BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,969,880	T→C	A73A (GCT→GCC)	mutH →	DNA mismatch repair protein MutH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,969,880	0	T	C	100.0%	434.5 / NA	114	A73A (GCT→GCC)	mutH	DNA mismatch repair protein MutH
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (66/48); total (66/48)

Only 100 of 115 total aligned reads displayed.

GGGAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCTCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGCCACAAACT  >  NC_000913/2969748‑2970011

gggAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCg                                                                                                                              >  2:1021711/1‑140 (MQ=255)

gggAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCg                                                                                                                              >  1:1503239/1‑140 (MQ=255)

gggAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCg                                                                                                                              <  2:742829/140‑1 (MQ=255)

gggAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCg                                                                                                                              <  1:585097/140‑1 (MQ=255)

gggAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCg                                                                                                                              >  2:1540213/1‑140 (MQ=255)

gggAGAACTGACGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCg                                                                                                                              >  2:15404/1‑140 (MQ=255)

 ggAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGt                                                                                                                             >  1:718085/1‑140 (MQ=255)

  gagaACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTg                                                                                                                            <  1:388058/140‑1 (MQ=255)

  gagaACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTg                                                                                                                            <  2:603875/140‑1 (MQ=255)

    gaACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGa                                                                                                                          >  2:238714/1‑140 (MQ=255)

     aaCTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGaa                                                                                                                         >  1:382269/1‑140 (MQ=255)

     aaCTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGaa                                                                                                                         >  1:195624/1‑140 (MQ=255)

      aCTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAAc                                                                                                                        <  2:1267177/140‑1 (MQ=255)

       cTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACt                                                                                                                       >  1:1480141/1‑140 (MQ=255)

           cggcACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTaaa                                                                                                                   >  1:1271939/1‑140 (MQ=255)

               aCTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTa                                                                                                               >  1:476663/1‑140 (MQ=255)

               aCTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTa                                                                                                               <  1:1302547/140‑1 (MQ=255)

               aCTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTa                                                                                                               <  2:150143/140‑1 (MQ=255)

                   gTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATccc                                                                                                           >  2:823029/1‑140 (MQ=255)

                    tCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCt                                                                                                          <  1:96453/140‑1 (MQ=255)

                    tCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCt                                                                                                          <  1:299412/140‑1 (MQ=255)

                    tCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCt                                                                                                          <  1:289618/140‑1 (MQ=255)

                    tCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCt                                                                                                          >  2:1633266/1‑140 (MQ=255)

                        gCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTgg                                                                                                      <  1:1507261/140‑1 (MQ=255)

                        gCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTgg                                                                                                      <  2:553379/140‑1 (MQ=255)

                          tGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGAt                                                                                                    <  1:63620/140‑1 (MQ=255)

                          cggTTCCGCCAGAGAATTTAAAACGGGAAAAAGGCCGGAATGGGCTGTTACCGGAGATCCGGCTAGGTGCCAGCCCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGAt                                                                                                    <  2:764221/139‑1 (MQ=255)

                                      agaATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGgtcgt                                                                                        >  1:1103543/1‑140 (MQ=255)

                                         aTTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCg                                                                                     <  1:1021711/140‑1 (MQ=255)

                                         aTTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCg                                                                                     <  2:119926/140‑1 (MQ=255)

                                           ttAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCt                                                                                   <  1:1633266/140‑1 (MQ=255)

                                                 cgcgATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAaac                                                                             <  2:718085/140‑1 (MQ=255)

                                                  gcgATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAaaca                                                                            >  2:1434788/1‑140 (MQ=255)

                                                  gcgATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAaaca                                                                            >  2:1508621/1‑140 (MQ=255)

                                                  gcgATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAaaca                                                                            >  1:1300655/1‑140 (MQ=255)

                                                  gcgATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAaaca                                                                            <  1:359622/140‑1 (MQ=255)

                                                       aaaGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACAtt                                                                       <  1:771368/140‑1 (MQ=255)

                                                       aaaGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACAtt                                                                       <  2:1015559/140‑1 (MQ=255)

                                                          ggCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGt                                                                    <  2:654175/140‑1 (MQ=255)

                                                          ggCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGt                                                                    <  2:1542230/140‑1 (MQ=255)

                                                          ggCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGt                                                                    <  2:1503239/140‑1 (MQ=255)

                                                          ggCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGt                                                                    <  2:1411585/140‑1 (MQ=255)

                                                          ggCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGt                                                                    <  1:680749/140‑1 (MQ=255)

                                                          ggCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGt                                                                    <  2:382269/140‑1 (MQ=255)

                                                          ggCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGt                                                                    <  1:1476457/140‑1 (MQ=255)

                                                              ggATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTtgt                                                                >  2:8594/1‑140 (MQ=255)

                                                                aTTGGCGTGTTACTGGAGATCTGGCTAGGTGTCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTgtgt                                                              <  1:1356801/140‑1 (MQ=255)

                                                                 ttGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGtt                                                             <  1:328639/140‑1 (MQ=255)

                                                                     cGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGccc                                                         <  2:1372262/140‑1 (MQ=255)

                                                                     cGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGccc                                                         >  2:1316571/1‑140 (MQ=255)

                                                                        gtTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGt                                                      <  1:465247/140‑1 (MQ=255)

                                                                         ttACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGtt                                                     >  2:1013240/1‑140 (MQ=255)

                                                                          tACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTa                                                    <  2:1360950/140‑1 (MQ=255)

                                                                                 gaTCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCa                                             >  1:594927/1‑140 (MQ=255)

                                                                                 gaTCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCa                                             >  1:800638/1‑140 (MQ=255)

                                                                                  aTCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCaa                                            >  2:1050285/1‑140 (MQ=255)

                                                                                  aTCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCaa                                            >  2:1192978/1‑140 (MQ=255)

                                                                                    cTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGTCCCGTTAACGGGCAATa                                          >  1:1248341/1‑140 (MQ=255)

                                                                                    cTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATa                                          >  1:1185503/1‑140 (MQ=255)

                                                                                    cTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATa                                          >  2:1600524/1‑140 (MQ=255)

                                                                                    cTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATa                                          <  2:1309630/140‑1 (MQ=255)

                                                                                    cTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATa                                          >  2:171116/1‑140 (MQ=255)

                                                                                    cTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATa                                          >  2:1011269/1‑140 (MQ=255)

                                                                                      ggCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGc                                        >  1:683554/1‑140 (MQ=255)

                                                                                      ggCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGc                                        >  2:710953/1‑140 (MQ=255)

                                                                                       gCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCg                                       >  1:1482779/1‑140 (MQ=255)

                                                                                         tAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCggg                                     <  2:1300655/140‑1 (MQ=255)

                                                                                         tAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCggg                                     <  1:800435/140‑1 (MQ=255)

                                                                                           ggTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGt                                   <  2:329334/140‑1 (MQ=255)

                                                                                           ggTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGt                                   >  1:994889/1‑140 (MQ=255)

                                                                                            gTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTg                                  >  2:1125805/1‑140 (MQ=255)

                                                                                            gTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTg                                  >  2:439022/1‑140 (MQ=255)

                                                                                             tGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGa                                 >  1:1185311/1‑140 (MQ=255)

                                                                                               ccAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGAcc                               >  1:282182/1‑140 (MQ=255)

                                                                                                 aGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGACACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTg                             >  1:520244/1‑140 (MQ=255)

                                                                                                 aGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTg                             >  1:1163407/1‑140 (MQ=255)

                                                                                                 aGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTg                             >  2:190375/1‑140 (MQ=255)

                                                                                                 aGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTg                             >  1:1254668/1‑140 (MQ=255)

                                                                                                 aGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGCCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTg                             <  2:476663/140‑1 (MQ=255)

                                                                                                 aGCGCAGGGAGTAAACCTGAGCAAGATTTT‑CTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTgg                            >  1:936229/1‑140 (MQ=255)

                                                                                                  gcgcAGGGGGTAAACTTGAGCAAGATTTTGTTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGATACAACATTCTTTTGGGTTGCCCCGTTATCGGGCATTAGCGGGGTGACCTgg                            >  2:1020755/1‑140 (MQ=255)

                                                                                                              aaCCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCAc                >  1:912434/1‑140 (MQ=255)

                                                                                                              aaCCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCAc                <  2:263138/140‑1 (MQ=255)

                                                                                                               aCCTGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACg               >  2:1157251/1‑140 (MQ=255)

                                                                                                                  tGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgc            >  1:1277684/1‑140 (MQ=255)

                                                                                                                  tGAGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgc            >  2:1503620/1‑140 (MQ=255)

                                                                                                                    aGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgcgc          >  1:1096748/1‑140 (MQ=255)

                                                                                                                    aGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgcgc          >  2:414775/1‑140 (MQ=255)

                                                                                                                    aGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgcgc          >  2:370193/1‑140 (MQ=255)

                                                                                                                    aGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgcgc          >  2:307240/1‑140 (MQ=255)

                                                                                                                    aGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgcgc          >  2:285397/1‑140 (MQ=255)

                                                                                                                    aGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgcgc          >  1:1393764/1‑140 (MQ=255)

                                                                                                                    aGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgcgc          >  1:182367/1‑140 (MQ=255)

                                                                                                                    aGCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTgcgc          >  1:576307/1‑140 (MQ=255)

                                                                                                                     gCAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGcc         >  2:1149524/1‑140 (MQ=255)

                                                                                                                      cAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGCca        >  2:420225/1‑140 (MQ=255)

                                                                                                                      cAAGATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGCca        >  2:1344933/1‑140 (MQ=255)

                                                                                                                         gATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGCCACaa     >  2:1319545/1‑140 (MQ=255)

                                                                                                                         gATTTTGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGCCACaa     >  1:504076/1‑140 (MQ=255)

                                                                                                                            tttGCTGCCCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGCCACAAACt  <  1:1110565/140‑1 (MQ=255)

GGGAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCTCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGCCACAAACT  >  NC_000913/2969748‑2970011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`