Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 991,957 C→T P446S (CCG→TCG)  pepN → aminopeptidase N

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913991,9570CT100.0% 337.0 / NA 96P446S (CCG→TCG) pepNaminopeptidase N
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (36/60);  total (36/60)

AGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACACCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGAACTGTATGA  >  NC_000913/991827‑992093
                                                                                                                                  |                                                                                                                                        
aGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGa                                                                                                                                 <  2:1620912/140‑1 (MQ=255)
  ggATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGAcc                                                                                                                               >  1:1044722/1‑140 (MQ=255)
      gctgCTTTGTTTCGGGCGTCATGATGCTAGTGTAGTGGCGTGTGACGATTTTGAGCCGGCGCTGGAAGATGCGTCGAATGTCGCGCTCTCCCAGTTCCTCCGTTGGTACAGCCAGACCGGTACATCGATTGTGACCGGCa                                                                                                                           <  2:304417/137‑1 (MQ=255)
      gCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCa                                                                                                                           <  1:1177194/140‑1 (MQ=255)
      gCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCa                                                                                                                           <  2:352942/140‑1 (MQ=255)
      gCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCa                                                                                                                           <  1:939881/140‑1 (MQ=255)
        aGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCaaa                                                                                                                         <  2:288172/140‑1 (MQ=255)
               tttCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACt                                                                                                                  <  2:1529526/140‑1 (MQ=255)
               tttCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGAGCAGGCGATGGAAGATGCGTCGATTGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACt                                                                                                                  <  1:120475/140‑1 (MQ=255)
                 tCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTAc                                                                                                                <  1:1104955/140‑1 (MQ=255)
                  cGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACa                                                                                                               <  2:626186/140‑1 (MQ=255)
                        tCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAGGACGACTACAATCCgg                                                                                                         <  1:1284177/140‑1 (MQ=255)
                           tgatgGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGaaa                                                                                                      <  1:913868/140‑1 (MQ=255)
                              tgGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCg                                                                                                   <  1:446060/140‑1 (MQ=255)
                              tgGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCg                                                                                                   <  1:354936/140‑1 (MQ=255)
                               ggTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGa                                                                                                  <  1:806438/140‑1 (MQ=255)
                               ggTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGa                                                                                                  <  2:366069/140‑1 (MQ=255)
                               ggTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGa                                                                                                  <  1:164210/140‑1 (MQ=255)
                               ggTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGa                                                                                                  <  1:1117481/140‑1 (MQ=255)
                               ggTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGa                                                                                                  <  1:247549/140‑1 (MQ=255)
                               ggTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGa                                                                                                  <  1:280607/140‑1 (MQ=255)
                                gTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGACGATGCGTCGAATGTCGACCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAg                                                                                                 <  2:784781/140‑1 (MQ=255)
                                gTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAg                                                                                                 <  2:1436715/140‑1 (MQ=255)
                                 tAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGc                                                                                                <  1:1414154/140‑1 (MQ=255)
                                 tAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGc                                                                                                <  1:988838/140‑1 (MQ=255)
                                 tAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGc                                                                                                <  2:119105/140‑1 (MQ=255)
                                   gTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAg                                                                                              >  1:1611060/1‑140 (MQ=255)
                                   gTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAg                                                                                              >  1:191413/1‑140 (MQ=255)
                                   gTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAg                                                                                              >  1:251734/1‑140 (MQ=255)
                                    tGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGt                                                                                             <  2:601750/140‑1 (MQ=255)
                                    tGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGt                                                                                             >  1:358399/1‑140 (MQ=255)
                                    tGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGt                                                                                             >  2:604787/1‑140 (MQ=255)
                                    tGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGt                                                                                             >  1:1401609/1‑140 (MQ=255)
                                    ggCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGt                                                                                             <  2:1167748/139‑1 (MQ=255)
                                      cAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTac                                                                                           >  2:1563010/1‑140 (MQ=255)
                                      cAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTac                                                                                           >  2:117575/1‑140 (MQ=255)
                                      cAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTac                                                                                           >  1:451885/1‑140 (MQ=255)
                                         cGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACAcc                                                                                        >  1:375818/1‑140 (MQ=255)
                                         cGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACAcc                                                                                        >  1:170071/1‑140 (MQ=255)
                                           aCCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCt                                                                                      >  1:442934/1‑140 (MQ=255)
                                           aCCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCt                                                                                      >  2:355144/1‑140 (MQ=255)
                                           aCCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCt                                                                                      >  1:966415/1‑140 (MQ=255)
                                           aCCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCt                                                                                      >  1:153780/1‑140 (MQ=255)
                                              tgtgACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGAc                                                                                   >  2:1348330/1‑140 (MQ=255)
                                                tgACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCa                                                                                 <  1:709837/140‑1 (MQ=255)
                                                     acTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATcagc                                                                            <  2:1572682/140‑1 (MQ=255)
                                                      cTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATcagcc                                                                           >  2:692619/1‑140 (MQ=255)
                                                                  gATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACgccag                                                               >  1:1509357/1‑140 (MQ=255)
                                                                  gATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACgccag                                                               <  2:358399/140‑1 (MQ=255)
                                                                   aTGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACgccagc                                                              <  2:251734/140‑1 (MQ=255)
                                                                   aTGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACgccagc                                                              <  1:723993/140‑1 (MQ=255)
                                                                      gAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCAc                                                           <  1:1485333/140‑1 (MQ=255)
                                                                       aaGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACg                                                          >  1:317792/1‑140 (MQ=255)
                                                                          aTGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCg                                                       >  2:715194/1‑140 (MQ=255)
                                                                             cGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGAt                                                    <  1:827080/140‑1 (MQ=255)
                                                                             cGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGAt                                                    >  1:1578631/1‑140 (MQ=255)
                                                                             cGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGAt                                                    >  1:1100029/1‑140 (MQ=255)
                                                                              gTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATc                                                   >  1:1042262/1‑140 (MQ=255)
                                                                              gTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATc                                                   >  1:467428/1‑140 (MQ=255)
                                                                              gTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATc                                                   >  1:646017/1‑140 (MQ=255)
                                                                                cGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAg                                                 >  2:1194811/1‑140 (MQ=255)
                                                                                          tttcccccTTTTCCGCTGTTGGTACAGCCGGTCCGGTCCATCGTTTGTGACCGTCAAAGACGACTACCATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCTCGCCAGCCACGCCGGATCAGGCAGAAAAAc                                       <  2:442934/135‑1 (MQ=255)
                                                                                            tctcCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAg                                     >  2:1286343/1‑140 (MQ=255)
                                                                                              tcCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGcc                                   <  1:604787/140‑1 (MQ=255)
                                                                                              tcCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGcc                                   >  2:1169906/1‑140 (MQ=255)
                                                                                              tcCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGcc                                   <  2:1058815/140‑1 (MQ=255)
                                                                                              tcCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGcc                                   <  2:1024604/140‑1 (MQ=255)
                                                                                              ccccATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGcc                                   <  2:1238269/139‑1 (MQ=255)
                                                                                               cccATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCg                                  >  2:660433/1‑140 (MQ=255)
                                                                                               cccATTTCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCg                                  <  1:231445/140‑1 (MQ=255)
                                                                                                   tttCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGc                              >  2:683606/1‑140 (MQ=255)
                                                                                                    ttCCGCCGTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCa                             <  2:762872/140‑1 (MQ=255)
                                                                                                        gccgTTGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATAtt                         >  1:135110/1‑140 (MQ=255)
                                                                                                             tGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGtt                    <  2:327186/140‑1 (MQ=255)
                                                                                                             tGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGtt                    <  2:1044722/140‑1 (MQ=255)
                                                                                                             tGGTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGtt                    <  1:683548/140‑1 (MQ=255)
                                                                                                              ggTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGttt                   >  2:593766/1‑140 (MQ=255)
                                                                                                               gTACAGCCAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTg                  <  2:1349397/140‑1 (MQ=255)
                                                                                                                     ccAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCg            <  2:966415/140‑1 (MQ=255)
                                                                                                                     ccAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCg            <  2:1100029/140‑1 (MQ=255)
                                                                                                                     ccAGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCg            <  1:33957/140‑1 (MQ=255)
                                                                                                                       ggTCCGGTACATCGATTGTGACCGTCAAGGACGACTACAATCCGGAAACCGAGCAGTACGCCCTGACCATGAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  2:205955/139‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACCCCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:1278382/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:304569/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:100087/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:1089417/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:1194811/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:1250041/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  2:646017/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:355144/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  2:467428/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:692619/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:693321/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  1:812036/140‑1 (MQ=255)
                                                                                                                       aGTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGaa          <  2:153780/140‑1 (MQ=255)
                                                                                                                        gTCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGAAc         <  1:1563010/140‑1 (MQ=255)
                                                                                                                         tCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGAACt        >  1:197346/1‑140 (MQ=255)
                                                                                                                         tCCGGTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGAACt        >  2:1078718/1‑140 (MQ=255)
                                                                                                                             gTACATCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGAACTGTAt    >  1:208928/1‑140 (MQ=255)
                                                                                                                               acatCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGAACTGTATGa  >  2:850186/1‑140 (MQ=255)
                                                                                                                                  |                                                                                                                                        
AGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACACCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGAACTGTATGA  >  NC_000913/991827‑992093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: