Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,286,652	T→C	pseudogene (2263/2525 nt)	yejO ←	adhesin‑like autotransporter YejO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,286,652	0	T	C	100.0%	210.9 / NA	59	pseudogene (2263/2525 nt)	yejO	adhesin‑like autotransporter YejO
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (42/17);  total (42/17)

AACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGTGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATAGGGTCTAACAC  >  NC_000913/2286516‑2286784                                                                                                                                         |                                                                                                                                     aaCGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAGCTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGAt                                                                                                                                   <  2:235316/140‑1 (MQ=255)    gCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGc                                                                                                                                >  2:1529439/1‑140 (MQ=255)    gCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGc                                                                                                                                >  1:282832/1‑140 (MQ=255)        cTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTAc                                                                                                                            >  2:1478779/1‑140 (MQ=255)         tGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTAcc                                                                                                                           >  1:1195938/1‑140 (MQ=255)              ccAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGt                                                                                                                      >  2:714247/1‑140 (MQ=255)                     catcatTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCt                                                                                                               >  1:376418/1‑140 (MQ=255)                     catcatTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGCATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGGTCCCGCt                                                                                                               >  1:720344/1‑140 (MQ=255)                      atcatTATTAAATTTGCCATCGTCTTTACCTTTCCCCTGGTGAGAATCGGCGTATCCCTGCCGCCCGGCCGCTTTCAGCCGGGGTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCtt                                                                                                              <  2:633679/140‑1 (MQ=255)                      atcatTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCtt                                                                                                              >  2:594871/1‑140 (MQ=255)                      atcatTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCtt                                                                                                              >  2:823312/1‑140 (MQ=255)                        catTATTAATTTTGCCATCGTCATTACCTTTCCCCTGGTTAGAATCGGCGTTTTCCTGACGCACGGCCGCTTTCAGCCGGGGTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCa                                                                                                            <  2:1612486/140‑1 (MQ=255)                         tttattaATTTTGCCATCTTCATTACCTTTCCCCTGTTTAGAATCGGCGTTTCCCGGCCGCCCGGCCGTTTTCAGCCAGGTTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAg                                                                                                           <  2:1613235/139‑1 (MQ=255)                          ttattaAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAgc                                                                                                          >  1:963404/1‑140 (MQ=255)                           tattaAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAgcg                                                                                                         >  2:568388/1‑140 (MQ=255)                                  tttGCCATCGTCATTAACTTTCACCTGGTCAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAata                                                                                                  >  1:1623609/1‑140 (MQ=255)                                    tGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATc                                                                                                <  2:1005693/140‑1 (MQ=255)                                     gCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATcc                                                                                               >  1:603023/1‑140 (MQ=255)                                     gCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATcc                                                                                               >  1:1496273/1‑140 (MQ=255)                                     gCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGATCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATcc                                                                                               >  2:888679/1‑140 (MQ=255)                                       cATCGTCATTACCTTTCCCCTGGTTAGAATCGGCGTATTCCTGCCGCACGGCCGCTTTCAGCCGGGGTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCgg                                                                                             <  2:14974/140‑1 (MQ=255)                                       cATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTCTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCgg                                                                                             >  1:1289410/1‑140 (MQ=255)                                        aTCGTCTTTAACTTTCCCCGGGTTAGAGTCGCCTTTTTCCTGCCGCACGGCCCTTTTCAGCCGGGTTTCCGGCGTCGTCCCGTTTTGCTGCTCAATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCggg                                                                                            <  2:401665/140‑1 (MQ=255)                                          cGTCATTACCTTTCACCTGGTTAGATTCGCCGTATCCCTGCCGCCCGGCCGTTTTCAGCCAGGGTCCCAGCGTCGTACCGTTTTGCAGGCCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTa                                                                                          <  2:812274/140‑1 (MQ=255)                                          cGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTa                                                                                          <  1:1478779/140‑1 (MQ=255)                                          cGTAATTAACTTTCACCTGGTTAAAATCGGCGTTTTCCTGACGCCCGGCCGCTTTCACCCGGGGTGCCAGCGTGGTGCCGTTTTGCAGGTCCATGCAATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTa                                                                                          <  2:1511400/140‑1 (MQ=255)                                            tCATTACCTTTCCCCTGGTTAGACGCGGCGTATTCCTGCCGCAGGCCCGTTTTCAGCCGGGTTCCCAGCGTCGTCCCGTTTGGCGGGCCCAGGCGATCGGTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTAtt                                                                                        <  2:1352840/140‑1 (MQ=255)                                                 accTTTCCCCTGGTTAGAATCGGCGTTTTCCTGACGCCCGGCCGTTTTCAGCCGGGGTTCCAGCGTCGTACCGTTTTGCGGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCca                                                                                   <  2:376418/138‑1 (MQ=255)                                                      tCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATcc                                                                              >  1:927522/1‑140 (MQ=255)                                                      tCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATcc                                                                              >  2:446587/1‑140 (MQ=255)                                                       cACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCcg                                                                             >  1:471670/1‑140 (MQ=255)                                                             gtaaGAATGGGCTTTTCCCTGACGCGCGCCCGTTTCCAGCCGGGTTCCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCa                                                                       <  2:1623609/137‑1 (MQ=255)                                                             gTTAGACTCGGCGTATTCCTGACGCCCGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCa                                                                       <  2:834157/140‑1 (MQ=255)                                                             gTTAGAATCGGCGTTTTCGTGCCCCCCGGCCGCTTCCAGCCGGGGTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCa                                                                       <  2:43768/140‑1 (MQ=255)                                                             gTTAGAATCGGCGTTTTCCTGACGCCCGCCCGCTTTCAGCCGGGGTCCCAGCGTCGTCCCTTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCa                                                                       <  2:107785/140‑1 (MQ=255)                                                             gTTAGAATCGGCGTTTCCCTGCCGCCCGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCa                                                                       <  2:750440/140‑1 (MQ=255)                                                             gTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCa                                                                       >  1:1409057/1‑140 (MQ=255)                                                               tAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATg                                                                     <  2:1176747/140‑1 (MQ=255)                                                                 gAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGcc                                                                   <  1:315891/140‑1 (MQ=255)                                                                   aTCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGt                                                                 >  1:1016992/1‑140 (MQ=255)                                                                    tCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGtt                                                                >  2:1474072/1‑140 (MQ=255)                                                                       gCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGa                                                             >  2:1563838/1‑140 (MQ=255)                                                                         gttttCCTGCCGCCCGGCCGCTTTCGGCCGGGGTCCCAGCGTCGTCCCGTTTTGCGGGTCCATGCGATAGTTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATa                                                           <  2:725000/137‑1 (MQ=255)                                                                         gTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATa                                                           <  1:1265998/140‑1 (MQ=255)                                                                              ccTGACGCACGGCCGTTTTCAGCCAGGGTTCCGGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACgtg                                                      <  2:149020/140‑1 (MQ=255)                                                                              ccTGACGCACGCCCGCTTTCAGCCGGGGTCCCAGCGTCGTCCCTTTTTGCAGGCCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACgtg                                                      <  2:930529/140‑1 (MQ=255)                                                                                 gccGCACGGCCGCTTCCGGCCGGGGTTCCGGCGTCGTCCCGTTTGGCAGGCCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAg                                                   <  2:1289410/138‑1 (MQ=255)                                                                                 gACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAg                                                   >  2:952907/1‑140 (MQ=255)                                                                                    gCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTcc                                                >  1:1275120/1‑140 (MQ=255)                                                                                      aCGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTg                                              >  2:1412345/1‑140 (MQ=255)                                                                                      aCGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTg                                              >  1:1413966/1‑140 (MQ=255)                                                                                       cgcccGCTTTCAGCCAGGGTCCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGa                                             <  2:963404/137‑1 (MQ=255)                                                                                       cGGCCGCTTTCGGCCGGGTTCCCAGCGTCGTCCCTTTTTGCAGTCCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGa                                             <  2:282832/140‑1 (MQ=255)                                                                                       cGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTCCCGTTTTGCGGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGa                                             <  2:894600/140‑1 (MQ=255)                                                                                        ggCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCGGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGAc                                            <  2:817579/140‑1 (MQ=255)                                                                                         gCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGAcc                                           <  1:1286009/140‑1 (MQ=255)                                                                                              tttCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGAGCATCtg                                      >  2:1188201/1‑140 (MQ=255)                                                                                                  ggCCGGGGTTCCAGCGTCGTCCCGTTTTGCAGGCCCATGCGATAGCTTCCCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGt                                  <  2:137549/139‑1 (MQ=255)                                                                                                   gCCAGGTTTCCAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTa                                 <  1:1387006/140‑1 (MQ=255)                                                                                                        ggTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGcc                            >  2:1542867/1‑140 (MQ=255)                                                                                                        ggTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGcc                            >  1:656756/1‑140 (MQ=255)                                                                                                        ggTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGcc                            >  2:867520/1‑140 (MQ=255)                                                                                                        ggTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGcc                            >  2:391735/1‑140 (MQ=255)                                                                                                        ggTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGcc                            >  1:1074725/1‑140 (MQ=255)                                                                                                        ggTTCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGcc                            >  2:625674/1‑140 (MQ=255)                                                                                                           tCCAGCGTCGTACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGt                         <  1:568388/140‑1 (MQ=255)                                                                                                           cccAGCGTCGTCCCTTTTGGCAGGTCCAGGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGt                         <  2:1335919/139‑1 (MQ=255)                                                                                                            ccAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTa                        <  2:11426/140‑1 (MQ=255)                                                                                                            ccAGCGTCGTCCCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTa                        <  1:151247/140‑1 (MQ=255)                                                                                                                  tcgtACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGcc                  >  2:1070201/1‑140 (MQ=255)                                                                                                                    gtACCGTTTTGCTGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGCATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAg                >  2:936904/1‑140 (MQ=255)                                                                                                                     tACCGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGa               <  1:1542867/140‑1 (MQ=255)                                                                                                                     ccccGTTTGGCGGGCCCAGGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGa               <  2:278868/138‑1 (MQ=255)                                                                                                                       ccGTTTTGCGGGCCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATa             <  1:1640982/140‑1 (MQ=255)                                                                                                                       ccGTTTTGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATa             <  1:438693/140‑1 (MQ=255)                                                                                                                            ttGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATAGGGTc        <  2:1016992/140‑1 (MQ=255)                                                                                                                             tGCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATAGGGTCt       >  1:104033/1‑140 (MQ=255)                                                                                                                              gCAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATAGGGTCTa      >  1:427294/1‑140 (MQ=255)                                                                                                                               cAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATAGGGTCTaa     >  2:1040138/1‑140 (MQ=255)                                                                                                                               cAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATAGGGTCTaa     >  1:809903/1‑140 (MQ=255)                                                                                                                               cAGGTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATAGGGTCTaa     >  1:1250812/1‑140 (MQ=255)                                                                                                                                  gTCCATGCGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGCAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATAGGGTCTAacac  >  1:1023040/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                     AACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCATGTGATAGCTTACCGCCGTTCCCGCTTCAGCGCGTAATATCCGGGTATTTCCCACATCCGCGCGCATGCCGTTTGATAACGTGTAGTCCTGACCATCTGTGGTAAAGCCGGTAAAGGCCAGATAGGGTCTAACAC  >  NC_000913/2286516‑2286784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑