Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,822,373	C→T	R90C (CGT→TGT)	rpoZ →	RNA polymerase subunit omega

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,822,373	0	C	T	100.0%	317.0 / NA	92	R90C (CGT→TGT)	rpoZ	RNA polymerase subunit omega
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (44/48);  total (44/48)

TAAAACCACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTCGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCA  >  NC_000913/3822237‑3822509                                                                                                                                         |                                                                                                                                         tAAAACCACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGgttgtc                                                                                                                                       >  2:657843/1‑140 (MQ=255)    aaCCACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGtt                                                                                                                                    >  2:1128246/1‑140 (MQ=255)    aaCCACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGtt                                                                                                                                    <  1:456148/140‑1 (MQ=255)      ccACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTaa                                                                                                                                  <  2:374604/140‑1 (MQ=255)        aCTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATc                                                                                                                                <  2:137748/140‑1 (MQ=255)         cTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATca                                                                                                                               >  1:813844/1‑140 (MQ=255)               tCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGc                                                                                                                         >  1:1291792/1‑140 (MQ=255)                  cgcTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCggg                                                                                                                      >  2:305348/1‑140 (MQ=255)                   gcTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGt                                                                                                                     <  2:786631/140‑1 (MQ=255)                   gcTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGt                                                                                                                     <  1:852522/140‑1 (MQ=255)                   gcTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGt                                                                                                                     <  2:624319/140‑1 (MQ=255)                   gcTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGt                                                                                                                     <  1:1614802/140‑1 (MQ=255)                    cTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTc                                                                                                                    <  1:1161743/140‑1 (MQ=255)                    cTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTc                                                                                                                    <  2:1541341/140‑1 (MQ=255)                    cTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTc                                                                                                                    <  2:370286/140‑1 (MQ=255)                    cTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTc                                                                                                                    >  2:1530335/1‑140 (MQ=255)                    cTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTc                                                                                                                    >  2:441247/1‑140 (MQ=255)                      gcgcGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGc                                                                                                                  <  1:107102/140‑1 (MQ=255)                      gcgcGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGc                                                                                                                  >  1:1428400/1‑140 (MQ=255)                        gcgAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGccc                                                                                                                <  2:988244/140‑1 (MQ=255)                            aaTCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGt                                                                                                            <  2:687743/140‑1 (MQ=255)                            aaTCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGt                                                                                                            <  2:721033/140‑1 (MQ=255)                            aaTCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGt                                                                                                            <  2:1527898/140‑1 (MQ=255)                              tCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTAt                                                                                                          <  2:1493871/140‑1 (MQ=255)                              tCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGAAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTAt                                                                                                          <  2:1124245/140‑1 (MQ=255)                                gaagaaGGTCTGATCAACAACCAGTTCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCt                                                                                                        <  2:883767/140‑1 (MQ=255)                                 aagaagGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTg                                                                                                       >  2:505220/1‑140 (MQ=255)                                 aagaagGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTg                                                                                                       >  2:792291/1‑140 (MQ=255)                                     agGTCGGATCAAAAACTAGACCCTCGCCGTTCGCGAACGCCAGAAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTg                                                                                                   <  2:813844/140‑1 (MQ=255)                                      ggTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGa                                                                                                  <  1:856887/140‑1 (MQ=255)                                      ggTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGa                                                                                                  >  2:92341/1‑140 (MQ=255)                                          tGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGc                                                                                              <  1:1128246/140‑1 (MQ=255)                                            aTCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCt                                                                                            >  2:14983/1‑140 (MQ=255)                                                 cagccAGAGCCTCGACGTTCGCGAACGCCAGGACCAGCAAGAGCAGGAAGCCGCTGATTTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATc                                                                                       <  1:1636788/137‑1 (MQ=255)                                                 caacCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACGAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATc                                                                                       >  2:378465/1‑140 (MQ=255)                                                 caacCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATc                                                                                       >  1:497081/1‑140 (MQ=255)                                                 caacCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATc                                                                                       >  2:842837/1‑140 (MQ=255)                                                 caacCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATc                                                                                       >  1:807657/1‑140 (MQ=255)                                                 caacCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATc                                                                                       >  2:360817/1‑140 (MQ=255)                                                  aacCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCa                                                                                      >  2:613038/1‑140 (MQ=255)                                                   acCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCaa                                                                                     <  1:40780/140‑1 (MQ=255)                                                    ccAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAAc                                                                                    <  1:647180/140‑1 (MQ=255)                                                    ccAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAAc                                                                                    >  1:1092127/1‑140 (MQ=255)                                                    ccAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAAc                                                                                    <  1:92341/140‑1 (MQ=255)                                                      aGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTg                                                                                  >  2:1332558/1‑140 (MQ=255)                                                       gATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGa                                                                                 >  2:1259975/1‑140 (MQ=255)                                                        aTCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGAt                                                                                <  2:749333/140‑1 (MQ=255)                                                        aTCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGAt                                                                                <  1:348626/140‑1 (MQ=255)                                                         tCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATT‑‑‑AGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCaa                                                                            >  2:1234266/1‑140 (MQ=255)                                                         cccTCGACGTTCGCGAACGCCAGAAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGAtt                                                                               <  2:408583/139‑1 (MQ=255)                                                           cTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCa                                                                             >  1:1301685/1‑140 (MQ=255)                                                              gACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAac                                                                          >  2:562785/1‑140 (MQ=255)                                                                 gTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAaccta                                                                       <  2:875465/140‑1 (MQ=255)                                                                   tCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAacctacc                                                                     <  1:1159187/140‑1 (MQ=255)                                                                   tCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAacctacc                                                                     >  1:141949/1‑140 (MQ=255)                                                                    cgcgAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAacctacct                                                                    >  1:1255450/1‑140 (MQ=255)                                                                    cgcgAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAacctacct                                                                    >  1:1620994/1‑140 (MQ=255)                                                                          cGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGa                                                              >  2:1325188/1‑140 (MQ=255)                                                                              aGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGAc                                                          >  1:1030666/1‑140 (MQ=255)                                                                              aGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGAc                                                          <  1:1530335/140‑1 (MQ=255)                                                                                     gCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCa                                                   >  1:1516811/1‑140 (MQ=255)                                                                                     gCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCa                                                   >  1:107300/1‑140 (MQ=255)                                                                                         gagCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCg                                               >  1:1290054/1‑140 (MQ=255)                                                                                           gCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTc                                             >  1:1142874/1‑140 (MQ=255)                                                                                              ggAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGc                                          >  1:71604/1‑140 (MQ=255)                                                                                              ggAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGc                                          >  1:1369679/1‑140 (MQ=255)                                                                                              ggAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGc                                          >  2:328422/1‑140 (MQ=255)                                                                                               gaggCCGCTGAATTGCAGGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCg                                         <  2:494631/137‑1 (MQ=255)                                                                                               gAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCg                                         >  1:392768/1‑140 (MQ=255)                                                                                                aaGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCgg                                        <  1:405466/140‑1 (MQ=255)                                                                                                aaGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCgg                                        <  2:1522426/140‑1 (MQ=255)                                                                                                aaGCCGCTGAATT‑‑‑AGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAg                                     <  1:1234266/140‑1 (MQ=255)                                                                                                       tGAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGt                                 >  1:637529/1‑140 (MQ=255)                                                                                                        gAATTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTa                                <  2:230312/140‑1 (MQ=255)                                                                                                         aaTTACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTAt                               <  2:164125/140‑1 (MQ=255)                                                                                                           ttACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTAtct                             <  2:1255450/140‑1 (MQ=255)                                                                                                           ttACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTAtct                             <  1:1259975/140‑1 (MQ=255)                                                                                                           ttACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTAtct                             <  1:684379/140‑1 (MQ=255)                                                                                                           ttACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGGTAATCACAAAGCGGGTCGCCCTTGTATTTGTTTGAAAGCCTGAATCAGCTGATTCAAGCCTGCCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTAtct                             <  2:1609529/140‑1 (MQ=255)                                                                                                            tACAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTAtctc                            <  1:1059251/140‑1 (MQ=255)                                                                                                              cAAGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGt                          <  1:657843/140‑1 (MQ=255)                                                                                                               aaGCCGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGtt                         <  1:269687/140‑1 (MQ=255)                                                                                                                   cGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCAc                     >  1:546418/1‑140 (MQ=255)                                                                                                                   cGTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCAc                     >  1:1577266/1‑140 (MQ=255)                                                                                                                    gTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACg                    <  2:624736/140‑1 (MQ=255)                                                                                                                    gTTACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACg                    <  2:1428400/140‑1 (MQ=255)                                                                                                                     ttACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGt                   >  2:788186/1‑140 (MQ=255)                                                                                                                      tACCGCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTg                  >  2:153559/1‑140 (MQ=255)                                                                                                                          gCTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGc              <  1:1325188/140‑1 (MQ=255)                                                                                                                           cTATTGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGGATCTCGTTGCACGTGATGcc             >  2:150559/1‑139 (MQ=255)                                                                                                                               tGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACg         >  2:885462/1‑140 (MQ=255)                                                                                                                               tGCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACg         <  2:174226/140‑1 (MQ=255)                                                                                                                                gCTGAAGGTTGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGa        <  2:671535/140‑1 (MQ=255)                                                                                                                                      ggTTGTCGTTAATCACAAAGCGGGTCGCCTTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCa  >  2:671459/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                         TAAAACCACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTCGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCA  >  NC_000913/3822237‑3822509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑