| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,719,182 | T→C | intergenic (+28/‑41) | trxC → / → yfiP | reduced thioredoxin 2/conserved protein YfiP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,719,182 | 0 | T | C | 98.9% | 321.6 / ‑4.6 | 87 | intergenic (+28/‑41) | trxC/yfiP | reduced thioredoxin 2/conserved protein YfiP |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (45/41); total (45/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.99e-01 | |||||||||||
TCGTAGTATACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGTTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCGCGTTCGTCGCTGCCA > NC_000913/2719046‑2719317 | tCGTAGTATACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGcttt < 1:488568/140‑1 (MQ=255) cGTAGTATACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTtc < 1:682088/140‑1 (MQ=255) cGTAGTATACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTtc < 2:683482/140‑1 (MQ=255) cGTAGTATACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTtc > 2:329238/1‑140 (MQ=255) gtagtaTACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTtct > 1:90331/1‑140 (MQ=255) agtaTACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTctcc > 2:617462/1‑140 (MQ=255) tataCCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTctcctc < 1:592264/140‑1 (MQ=255) aCCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGc > 2:1249855/1‑140 (MQ=255) ccGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCg < 1:398498/140‑1 (MQ=255) ccGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCg > 1:377533/1‑140 (MQ=255) cgacgaTCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGa > 2:936263/1‑140 (MQ=255) cgacgaTCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGGGCCCCGCTTTCTCCTCTGCGa > 1:1087880/1‑140 (MQ=255) acgaTCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACa > 2:483960/1‑140 (MQ=255) acgaTCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACa > 1:1573690/1‑140 (MQ=255) cgaTCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACaa > 2:1574166/1‑140 (MQ=255) cgaTCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGACTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACaa > 2:1270375/1‑140 (MQ=255) aTCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATg > 2:1330553/1‑140 (MQ=255) aTCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATg > 1:1033894/1‑140 (MQ=255) cATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGc > 1:70957/1‑140 (MQ=255) tGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGt > 1:1221468/1‑140 (MQ=255) tttCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGttttt > 2:397448/1‑140 (MQ=255) cAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCg < 2:1066310/140‑1 (MQ=255) cAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCg > 2:1497829/1‑140 (MQ=255) aaaaaCGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGa < 1:1295175/140‑1 (MQ=255) aaaCGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACg < 2:1000876/140‑1 (MQ=255) aaCGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGTTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGc < 1:1495114/140‑1 (MQ=255) aaCGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGc < 2:965624/140‑1 (MQ=255) aaCGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGc < 2:51730/140‑1 (MQ=255) aCGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGct < 1:712760/140‑1 (MQ=255) aCGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGct < 2:173823/140‑1 (MQ=255) aCGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGct < 1:65562/140‑1 (MQ=255) aCGGTCAGGTTGTCCACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAGTCTCATTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGct < 2:404272/140‑1 (MQ=255) aGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTa < 1:977810/140‑1 (MQ=255) aGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTa < 1:1622303/140‑1 (MQ=255) gTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATg < 1:1229530/140‑1 (MQ=255) tCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCg > 1:73239/1‑140 (MQ=255) tGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACg > 2:1075563/1‑140 (MQ=255) tGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACg < 1:1635236/140‑1 (MQ=255) tGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACg < 2:1087880/140‑1 (MQ=255) tGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACg > 2:232815/1‑140 (MQ=255) ttAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTg < 2:897637/140‑1 (MQ=255) cgcAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCa > 2:22239/1‑140 (MQ=255) cgcAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCa > 1:397734/1‑140 (MQ=255) cAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGt > 1:1101773/1‑140 (MQ=255) cAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGt > 2:826020/1‑140 (MQ=255) aGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTTGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGtt > 2:1482677/1‑140 (MQ=255) aGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGCTTTTTCGACGCGCTCTTGTGACCGAAAACGCTGTTCTCCAGtt > 2:1618941/1‑140 (MQ=255) tACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTAc > 1:1481170/1‑140 (MQ=255) ccGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTAcgc < 1:1159458/140‑1 (MQ=255) gAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACgcgc < 2:70957/140‑1 (MQ=255) gAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACgcgc < 1:1330553/140‑1 (MQ=255) gAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACgcgc < 1:1497829/140‑1 (MQ=255) gAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACgcgc < 1:483960/140‑1 (MQ=255) gAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACgcgc < 1:617462/140‑1 (MQ=255) gAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACgcgc < 1:487403/140‑1 (MQ=255) aaaGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGcc > 1:185077/1‑140 (MQ=255) aGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGa > 1:42690/1‑140 (MQ=255) gcCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCAACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCg > 1:1212915/1‑140 (MQ=255) cGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTa > 1:203241/1‑140 (MQ=255) tCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTg < 1:1090807/140‑1 (MQ=255) cGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTgc < 1:232815/140‑1 (MQ=255) cGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTgc < 1:1075563/140‑1 (MQ=255) ggctgAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCaa > 1:259778/1‑140 (MQ=255) ggctgAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGAGCGCaa > 2:1190774/1‑140 (MQ=255) gctgAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAac > 1:1568889/1‑140 (MQ=255) gctgAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAac > 1:1141178/1‑140 (MQ=255) ctgAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAaca < 2:1010936/140‑1 (MQ=255) gAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACg < 2:147899/140‑1 (MQ=255) gAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACg < 2:377533/140‑1 (MQ=255) gAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACg < 1:473659/140‑1 (MQ=255) gAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACg < 2:240934/140‑1 (MQ=255) aaCGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGt > 1:574323/1‑140 (MQ=255) aaCGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGt > 2:89488/1‑140 (MQ=255) aCGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTc < 2:1185053/140‑1 (MQ=255) gAATCTCTTTAATCTTACCGGGACGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCt > 1:886762/1‑140 (MQ=255) tctcTTTAATCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTTTGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCtttt > 1:1026345/1‑140 (MQ=255) tttAATCTTGCCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTg < 2:1514337/140‑1 (MQ=255) aTCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCcg < 2:1574880/140‑1 (MQ=255) aTCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCcg < 2:1481170/140‑1 (MQ=255) aTCTTACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCcg < 2:73239/140‑1 (MQ=255) tACCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGt < 1:1038472/140‑1 (MQ=255) aCCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTa > 1:1430414/1‑140 (MQ=255) aCCGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTa > 1:906806/1‑140 (MQ=255) ccGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTaa > 1:1619846/1‑140 (MQ=255) ccGGGGCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTaa > 1:529435/1‑140 (MQ=255) ggCGCATCTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATcgc > 2:549097/1‑140 (MQ=255) cTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCGCGTtcgtc < 2:1461435/140‑1 (MQ=255) cTTGTGCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCGCGTtcgtc < 1:22239/140‑1 (MQ=255) tgCCCCGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCGCGTTCGTCGCTg > 1:1069998/1‑140 (MQ=255) ccccGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCGCGTTCGTCGCTGcc > 2:1364698/1‑140 (MQ=255) cccGCTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCGCGTTCGTCGCTGCCa < 2:1182989/140‑1 (MQ=255) | TCGTAGTATACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGTTTTCTCCTCTGCGACAATGGCGTTTTTTCGACGCTCTCTTATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCGCGTTCGTCGCTGCCA > NC_000913/2719046‑2719317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |