| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,210,329 | T→C | D72G (GAC→GGC) | tsaD ← | N(6)‑L‑threonylcarbamoyladenine synthase, TsaD subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,210,329 | 0 | T | C | 99.3% | 526.6 / ‑5.5 | 140 | D72G (GAC→GGC) | tsaD | N(6)‑L‑threonylcarbamoyladenine synthase, TsaD subunit |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (96/43); total (97/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
ACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAATTGGTT > NC_000913/3210195‑3210465 | tGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGt > 1:547489/1‑140 (MQ=255) ttCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAAc < 2:644506/140‑1 (MQ=255) atatGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGa > 1:1642646/1‑140 (MQ=255) tatGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGAc < 2:131126/140‑1 (MQ=255) tatGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGAc < 1:1078156/140‑1 (MQ=255) atGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATATGCCACAGCATCAATGCCGTTTGCCGTTAAACTAGACt > 1:1003075/1‑140 (MQ=255) tgtACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCtt > 1:118555/1‑140 (MQ=255) tgtACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCtt > 1:1248354/1‑140 (MQ=255) tgtACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCtt > 1:340035/1‑140 (MQ=255) tgtACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCtt > 2:615159/1‑140 (MQ=255) tACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTa > 1:764006/1‑140 (MQ=255) tACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTa > 2:273400/1‑140 (MQ=255) tACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTa > 1:1619209/1‑140 (MQ=255) tACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTa > 2:1448489/1‑140 (MQ=255) tACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTa > 2:794060/1‑140 (MQ=255) tACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTa > 1:982190/1‑140 (MQ=255) tACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTa > 2:263054/1‑140 (MQ=255) tACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTa > 1:1555958/1‑140 (MQ=255) aCAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAg > 2:456327/1‑140 (MQ=255) cAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAgc > 2:836806/1‑140 (MQ=255) aGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAgcg < 1:1433559/140‑1 (MQ=255) aGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAgcg < 2:44189/140‑1 (MQ=255) aGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACACCTTTAgcg < 2:1554055/140‑1 (MQ=255) ggATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGcgcc > 2:292126/1‑140 (MQ=255) gATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGcgccg > 1:777136/1‑140 (MQ=255) aTCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGcgccgc > 1:835570/1‑140 (MQ=255) aTCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGcgccgc > 1:104021/1‑140 (MQ=255) aTCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGcgccgc > 2:778283/1‑140 (MQ=255) aTCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGcgccgc > 1:1433229/1‑140 (MQ=255) tCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCgccgcc > 2:1416667/1‑140 (MQ=255) tCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCgccgcc > 1:1094191/1‑140 (MQ=255) tCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCgccgcc > 2:69920/1‑140 (MQ=255) tCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCgccgcc > 2:239904/1‑140 (MQ=255) tCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCgccgcc > 1:990819/1‑140 (MQ=255) gCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTg > 1:29759/1‑140 (MQ=255) gCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTg > 1:1151956/1‑140 (MQ=255) gCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTg > 1:1185018/1‑140 (MQ=255) gCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTg > 2:483027/1‑140 (MQ=255) gCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTg > 1:1360114/1‑140 (MQ=255) gCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTg > 2:707604/1‑140 (MQ=255) gCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTg > 2:1372772/1‑140 (MQ=255) ccGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTgg < 1:660601/140‑1 (MQ=255) aaCGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCa > 2:1580627/1‑140 (MQ=255) cGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAac > 2:1317334/1‑140 (MQ=255) gCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAacggtacggt > 2:822373/1‑140 (MQ=255) gCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAacggtacggt > 1:156112/1‑140 (MQ=255) aCGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTa > 2:1480443/1‑140 (MQ=255) aCGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTa > 1:201971/1‑140 (MQ=255) cGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTAc > 1:821631/1‑140 (MQ=255) agagAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGcac > 1:38997/1‑140 (MQ=255) cccACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATcgcg > 2:410606/1‑140 (MQ=255) gTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGc < 2:340035/140‑1 (MQ=255) gTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGc < 1:483027/140‑1 (MQ=255) gcgcCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAg > 1:301124/1‑140 (MQ=255) cgcCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGt > 1:86787/1‑140 (MQ=255) cgcCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGt > 1:532685/1‑140 (MQ=255) cgcCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGt > 1:304020/1‑140 (MQ=255) gcgcgcCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAACCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCacgacg < 1:411258/140‑1 (MQ=255) gcgcgcCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCacgacg < 1:614835/140‑1 (MQ=255) gcgcgcCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCacgacg < 2:1248354/140‑1 (MQ=255) gcgcgcCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCacgacg < 1:456327/140‑1 (MQ=255) cgcCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGAcgccg > 2:587263/1‑140 (MQ=255) cgcCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAAGCACGAcgccg > 2:1199527/1‑140 (MQ=255) ccGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACgccgcc > 1:610787/1‑140 (MQ=255) gACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGt < 1:1448489/140‑1 (MQ=255) gggCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTg < 2:1619209/140‑1 (MQ=255) ggCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGc > 2:941872/1‑140 (MQ=255) ggCCTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGc < 1:69920/140‑1 (MQ=255) cTGCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAAt < 2:118555/140‑1 (MQ=255) gCGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAAttt > 1:678242/1‑140 (MQ=255) cGGTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGGCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTc > 1:1483741/1‑140 (MQ=255) ggTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCa < 2:45248/140‑1 (MQ=255) ggTATAGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCa < 2:642011/140‑1 (MQ=255) tataGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAcc < 1:1480443/140‑1 (MQ=255) ataGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCt < 2:532685/140‑1 (MQ=255) ataGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCt < 1:1317334/140‑1 (MQ=255) ataGGCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCt < 1:776692/140‑1 (MQ=255) ggCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGAc < 2:771194/140‑1 (MQ=255) gCCACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACt > 2:1615185/1‑140 (MQ=255) ccACAGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACta < 1:1013373/140‑1 (MQ=255) cacaGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACtat > 2:27834/1‑140 (MQ=255) cacaGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGCACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACtat > 1:474336/1‑140 (MQ=255) cacaGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGCACGGTTTTACCCACATGCTCGCGGGAGGCCAGTTCAAGCACGCCGCCGCCGCAGTCAGCGTGCAATTTCACCTGACtat > 2:12524/1‑140 (MQ=255) aGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACa > 1:1510311/1‑140 (MQ=255) aGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACa > 1:1615797/1‑140 (MQ=255) aGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACa > 1:761611/1‑140 (MQ=255) aGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACa > 1:1263653/1‑140 (MQ=255) aGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACa > 2:939046/1‑140 (MQ=255) aGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACa > 1:868847/1‑140 (MQ=255) aGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACa > 2:1001505/1‑140 (MQ=255) aGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACa > 2:1035800/1‑140 (MQ=255) aGCATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACa > 2:1045385/1‑140 (MQ=255) cATCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGACACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAAt > 2:1362831/1‑140 (MQ=255) tCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAAttg > 1:365230/1‑140 (MQ=255) tCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAAttg > 2:1142402/1‑140 (MQ=255) tCAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAAttg > 2:221552/1‑140 (MQ=255) cAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAAttgg < 1:794060/140‑1 (MQ=255) cAATGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAAttgg > 2:318646/1‑140 (MQ=255) aaTGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAAttggt > 2:1523633/1‑140 (MQ=255) aTGCCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAAttggtt > 2:488583/1‑140 (MQ=255) | ACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCACCTGACTATACAATTGGTT > NC_000913/3210195‑3210465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |