCGACAGCAGCGAGGGCCGCTGCGAATAATGTTTTCAAATTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGt                                                 <  2:1094175/140‑1 (MQ=255)

                                                                                      aGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGt                                                 <  1:18917/140‑1 (MQ=255)

                                                                                      aGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGt                                                 <  1:982202/140‑1 (MQ=255)

                                                                                      aGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGt                                                 <  1:1461940/140‑1 (MQ=255)

                                                                                       gCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTg                                                >  2:1506281/1‑140 (MQ=255)

                                                                                       gCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTg                                                >  2:1261361/1‑140 (MQ=255)

                                                                                           acaacaGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAAt                                            <  2:1268026/140‑1 (MQ=255)

                                                                                            caacaGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATc                                           >  2:1314254/1‑140 (MQ=255)

                                                                                              acaGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAg                                         <  2:196779/140‑1 (MQ=255)

                                                                                                    aaGGCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATgtgt                                   >  2:1397165/1‑140 (MQ=255)

                                                                                                       gCCGCTGCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACg                                >  2:1309417/1‑140 (MQ=255)

                                                                                                             gCGAATAATGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATca                          <  1:709393/140‑1 (MQ=255)

                                                                                                                 ataatGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACAtt                      >  1:347158/1‑140 (MQ=255)

                                                                                                                 ataatGTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACAtt                      >  2:1076353/1‑140 (MQ=255)

                                                                                                                      gTTTTCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGAATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTg                 >  2:888188/1‑140 (MQ=255)

                                                                                                                        tttCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGcc               <  2:534095/140‑1 (MQ=255)

                                                                                                                        tttCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGcc               >  2:638383/1‑140 (MQ=255)

                                                                                                                         ttCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCt              <  1:769135/140‑1 (MQ=255)

                                                                                                                          tCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCtt             >  2:707756/1‑140 (MQ=255)

                                                                                                                          tCAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCtt             >  1:661248/1‑140 (MQ=255)

                                                                                                                           cAATTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCttt            >  2:1606170/1‑140 (MQ=255)

                                                                                                                             aTTTCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTgg          <  2:224456/140‑1 (MQ=255)

                                                                                                                               ttCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCt        <  1:248311/140‑1 (MQ=255)

                                                                                                                               ttCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCt        <  1:91441/140‑1 (MQ=255)

                                                                                                                                tCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTTCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCtt       <  1:1207857/140‑1 (MQ=255)

                                                                                                                                tCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCtt       <  1:1367287/140‑1 (MQ=255)

                                                                                                                                tCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCtt       <  2:1603910/140‑1 (MQ=255)

                                                                                                                                tCATATTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCACTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCtt       <  1:1484160/140‑1 (MQ=255)

                                                                                                                                    atTCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAgt   >  1:1388573/1‑140 (MQ=255)

                                                                                                                                     ttCACGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAgtg  <  2:1236605/140‑1 (MQ=255)

AGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTG  >  NC_000913/855607‑855879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`