| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 380,022 | (G)10→11 | intergenic (‑141/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,012 | 1 | . | G | 81.4% | 260.1 / 52.8 | 86 | intergenic (‑131/+57) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| Reads supporting (aligned to +/- strand): ref base . (12/4); new base G (53/17); total (65/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
TTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACC > NC_000913/379882‑380146 | ttCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gggg‑gg‑‑ggg > 2:428237/1‑140 (MQ=255)ttCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gggg‑gg‑‑ggg > 2:1400806/1‑140 (MQ=255)ttCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gggg‑gg‑‑ggg > 1:1206362/1‑140 (MQ=255) cACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAA‑TTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gggg‑gg‑‑gggggcta > 1:197705/1‑136 (MQ=255) cccTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gggg‑gg‑‑gggggcta < 2:1400773/139‑5 (MQ=255) cccTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gggg‑gg‑‑gggggcta < 1:297736/139‑5 (MQ=255) gcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGaa > 1:914398/1‑140 (MQ=255) gcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAg > 2:124247/1‑140 (MQ=255) tgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGgc > 1:1306283/1‑140 (MQ=255) atatACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGgccgcc < 1:598307/140‑1 (MQ=255) ataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATG‑GGCGGGAAGGGCCCCCCCGGaag > 1:1292589/1‑138 (MQ=255) taGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAg > 1:114387/1‑140 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑GTAAACGGGCGGGGAAGGCCCCCCGGGaagg > 1:308204/1‑137 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgc > 2:1316356/1‑140 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATA‑CCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcgg > 2:783463/1‑140 (MQ=255) gggggTTTTCTAAATGTTAAAGCATACCCCCCGAAAGTATAAAAAAATGGAGAATTAAATTTTTTCGGTTAATGTGGTCGGAAAACAAAAGGGAAAG‑GGGG‑GG‑‑GGGG‑CTAAAC‑GGCAGGGAAGGCCGCCCCGGATAgcgg < 2:615723/140‑1 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcg > 1:915198/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcgg > 2:1435712/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcgg > 2:1016077/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCCCCCCGGATAgcgg > 1:1104215/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGAGGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcg > 2:571792/1‑140 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑TTAATC‑GGCAGGGAAGGCCCCCCCGGAAAgcgggg > 1:1485189/1‑139 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcgggg > 2:138870/1‑139 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcgggc > 1:243146/1‑140 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcgggc > 2:1310488/1‑140 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcgggc > 2:656130/1‑140 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcgggc > 1:880791/1‑140 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGAGAgcgggc > 1:893072/1‑140 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcgggcg > 2:825889/1‑140 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAgcggggggg > 1:880875/1‑139 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 1:361509/1‑140 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 2:1220886/1‑140 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 1:1215948/1‑140 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CAAATC‑GGCAGGGAAGGCCGCCCCGGAAAccgggcgga > 2:426447/1‑139 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAg > 1:641085/1‑140 (MQ=255) tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAGGaa > 2:61793/1‑140 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCa > 2:1058396/1‑140 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGGAGGTCGCCCCGGATAGCGGGCGGCGGAAGGAGTCAg > 2:1495850/1‑140 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGCGAATGAGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGGAGGGGAAGACGCCCCGGTTTGCGGGCGGCATAAgacaacaa > 2:273690/1‑133 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATT‑GGCGGGGAAGCCCCCCCCCGAAAGCGGGCGGCAAAAGGAAACAGaaa > 2:566462/1‑139 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 2:614373/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 2:931551/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 1:869450/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 1:1153389/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 2:3841/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 1:1235779/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 1:1021737/1‑140 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGAGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑GATATCTGGAAGGGAAGGCCGCCCCGGCTAGCGGGCGGCAAAAGGAAACAAATTTTCTAgtaaa > 2:1044206/1‑136 (MQ=255) tataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa > 2:518984/1‑140 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGGCAGACGGGc > 2:925957/1‑140 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCCCCCCGGGTAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGc > 2:1440738/1‑140 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 2:878073/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GG‑‑GGGG‑CTAATC‑GGCGGGGAAGGCCGCCCCGGATAGCGGGGGGCAGAAGGAATCAGAATTTCCAGGTCAGCCGGGCTGCAAg > 2:1026171/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAGTCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 1:1050845/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 2:282311/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 1:76446/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGGCAGACGGGCTGCAAGt > 2:423017/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGtt > 2:919049/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGCCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 1:693089/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGACGGAAAACAAAGAGGAAA‑‑GGGGAGG‑‑TGTG‑CTAATC‑GGCAGGGAAGGCCGCCCCCGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 2:1326332/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTg > 1:852152/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCGGGGAAGCCCGCCCCGGATAGCGGGCGGCAGAAGGAACAAAAATTTCCAGGACAGACGGGCGGCAAGtgga > 2:188527/1‑137 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:456042/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:1075229/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:673176/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATAAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:164116/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCCCCCCGGAAAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 2:1057506/1‑140 (MQ=255) ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 2:918838/1‑140 (MQ=255) ggAGAATAAAATTTATCCGGGGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa < 1:1310488/140‑1 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:5244/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg > 2:1342558/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg > 1:732488/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg > 1:653031/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGa > 1:1225017/1‑140 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAcc > 1:287639/1‑140 (MQ=255) aaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGAGGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTa < 1:571792/140‑1 (MQ=255) tATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatc < 1:1016077/140‑1 (MQ=255) tATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGGCCTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatc < 1:656130/140‑1 (MQ=255) ttCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatca < 2:251446/139‑1 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatcat < 1:825889/140‑1 (MQ=255) aTCCGGGGAATGTGCGCGGAAAACAAAGAGGAAAGGGGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatc < 2:1206362/140‑1 (MQ=255) tGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGCCGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGt > 2:323759/1‑140 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg < 1:1435712/140‑1 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgg < 2:869450/140‑1 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg < 1:61793/140‑1 (MQ=255) aTGTGGTCGGGAAACAAATGGGAAAGGGGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgg < 2:284597/140‑1 (MQ=255) ggtgGGCGGAAAAAAAAGGGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgggg < 2:1485189/139‑1 (MQ=255) ggggTCGGAAAACAAAGAGGAAAGGGGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgggg < 2:301125/138‑1 (MQ=255) tgGTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 1:1079526/140‑1 (MQ=255) ggTCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtgt < 1:918838/140‑1 (MQ=255) tCGGAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCg > 1:33245/1‑140 (MQ=255) gAAAACAAAGAGGAAAGGGGGG‑GG‑‑GGGG‑CTATCC‑GGCAGGGAAGGCCACCCCGAAAACAGGGGGGCAAACGGCATCAGAATTTCAGGGCCGGCCGGGCTCAAAGTTCGGGACCGTTAAAATCCTCGGTTggggggctgtc > 2:1443582/1‑133 (MQ=255) gAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc > 1:518350/1‑140 (MQ=255) gAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc < 2:914398/140‑1 (MQ=255) gAAAACAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGGCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc > 1:1375025/1‑140 (MQ=255) aaaaCAAAGAGGAAAGGGGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc < 2:915198/140‑1 (MQ=255) aaaCAAAGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACca < 2:243146/140‑1 (MQ=255) aaaggggaaag‑gggG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACt < 1:1400806/140‑1 (MQ=255) aaGAGGAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACtt < 1:566462/140‑1 (MQ=255) ggAAAG‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCGGGGAAGGCCCCCCCGGATGGCGGGGGGCAGAAGGAATCAGAATTTCCGGGTCGGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGGCGGACCACCCTTTccc > 2:1498285/1‑140 (MQ=255) | TTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GG‑‑GGGG‑CTAATC‑GGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACC > NC_000913/379882‑380146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |