| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,856,300 | Δ1 bp | coding (8/348 nt) | yidH ← | conserved inner membrane protein YidH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,856,298 | 0 | A | . | 94.5% | 350.5 / 18.0 | 91 | coding (10/348 nt) | yidH | conserved inner membrane protein YidH |
| Reads supporting (aligned to +/- strand): ref base A (0/5); new base . (32/54); total (32/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.40e-02 | |||||||||||
ACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAGATGGGTATCATAGCTCAAAATA > NC_000913/3856159‑3856436 | aCGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGa < 1:912586/140‑1 (MQ=255) cGTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAtttt < 1:1117492/140‑1 (MQ=255) cGTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAtttt < 1:865804/140‑1 (MQ=255) gTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGTCGCTTCTCCGAGGCGGGAAttttc < 2:1398793/140‑2 (MQ=255) gTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAttttc < 1:319918/140‑2 (MQ=255) gTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAttttc < 1:253341/140‑2 (MQ=255) gTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTc < 1:951146/140‑1 (MQ=255) gTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTc < 2:776956/140‑1 (MQ=255) tGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCa > 1:922668/1‑140 (MQ=255) tGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCa > 1:907172/1‑140 (MQ=255) tGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCa > 1:1125253/1‑140 (MQ=255) tGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCa < 1:16991/140‑1 (MQ=255) ggCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCAt < 2:1284233/140‑1 (MQ=255) aaTCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCAttgttg < 1:694596/140‑1 (MQ=255) aTCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGc > 1:1184251/1‑140 (MQ=255) aTCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGc > 1:8864/1‑140 (MQ=255) tCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCt < 1:772232/140‑1 (MQ=255) gcgcAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCtt < 1:1252265/140‑1 (MQ=255) cgcAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCttt > 1:822884/1‑140 (MQ=255) aTCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCa > 2:142726/1‑140 (MQ=255) aTCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCa > 2:278104/1‑140 (MQ=255) cAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACt < 1:722000/140‑1 (MQ=255) cAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACt < 1:843186/140‑1 (MQ=255) aaGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTa < 1:1288889/140‑1 (MQ=255) gCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAAc < 2:345188/140‑1 (MQ=255) cccAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑GATTTTCATTGTTGCTCCTTTGCAATTTTCCTAAcc > 2:1350685/1‑139 (MQ=255) cccAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACg > 1:731991/1‑140 (MQ=255) cccAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACg > 1:1190074/1‑140 (MQ=255) aCCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGctct < 2:602865/140‑1 (MQ=255) aCCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGctct < 1:785366/140‑1 (MQ=255) aCCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGctct > 1:646552/1‑140 (MQ=255) aCCCCCGCCACCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGctct < 1:191113/140‑1 (MQ=255) cccccGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTa > 2:437346/1‑140 (MQ=255) cgccgcCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCCTTGTTGCTCCTTTGCCATTTCACTAACGCCCTACCtt > 2:1144762/1‑140 (MQ=255) aGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑t > 2:144337/1‑140 (MQ=255) tACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑CATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTTGCGG‑GTTTTTTCAGAATTTCg > 2:1021363/1‑140 (MQ=255) tACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCg > 2:369111/1‑140 (MQ=255) aCGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGt > 2:221249/1‑140 (MQ=255) aCGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGt > 1:942848/1‑140 (MQ=255) cGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTc < 1:211974/140‑1 (MQ=255) cGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTc < 2:822884/140‑1 (MQ=255) aTCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑GATTTTCATTGTTGCTCCCTTGCCATTTCACTAACGCCCTACCCTTAGCGG‑GTTTTTTTAGAATTTCGTCCGc > 2:983067/1‑140 (MQ=255) aTCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGc > 2:1327079/1‑140 (MQ=255) tCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGcc < 2:731991/140‑1 (MQ=255) ccACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGccc < 2:801190/140‑1 (MQ=255) cACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCg > 2:24948/1‑140 (MQ=255) cACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCg < 1:805094/140‑1 (MQ=255) cGCCAGAAAAGTACGCTCATTAGCCAGTGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGtt > 1:1238481/1‑140 (MQ=255) cGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTTATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGtt > 1:424396/1‑140 (MQ=255) cGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGtt > 2:152964/1‑140 (MQ=255) cGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGtt > 2:1187084/1‑140 (MQ=255) cGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGtt > 1:1064415/1‑140 (MQ=255) cGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGtt < 1:41596/140‑1 (MQ=255) ccAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTc < 1:933207/140‑1 (MQ=255) ccAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTc < 2:628904/140‑1 (MQ=255) gAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTTATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑GTTTTTTAAGAATTTCGTCCGCCCGTTTCCTg > 2:546518/1‑140 (MQ=255) aaaGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGat < 2:264982/140‑1 (MQ=255) aaaGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGat < 2:1376205/140‑1 (MQ=255) aaGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGata < 1:469217/140‑1 (MQ=255) tACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGc > 1:698591/1‑140 (MQ=255) tCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTg < 2:907172/140‑1 (MQ=255) aTTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGcc < 1:1190483/140‑1 (MQ=255) tAGCCAGCGAGGAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑GATTTTCCTTGTTGCTTCTTTGCAATTTCACTAACGCTCTTCCTTTAGGCG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCAt < 2:1229001/140‑1 (MQ=255) tAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTTCCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCAt < 1:409725/140‑1 (MQ=255) tAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAGTTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCAt < 1:1351217/140‑1 (MQ=255) tAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCAt < 1:1157392/140‑1 (MQ=255) tAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCAt < 2:646552/140‑1 (MQ=255) tAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCAt < 2:1064415/140‑1 (MQ=255) aGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATc < 2:8864/140‑1 (MQ=255) ggCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCt < 2:278722/139‑1 (MQ=255) aGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCt < 1:151541/140‑1 (MQ=255) aGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCt < 2:286326/140‑1 (MQ=255) aGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCt < 2:942848/140‑1 (MQ=255) gagaAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACa < 1:1350685/140‑1 (MQ=255) gaAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAag < 1:437346/140‑1 (MQ=255) gaAGCGGTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCCTTATCGG‑TTTTTTTTAGAATTTCGTCCGCCCGGTTCCTGATATGCTTTTGCCATCCGCTACAag > 2:139816/1‑140 (MQ=255) ggTAATCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGt < 1:1144762/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGATGTCAg < 1:24948/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 2:494417/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 2:1203192/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 2:1238115/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 2:922668/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 1:428305/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 1:1327079/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 2:424396/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 1:369111/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 1:221249/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 1:152964/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAg < 1:207352/140‑1 (MQ=255) aaTCAGGCGCTTCTCCGAGG‑GGGGTATTTTTAATGTTTTTCCTTTTGAATTTCACTAATGCTATTCCTTTCACGG‑GTTTTTTTATAATTTTGTTCGGCCCATTCCTGATTTTCTTTTGCCATACGCTAAAGAGAGGTctt > 2:1012186/1‑138 (MQ=255) aTCAGGCGCTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAGa > 2:1063774/1‑140 (MQ=255) cgcTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAGATGGGTa > 2:281182/1‑140 (MQ=255) cgcTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAGATGGGTa > 2:1208009/1‑140 (MQ=255) cTTCTCCGAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAGATGGGTATc > 1:1056912/1‑140 (MQ=255) gAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAGATGGGTATCATAGCTc < 1:1188873/140‑1 (MQ=255) gAGGCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAGATGGGTATCATAGCTc < 1:142726/140‑1 (MQ=255) gCGGG‑AATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGGTTTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAGATGGGTATCATAGCTCaa > 2:548756/1‑140 (MQ=255) ggAAA‑TTTCATTGTTGCTCCTTTTCAATTTCACTAACGCTCTCCCTTTAGCGG‑TTTTTTTAAGAAATTCGTCCACCCGTTTCCCGATATGCTTTTGCCATCCGCTACAAGGAGGGCAGGTGGGTATCATAGGTCaaaata > 2:719385/1‑140 (MQ=255) | ACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTACCTTTAGCGG‑TTTTTTTAAGAATTTCGTCCGCCCGTTTCCTGATATGCTTTTGCCATCCGCTACAAGGAGGTCAGATGGGTATCATAGCTCAAAATA > NC_000913/3856159‑3856436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |