Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	286,570	C→T	S392S (AGC→AGT)	yagG →	putative D‑xylonate transporter YagG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	286,570	0	C	T	100.0%	190.6 / NA	56	S392S (AGC→AGT)	yagG	putative D‑xylonate transporter YagG
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (16/40);  total (16/40)

CTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATC  >  NC_000913/286435‑286702                                                                                                                                        |                                                                                                                                     cTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGGGGGCCGGGTCCTGGCGTGCGTCAACCATTCCGCcagtagca                                                                                                                                  >  2:1048279/1‑140 (MQ=255)   aCGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGGGGGGGGCTGGATCCTGGCGGACGTCAACTATTCCGCCagtagcagc                                                                                                                                >  2:439437/1‑140 (MQ=255)    cGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGGACGTCAACTATTCCGCCAGTAGCAGCg                                                                                                                               >  1:244553/1‑140 (MQ=255)         agagCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGGGGTGGGGTGGATCCTGGCGTACGTCAACGATTCCGCCAGGAGCAGCGTGCAg                                                                                                                          >  1:785462/1‑140 (MQ=255)         agagCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGGGGGGGGCTGGGTCCCGGCGTACGTCCACTATTCCGCCCGTAGCAGCGGGccg                                                                                                                          >  2:1174713/1‑138 (MQ=255)          gagCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGc                                                                                                                         <  2:649029/140‑1 (MQ=255)          gagCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGGGGGGGGGTGGGTCCTGGCGGGCGTCCACTATTCCGCCAGTAGCAGCGGGCAGc                                                                                                                         >  2:1579060/1‑140 (MQ=255)          gagCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGGGGGGGGCTGGGTCCTGGCGTACGTCAACTATTTCGCCCGTAGCAGCGGGCAGc                                                                                                                         >  2:1545332/1‑140 (MQ=255)           ggCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGTAGCGTGCAGcc                                                                                                                        <  1:1085769/139‑1 (MQ=255)            gCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGGGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCg                                                                                                                       >  1:973418/1‑140 (MQ=255)                cAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGGGGGGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCCGTAGCAGCGGGCAGCCGGGTg                                                                                                                   >  2:691430/1‑140 (MQ=255)                  gCGGTCGTCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAg                                                                                                                 <  1:1387204/140‑1 (MQ=255)                  gCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAg                                                                                                                 <  1:1554329/140‑1 (MQ=255)                     gTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGGGGGCCGGGTCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGGGCAGCCGGGTgggggg                                                                                                              >  2:588264/1‑138 (MQ=255)                        gccgccTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTc                                                                                                           >  1:391820/1‑140 (MQ=255)                          cgccTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTcac                                                                                                         <  2:558371/140‑1 (MQ=255)                          cgccTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTcac                                                                                                         <  2:1273648/140‑1 (MQ=255)                          cgccTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTcac                                                                                                         <  2:1018703/140‑1 (MQ=255)                           gccTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTcacc                                                                                                        <  1:1325632/140‑1 (MQ=255)                             cTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTcaccac                                                                                                      <  1:830872/140‑1 (MQ=255)                                          tgtTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAAttctg                                                                                         <  1:170302/140‑1 (MQ=255)                                               tcCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAAttctgttctg                                                                                    >  1:1405457/1‑140 (MQ=255)                                                  ccctacctGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCgt                                                                                 <  2:1237063/139‑1 (MQ=255)                                                  ccctacctGTTCAGCCCGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCgt                                                                                 <  1:1362039/139‑1 (MQ=255)                                                  acctacctGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCgt                                                                                 <  1:1631182/140‑1 (MQ=255)                                                  acctacctGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCgt                                                                                 <  2:156243/140‑1 (MQ=255)                                                       cctGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGc                                                                            <  2:1348283/140‑1 (MQ=255)                                                       cctGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGc                                                                            <  1:107400/140‑1 (MQ=255)                                                        ctGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCCGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGcc                                                                           >  1:42060/1‑140 (MQ=255)                                                            tCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCggtg                                                                       <  1:1579060/140‑1 (MQ=255)                                                            tCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCggtg                                                                       <  1:638068/140‑1 (MQ=255)                                                             cAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGGGGGCTGGATCCTGGCGGACGTCAACTATTCCGCCCGTAGCAGCGGGCAGCCGGGTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCggggg                                                                      >  2:1521921/1‑140 (MQ=255)                                                                ccTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGGAGCAGCGTGCCGCCGGGTGAGGTGGTCACCACCATCAAAATTTTGTTCTTCGGGGTGCCGGTGGGGc                                                                   >  2:1379136/1‑140 (MQ=255)                                                                ccTGAAGATTGGCCTGGCGATTGGCGGGGCGGGGGGGGGCTGGGGCCTGGCGTACGGCAACTATTTCGCCCCGAGCAGCGCGGAGCCGGGTGAGGGGGTCACCACCATCAAAATTCTGTTCTGCGTGGGGGCGGGGGGGc                                                                   >  2:1548740/1‑140 (MQ=255)                                                                ccTGAAGATTGGCCTGGCGATTGGCGGGGCGGGGGGGGGCTGGATCCTGGCGGACGTCAACTATTCCCCCAGTAGCAGCGTGCAGCCGGGTGAGGGGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGGGGGGc                                                                   >  2:115388/1‑140 (MQ=255)                                                                 cTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGct                                                                  <  2:973418/140‑1 (MQ=255)                                                                  tGAAGATTGGCCTGGCGATTGGCGGGGCGGGGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGGTGAGGGGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGctc                                                                 >  2:730460/1‑140 (MQ=255)                                                                  tGAAGATTGGCCTGGCGATTGGCGGGGCGGCGGTGGGCTGGATCCTGGGGCACGTCAACTATTCCGCCAATAGCAGCGTGCAGCCCGGTGAGGTGCTCACCCCCCTCCAAATTCTGTTCCCCCTGGGGCCGGGGGGGctc                                                                 >  2:166690/1‑140 (MQ=255)                                                                      gATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTAcg                                                             <  1:1312011/140‑1 (MQ=255)                                                                      gATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTAcg                                                             <  2:1405095/140‑1 (MQ=255)                                                                      gATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTAcg                                                             <  1:1022410/140‑1 (MQ=255)                                                                        ttGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTAcgcg                                                           <  1:439437/140‑1 (MQ=255)                                                                           gCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGc                                                        <  2:502109/140‑1 (MQ=255)                                                                           gCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGc                                                        <  1:691430/140‑1 (MQ=255)                                                                             cTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCAt                                                      <  1:1466943/140‑1 (MQ=255)                                                                             cTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCAt                                                      <  2:920914/140‑1 (MQ=255)                                                                             cTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCAt                                                      <  1:1174713/140‑1 (MQ=255)                                                                             cTGGCGATTGGCGGGGCGGTGGTGGGATGGATCGTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCAt                                                      <  2:785462/140‑1 (MQ=255)                                                                                 cGATTGGCGGGGCGGTGGGGGGCTGGATCCTGGCGGACGTCAACTATTCCGCCCGTAGCAGCGGGCAGCCGGGTGAGGGGCTCCCCACCCTCCAAAATCTGTTCTGCGGGGGGCCGGGGGGGCTCTACCCCGGCATGTtc                                                  >  2:1193883/1‑140 (MQ=255)                                                                                      ggcggggcggTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCCCCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTcatcat                                             <  2:460947/140‑1 (MQ=255)                                                                                           ggcggTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGt                                        <  2:1405457/140‑1 (MQ=255)                                                                                           ggcggTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCAGGCATGTTCATCATGCTGt                                        <  2:944737/140‑1 (MQ=255)                                                                                           ggcggTGGTGGGCTGCATCCTGGCGTACGTCAACTATGCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGt                                        <  1:758738/140‑1 (MQ=255)                                                                                             cggTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCg                                      <  1:1048279/140‑1 (MQ=255)                                                                                                     ggCTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACaa                              >  1:911554/1‑140 (MQ=255)                                                                                                       cTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGc                            <  1:1548740/140‑1 (MQ=255)                                                                                                       cTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGc                            <  1:1379136/140‑1 (MQ=255)                                                                                                       cTGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGc                            <  2:391820/140‑1 (MQ=255)                                                                                                        tGGATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCt                           >  1:1594113/1‑140 (MQ=255)                                                                                                          gATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTc                                       <  2:994454/126‑1 (MQ=255)                                                                                                          gATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTc                                       >  1:994454/1‑126 (MQ=255)                                                                                                          gATCCTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCa                         >  1:1323076/1‑140 (MQ=255)                                                                                                              cTGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGa                     <  1:115388/140‑1 (MQ=255)                                                                                                               tGGCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACAATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGAt                    >  2:1235783/1‑140 (MQ=255)                                                                                                                ggCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATg                   >  2:707040/1‑140 (MQ=255)                                                                                                                 gCGTACGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGc                  >  1:1358244/1‑140 (MQ=255)                                                                                                                      cGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCcgcg             >  1:831972/1‑140 (MQ=255)                                                                                                                      cGTCAACTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCcgcg             >  1:42096/1‑140 (MQ=255)                                                                                                                           aCTATTCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAg        >  2:1525422/1‑140 (MQ=255)                                                                                                                               ttCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCa    >  2:775204/1‑140 (MQ=255)                                                                                                                                tCCGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCAt   <  1:937976/140‑1 (MQ=255)                                                                                                                                 ccGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGTCATc  >  1:230586/1‑140 (MQ=255)                                                                                                                                 ccGCCAGTAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATc  >  2:353558/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                     CTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATC  >  NC_000913/286435‑286702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑